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PMC:3320587 / 21097-21297 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T8280 194-199 NN denotes hours
T8279 191-193 CD denotes 48
T8278 187-190 CC denotes and
T8277 184-186 CD denotes 24
T8276 181-183 IN denotes at
T8271 144-150 NN denotes levels
T8270 133-143 NN denotes expression
T8269 128-132 NN denotes gene
T8268 122-127 NN denotes NFAT5
T8267 113-121 VB denotes measured
T8266 109-112 CC denotes and
T8265 107-108 -COMMA- denotes ,
T8264 95-107 JJ denotes unstimulated
T8263 90-94 PRP denotes them
T8262 85-89 VB denotes left
T8261 82-84 CC denotes or
T8260 75-81 NN denotes lysate
T8259 71-74 NN denotes MTb
T8258 67-70 DT denotes the
T8257 62-66 IN denotes with
T8256 56-61 NN denotes cells
T8255 52-55 DT denotes the
T8254 41-51 VB denotes stimulated
T8253 39-40 -COMMA- denotes ,
T8252 33-39 NN denotes donors
T8251 26-32 JJ denotes normal
T8250 21-25 CD denotes five
T8249 16-20 IN denotes from
T8248 12-15 NN denotes MDM
T8247 3-11 VB denotes prepared
T8246 0-2 PRP denotes We
T8275 177-180 NN denotes PCR
T8274 167-176 JJ denotes real-time
T8273 154-166 JJ denotes quantitative
T8272 151-153 IN denotes by
R6559 T8246 T8247 arg1Of We,prepared
R6560 T8246 T8254 arg1Of We,stimulated
R6561 T8246 T8262 arg1Of We,left
R6562 T8246 T8267 arg1Of We,measured
R6563 T8247 T8249 arg1Of prepared,from
R6564 T8247 T8253 arg1Of prepared,","
R6565 T8248 T8247 arg2Of MDM,prepared
R6566 T8252 T8249 arg2Of donors,from
R6567 T8252 T8250 arg1Of donors,five
R6568 T8252 T8251 arg1Of donors,normal
R6569 T8253 T8261 arg1Of ",",or
R6570 T8254 T8253 arg2Of stimulated,","
R6571 T8254 T8257 arg1Of stimulated,with
R6572 T8256 T8254 arg2Of cells,stimulated
R6573 T8256 T8255 arg1Of cells,the
R6574 T8260 T8257 arg2Of lysate,with
R6575 T8260 T8258 arg1Of lysate,the
R6576 T8260 T8259 arg1Of lysate,MTb
R6577 T8261 T8266 arg1Of or,and
R6578 T8262 T8261 arg2Of left,or
R6579 T8263 T8262 arg2Of them,left
R6580 T8264 T8262 arg3Of unstimulated,left
R6581 T8266 T8265 arg1Of and,","
R6582 T8267 T8266 arg2Of measured,and
R6583 T8267 T8272 arg1Of measured,by
R6584 T8271 T8267 arg2Of levels,measured
R6585 T8271 T8268 arg1Of levels,NFAT5
R6586 T8271 T8269 arg1Of levels,gene
R6587 T8271 T8270 arg1Of levels,expression
R6588 T8275 T8272 arg2Of PCR,by
R6589 T8275 T8273 arg1Of PCR,quantitative
R6590 T8275 T8274 arg1Of PCR,real-time
R6591 T8275 T8276 arg1Of PCR,at
R6592 T8277 T8278 arg1Of 24,and
R6593 T8279 T8278 arg2Of 48,and
R6594 T8280 T8276 arg2Of hours,at
R6595 T8280 T8277 arg1Of hours,24
R6596 T8280 T8279 arg1Of hours,48

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T8157 122-127 Protein denotes NFAT5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T8399 122-127 http://www.uniprot.org/uniprot/O94916 denotes NFAT5

GO-BP

Id Subject Object Predicate Lexical cue
T8162 128-143 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression

GO-CC

Id Subject Object Predicate Lexical cue
T8165 56-61 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T8131 0-200 Sentence denotes We prepared MDM from five normal donors, stimulated the cells with the MTb lysate or left them unstimulated, and measured NFAT5 gene expression levels by quantitative real-time PCR at 24 and 48 hours.
T134 0-200 Sentence denotes We prepared MDM from five normal donors, stimulated the cells with the MTb lysate or left them unstimulated, and measured NFAT5 gene expression levels by quantitative real-time PCR at 24 and 48 hours.

simple1

Id Subject Object Predicate Lexical cue
T8189 122-127 Protein denotes NFAT5

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T8702 133-143 Gene_expression denotes expression
T8693 122-127 Protein denotes NFAT5
R6970 T8693 T8702 themeOf NFAT5,expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T8442 133-143 Gene_expression denotes expression
T8433 122-127 Protein denotes NFAT5
R6733 T8433 T8442 themeOf NFAT5,expression

