PMC:3320587 / 172-431
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T230 | 249-251 | PRP | denotes | we |
T229 | 247-248 | -COMMA- | denotes | , |
T228 | 243-247 | RB | denotes | Here |
T227 | 237-241 | NN | denotes | load |
T226 | 231-236 | JJ | denotes | viral |
T225 | 228-230 | IN | denotes | in |
T224 | 219-227 | NN | denotes | increase |
T223 | 216-218 | DT | denotes | an |
T222 | 213-215 | TO | denotes | to |
T221 | 205-212 | VB | denotes | leading |
T220 | 203-204 | -COMMA- | denotes | , |
T219 | 192-203 | NN | denotes | replication |
T218 | 186-191 | NN | denotes | HIV-1 |
T217 | 176-185 | VB | denotes | stimulate |
T216 | 171-175 | WDT | denotes | that |
T215 | 162-170 | NN | denotes | cascades |
T214 | 152-161 | NN | denotes | signaling |
T213 | 145-151 | JJ | denotes | immune |
T212 | 136-144 | JJ | denotes | adaptive |
T211 | 132-135 | CC | denotes | and |
T210 | 125-131 | JJ | denotes | innate |
T209 | 114-124 | VB | denotes | activating |
T195 | 22-34 | NN | denotes | Tuberculosis |
T196 | 35-36 | -LRB- | denotes | ( |
T197 | 36-38 | NN | denotes | TB |
T198 | 38-39 | -RRB- | denotes | ) |
T199 | 40-47 | NN | denotes | disease |
T200 | 48-50 | IN | denotes | in |
T201 | 51-54 | NN | denotes | HIV |
T202 | 55-66 | JJ | denotes | co-infected |
T203 | 67-75 | NN | denotes | patients |
T204 | 76-87 | VB | denotes | contributes |
T205 | 88-90 | TO | denotes | to |
T206 | 91-100 | VB | denotes | increased |
T207 | 101-110 | NN | denotes | mortality |
T208 | 111-113 | IN | denotes | by |
R45 | T215 | T214 | arg1Of | cascades,signaling |
R46 | T215 | T216 | arg1Of | cascades,that |
R47 | T215 | T217 | arg1Of | cascades,stimulate |
R48 | T217 | T220 | arg1Of | stimulate,"," |
R49 | T217 | T221 | modOf | stimulate,leading |
R50 | T219 | T217 | arg2Of | replication,stimulate |
R51 | T219 | T218 | arg1Of | replication,HIV-1 |
R52 | T221 | T222 | arg1Of | leading,to |
R53 | T224 | T222 | arg2Of | increase,to |
R54 | T224 | T223 | arg1Of | increase,an |
R55 | T224 | T225 | arg1Of | increase,in |
R56 | T227 | T225 | arg2Of | load,in |
R57 | T227 | T226 | arg1Of | load,viral |
R38 | T209 | T208 | arg2Of | activating,by |
R39 | T210 | T211 | arg1Of | innate,and |
R40 | T212 | T211 | arg2Of | adaptive,and |
R41 | T215 | T209 | arg2Of | cascades,activating |
R42 | T215 | T210 | arg1Of | cascades,innate |
R43 | T215 | T212 | arg1Of | cascades,adaptive |
R44 | T215 | T213 | arg1Of | cascades,immune |
R486 | T195 | T196 | arg1Of | Tuberculosis,( |
R487 | T197 | T196 | arg2Of | TB,( |
R488 | T198 | T196 | arg3Of | ),( |
R489 | T199 | T195 | arg1Of | disease,Tuberculosis |
R490 | T199 | T200 | arg1Of | disease,in |
R491 | T199 | T204 | arg1Of | disease,contributes |
R492 | T199 | T209 | arg1Of | disease,activating |
R493 | T203 | T200 | arg2Of | patients,in |
R494 | T203 | T201 | arg1Of | patients,HIV |
R495 | T203 | T202 | arg1Of | patients,co-infected |
R496 | T204 | T205 | arg1Of | contributes,to |
R497 | T204 | T208 | arg1Of | contributes,by |
R498 | T207 | T205 | arg2Of | mortality,to |
R499 | T207 | T206 | arg2Of | mortality,increased |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T102 | 152-170 | http://purl.obolibrary.org/obo/GO_0007165 | denotes | signaling cascades |
