PMC:3320587 / 12914-13022
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5678 | 102-107 | NN | denotes | phase |
| T5677 | 95-101 | NN | denotes | growth |
| T5676 | 83-94 | JJ | denotes | logarithmic |
| T5675 | 79-82 | DT | denotes | the |
| T5674 | 76-78 | IN | denotes | in |
| T5673 | 71-75 | VB | denotes | were |
| T5672 | 66-70 | PRP | denotes | they |
| T5671 | 61-65 | IN | denotes | that |
| T5670 | 54-60 | VB | denotes | ensure |
| T5669 | 51-53 | TO | denotes | to |
| T5668 | 46-50 | NN | denotes | 37°C |
| T5667 | 43-45 | IN | denotes | at |
| T5666 | 39-42 | CD | denotes | 0.4 |
| T5665 | 36-38 | IN | denotes | of |
| T5664 | 30-35 | NN | denotes | OD650 |
| T5663 | 27-29 | DT | denotes | an |
| T5662 | 24-26 | TO | denotes | to |
| T5661 | 18-23 | VB | denotes | grown |
| T5660 | 13-17 | VB | denotes | were |
| T5659 | 4-12 | NN | denotes | cultures |
| T5658 | 0-3 | DT | denotes | The |
| R4457 | T5659 | T5658 | arg1Of | cultures,The |
| R4458 | T5659 | T5660 | arg1Of | cultures,were |
| R4459 | T5659 | T5661 | arg2Of | cultures,grown |
| R4460 | T5659 | T5670 | arg1Of | cultures,ensure |
| R4461 | T5661 | T5660 | arg2Of | grown,were |
| R4462 | T5661 | T5662 | arg1Of | grown,to |
| R4463 | T5661 | T5667 | arg1Of | grown,at |
| R4464 | T5661 | T5669 | modOf | grown,to |
| R4465 | T5664 | T5662 | arg2Of | OD650,to |
| R4466 | T5664 | T5663 | arg1Of | OD650,an |
| R4467 | T5664 | T5665 | arg1Of | OD650,of |
| R4468 | T5666 | T5665 | arg2Of | 0.4,of |
| R4469 | T5668 | T5667 | arg2Of | 37°C,at |
| R4470 | T5670 | T5669 | arg1Of | ensure,to |
| R4471 | T5672 | T5673 | arg1Of | they,were |
| R4472 | T5672 | T5674 | arg1Of | they,in |
| R4473 | T5673 | T5670 | arg2Of | were,ensure |
| R4474 | T5673 | T5671 | arg1Of | were,that |
| R4475 | T5674 | T5673 | arg2Of | in,were |
| R4476 | T5678 | T5674 | arg2Of | phase,in |
| R4477 | T5678 | T5675 | arg1Of | phase,the |
| R4478 | T5678 | T5676 | arg1Of | phase,logarithmic |
| R4479 | T5678 | T5677 | arg1Of | phase,growth |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5606 | 95-101 | http://purl.obolibrary.org/obo/GO_0040007 | denotes | growth |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5602 | 0-108 | Sentence | denotes | The cultures were grown to an OD650 of 0.4 at 37°C to ensure that they were in the logarithmic growth phase. |
| T79 | 0-108 | Sentence | denotes | The cultures were grown to an OD650 of 0.4 at 37°C to ensure that they were in the logarithmic growth phase. |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5856 | 107-108 | . | denotes | . |
| T5855 | 102-107 | NN | denotes | phase |
| T5854 | 95-101 | NN | denotes | growth |
| T5853 | 83-94 | JJ | denotes | logarithmic |
| T5852 | 79-82 | DT | denotes | the |
| T5851 | 76-78 | IN | denotes | in |
| T5850 | 71-75 | VBD | denotes | were |
| T5849 | 66-70 | PRP | denotes | they |
| T5848 | 61-65 | IN | denotes | that |
| T5847 | 54-60 | VB | denotes | ensure |
| T5846 | 51-53 | TO | denotes | to |
| T5845 | 49-50 | NNP | denotes | C |
| T5844 | 48-49 | CD | denotes | ° |
| T5843 | 46-48 | CD | denotes | 37 |
| T5842 | 43-45 | IN | denotes | at |
| T5841 | 39-42 | CD | denotes | 0.4 |
| T5840 | 36-38 | IN | denotes | of |
| T5839 | 30-35 | NNP | denotes | OD650 |
| T5838 | 27-29 | DT | denotes | an |
| T5837 | 24-26 | TO | denotes | to |
| T5836 | 18-23 | VBN | denotes | grown |
| T5835 | 13-17 | VBD | denotes | were |
| T5834 | 4-12 | NNS | denotes | cultures |
| T5833 | 0-3 | DT | denotes | The |
| R4632 | T5833 | T5834 | det | The,cultures |
| R4633 | T5834 | T5836 | nsubjpass | cultures,grown |
| R4634 | T5835 | T5836 | auxpass | were,grown |
| R4635 | T5836 | T5836 | ROOT | grown,grown |
| R4636 | T5837 | T5836 | prep | to,grown |
| R4637 | T5838 | T5839 | det | an,OD650 |
| R4638 | T5839 | T5837 | pobj | OD650,to |
| R4639 | T5840 | T5839 | prep | of,OD650 |
| R4640 | T5841 | T5840 | pobj | 0.4,of |
| R4641 | T5842 | T5836 | prep | at,grown |
| R4642 | T5843 | T5844 | nummod | 37,° |
| R4643 | T5844 | T5845 | nummod | °,C |
| R4644 | T5845 | T5842 | pobj | C,at |
| R4645 | T5846 | T5847 | aux | to,ensure |
| R4646 | T5847 | T5836 | advcl | ensure,grown |
| R4647 | T5848 | T5850 | mark | that,were |
| R4648 | T5849 | T5850 | nsubj | they,were |
| R4649 | T5850 | T5847 | ccomp | were,ensure |
| R4650 | T5851 | T5850 | prep | in,were |
| R4651 | T5852 | T5855 | det | the,phase |
| R4652 | T5853 | T5855 | amod | logarithmic,phase |
| R4653 | T5854 | T5855 | compound | growth,phase |
| R4654 | T5855 | T5851 | pobj | phase,in |
| R4655 | T5856 | T5836 | punct | .,grown |