DLUT931

Id Subject Object Predicate Lexical cue
T8422 133-143 Gene_expression denotes expression
T8413 122-127 Protein denotes NFAT5
R6719 T8413 T8422 themeOf NFAT5,expression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T8738 122-199 Gene_expression denotes NFAT5 gene expression levels by quantitative real-time PCR at 24 and 48 hours
T8735 12-15 Protein denotes MDM
T8720 71-74 Protein denotes MTb
T8717 122-127 Protein denotes NFAT5
T8711 52-61 Entity denotes the cells
R6982 T8717 T8738 themeOf NFAT5,NFAT5 gene expression levels by quantitative real-time PCR at 24 and 48 hours

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T8571 199-200 . denotes .
T8570 194-199 NNS denotes hours
T8569 191-193 CD denotes 48
T8568 187-190 CC denotes and
T8567 184-186 CD denotes 24
T8566 181-183 IN denotes at
T8565 177-180 NNP denotes PCR
T8564 167-176 JJ denotes real-time
T8563 154-166 JJ denotes quantitative
T8562 151-153 IN denotes by
T8561 144-150 NNS denotes levels
T8560 133-143 NN denotes expression
T8559 128-132 NN denotes gene
T8558 122-127 NNP denotes NFAT5
T8557 113-121 VBN denotes measured
T8556 109-112 CC denotes and
T8555 107-108 , denotes ,
T8554 95-107 JJ denotes unstimulated
T8553 90-94 PRP denotes them
T8552 85-89 VBD denotes left
T8551 82-84 CC denotes or
T8550 75-81 NN denotes lysate
T8549 71-74 NNP denotes MTb
T8548 67-70 DT denotes the
T8547 62-66 IN denotes with
T8546 56-61 NNS denotes cells
T8545 52-55 DT denotes the
T8544 41-51 VBD denotes stimulated
T8543 39-40 , denotes ,
T8542 33-39 NNS denotes donors
T8541 26-32 JJ denotes normal
T8540 21-25 CD denotes five
T8539 16-20 IN denotes from
T8538 12-15 NNP denotes MDM
T8537 3-11 VBD denotes prepared
T8536 0-2 PRP denotes We
R6812 T8536 T8537 nsubj We,prepared
R6813 T8537 T8537 ROOT prepared,prepared
R6814 T8538 T8537 dobj MDM,prepared
R6815 T8539 T8537 prep from,prepared
R6816 T8540 T8542 nummod five,donors
R6817 T8541 T8542 amod normal,donors
R6818 T8542 T8539 pobj donors,from
R6819 T8543 T8544 punct ",",stimulated
R6820 T8544 T8537 conj stimulated,prepared
R6821 T8545 T8546 det the,cells
R6822 T8546 T8544 dobj cells,stimulated
R6823 T8547 T8544 prep with,stimulated
R6824 T8548 T8550 det the,lysate
R6825 T8549 T8550 compound MTb,lysate
R6826 T8550 T8547 pobj lysate,with
R6827 T8551 T8544 cc or,stimulated
R6828 T8552 T8544 conj left,stimulated
R6829 T8553 T8552 dobj them,left
R6830 T8554 T8552 oprd unstimulated,left
R6831 T8555 T8552 punct ",",left
R6832 T8556 T8552 cc and,left
R6833 T8557 T8552 conj measured,left
R6834 T8558 T8561 compound NFAT5,levels
R6835 T8559 T8560 compound gene,expression
R6836 T8560 T8561 compound expression,levels
R6837 T8561 T8557 dobj levels,measured
R6838 T8562 T8557 prep by,measured
R6839 T8563 T8565 amod quantitative,PCR
R6840 T8564 T8565 amod real-time,PCR
R6841 T8565 T8562 pobj PCR,by
R6842 T8566 T8557 prep at,measured
R6843 T8567 T8570 nummod 24,hours
R6844 T8568 T8567 cc and,24
R6845 T8569 T8567 conj 48,24
R6846 T8570 T8566 pobj hours,at
R6847 T8571 T8537 punct .,prepared

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T8176 133-143 Gene_expression denotes expression
T8175 122-132 Protein denotes NFAT5 gene
T8174 12-15 Protein denotes MDM
R6500 T8175 T8176 themeOf NFAT5 gene,expression

testone

Id Subject Object Predicate Lexical cue
T8099 122-127 Protein denotes NFAT5

test3

Id Subject Object Predicate Lexical cue
T8122 122-127 Protein denotes NFAT5
T8114 122-127 Protein denotes NFAT5