T100 | 152-161 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T58 | 22-242 | Sentence | denotes | Tuberculosis (TB) disease in HIV co-infected patients contributes to increased mortality by activating innate and adaptive immune signaling cascades that stimulate HIV-1 replication, leading to an increase in viral load. |
T3 | 13-21 | Sentence | denotes | Abstract |
T4 | 22-242 | Sentence | denotes | Tuberculosis (TB) disease in HIV co-infected patients contributes to increased mortality by activating innate and adaptive immune signaling cascades that stimulate HIV-1 replication, leading to an increase in viral load. |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T567 | 249-251 | PRP | denotes | we |
T566 | 247-248 | , | denotes | , |
T565 | 243-247 | RB | denotes | Here |
T564 | 241-242 | . | denotes | . |
T563 | 237-241 | NN | denotes | load |
T562 | 231-236 | JJ | denotes | viral |
T561 | 228-230 | IN | denotes | in |
T560 | 219-227 | NN | denotes | increase |
T559 | 216-218 | DT | denotes | an |
T558 | 213-215 | TO | denotes | to |
T557 | 205-212 | VBG | denotes | leading |
T556 | 203-204 | , | denotes | , |
T555 | 192-203 | NN | denotes | replication |
T554 | 186-191 | JJ | denotes | HIV-1 |
T553 | 176-185 | VBP | denotes | stimulate |
T552 | 171-175 | WDT | denotes | that |
T551 | 162-170 | NNS | denotes | cascades |
T550 | 152-161 | VBG | denotes | signaling |
T549 | 145-151 | JJ | denotes | immune |
T548 | 136-144 | JJ | denotes | adaptive |
T547 | 132-135 | CC | denotes | and |
T546 | 125-131 | NN | denotes | innate |
T545 | 114-124 | VBG | denotes | activating |
T544 | 111-113 | IN | denotes | by |
T543 | 101-110 | NN | denotes | mortality |
T542 | 91-100 | VBN | denotes | increased |
T541 | 88-90 | TO | denotes | to |
T540 | 76-87 | VBZ | denotes | contributes |
T539 | 67-75 | NNS | denotes | patients |
T538 | 55-66 | VBD | denotes | co-infected |
T537 | 51-54 | NNP | denotes | HIV |
T536 | 48-50 | IN | denotes | in |
T535 | 40-47 | NN | denotes | disease |
T534 | 38-39 | -RRB- | denotes | ) |
T533 | 36-38 | NN | denotes | TB |
T532 | 35-36 | -LRB- | denotes | ( |
T531 | 22-34 | NNP | denotes | Tuberculosis |
R285 | T532 | T531 | punct | (,Tuberculosis |
R286 | T533 | T531 | appos | TB,Tuberculosis |
R287 | T534 | T531 | punct | ),Tuberculosis |
R289 | T536 | T535 | prep | in,disease |
R290 | T537 | T536 | pobj | HIV,in |
R291 | T538 | T539 | amod | co-infected,patients |
R294 | T541 | T540 | prep | to,contributes |
R295 | T542 | T543 | amod | increased,mortality |
R296 | T543 | T541 | pobj | mortality,to |
R297 | T544 | T540 | prep | by,contributes |
R298 | T545 | T544 | pcomp | activating,by |
R299 | T546 | T545 | dobj | innate,activating |
R300 | T547 | T546 | cc | and,innate |
R301 | T548 | T550 | amod | adaptive,signaling |
R302 | T549 | T550 | amod | immune,signaling |
R303 | T550 | T545 | conj | signaling,activating |
R304 | T551 | T550 | dobj | cascades,signaling |
R305 | T552 | T553 | nsubj | that,stimulate |
R306 | T553 | T551 | relcl | stimulate,cascades |
R307 | T554 | T555 | compound | HIV-1,replication |
R308 | T555 | T553 | dobj | replication,stimulate |
R309 | T556 | T550 | punct | ",",signaling |
R310 | T557 | T550 | conj | leading,signaling |
R311 | T558 | T557 | prep | to,leading |
R312 | T559 | T560 | det | an,increase |
R313 | T560 | T558 | pobj | increase,to |
R314 | T561 | T560 | prep | in,increase |
R315 | T562 | T563 | amod | viral,load |
R316 | T563 | T561 | pobj | load,in |