PMC:3320587 / 116-427
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T230 | 305-307 | PRP | denotes | we |
| T229 | 303-304 | -COMMA- | denotes | , |
| T228 | 299-303 | RB | denotes | Here |
| T227 | 293-297 | NN | denotes | load |
| T226 | 287-292 | JJ | denotes | viral |
| T225 | 284-286 | IN | denotes | in |
| T224 | 275-283 | NN | denotes | increase |
| T223 | 272-274 | DT | denotes | an |
| T222 | 269-271 | TO | denotes | to |
| T221 | 261-268 | VB | denotes | leading |
| T220 | 259-260 | -COMMA- | denotes | , |
| T219 | 248-259 | NN | denotes | replication |
| T218 | 242-247 | NN | denotes | HIV-1 |
| T217 | 232-241 | VB | denotes | stimulate |
| T216 | 227-231 | WDT | denotes | that |
| T215 | 218-226 | NN | denotes | cascades |
| T214 | 208-217 | NN | denotes | signaling |
| T213 | 201-207 | JJ | denotes | immune |
| T212 | 192-200 | JJ | denotes | adaptive |
| T211 | 188-191 | CC | denotes | and |
| T210 | 181-187 | JJ | denotes | innate |
| T209 | 170-180 | VB | denotes | activating |
| T193 | 1-9 | NN | denotes | Receptor |
| T194 | 10-17 | NN | denotes | Pathway |
| T195 | 78-90 | NN | denotes | Tuberculosis |
| T196 | 91-92 | -LRB- | denotes | ( |
| T197 | 92-94 | NN | denotes | TB |
| T198 | 94-95 | -RRB- | denotes | ) |
| T199 | 96-103 | NN | denotes | disease |
| T200 | 104-106 | IN | denotes | in |
| T201 | 107-110 | NN | denotes | HIV |
| T202 | 111-122 | JJ | denotes | co-infected |
| T203 | 123-131 | NN | denotes | patients |
| T204 | 132-143 | VB | denotes | contributes |
| T205 | 144-146 | TO | denotes | to |
| T206 | 147-156 | VB | denotes | increased |
| T207 | 157-166 | NN | denotes | mortality |
| T208 | 167-169 | IN | denotes | by |
| R45 | T215 | T214 | arg1Of | cascades,signaling |
| R46 | T215 | T216 | arg1Of | cascades,that |
| R47 | T215 | T217 | arg1Of | cascades,stimulate |
| R48 | T217 | T220 | arg1Of | stimulate,"," |
| R49 | T217 | T221 | modOf | stimulate,leading |
| R50 | T219 | T217 | arg2Of | replication,stimulate |
| R51 | T219 | T218 | arg1Of | replication,HIV-1 |
| R52 | T221 | T222 | arg1Of | leading,to |
| R53 | T224 | T222 | arg2Of | increase,to |
| R54 | T224 | T223 | arg1Of | increase,an |
| R55 | T224 | T225 | arg1Of | increase,in |
| R56 | T227 | T225 | arg2Of | load,in |
| R57 | T227 | T226 | arg1Of | load,viral |
| R38 | T209 | T208 | arg2Of | activating,by |
| R39 | T210 | T211 | arg1Of | innate,and |
| R40 | T212 | T211 | arg2Of | adaptive,and |
| R41 | T215 | T209 | arg2Of | cascades,activating |
| R42 | T215 | T210 | arg1Of | cascades,innate |
| R43 | T215 | T212 | arg1Of | cascades,adaptive |
| R44 | T215 | T213 | arg1Of | cascades,immune |
| R485 | T194 | T193 | arg1Of | Pathway,Receptor |
| R486 | T195 | T196 | arg1Of | Tuberculosis,( |
| R487 | T197 | T196 | arg2Of | TB,( |
| R488 | T198 | T196 | arg3Of | ),( |
| R489 | T199 | T195 | arg1Of | disease,Tuberculosis |
| R490 | T199 | T200 | arg1Of | disease,in |
| R491 | T199 | T204 | arg1Of | disease,contributes |
| R492 | T199 | T209 | arg1Of | disease,activating |
| R493 | T203 | T200 | arg2Of | patients,in |
| R494 | T203 | T201 | arg1Of | patients,HIV |
| R495 | T203 | T202 | arg1Of | patients,co-infected |
| R496 | T204 | T205 | arg1Of | contributes,to |
| R497 | T204 | T208 | arg1Of | contributes,by |
| R498 | T207 | T205 | arg2Of | mortality,to |
| R499 | T207 | T206 | arg2Of | mortality,increased |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T102 | 208-226 | http://purl.obolibrary.org/obo/GO_0007165 | denotes | signaling cascades |
| T100 | 208-217 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T58 | 78-298 | Sentence | denotes | Tuberculosis (TB) disease in HIV co-infected patients contributes to increased mortality by activating innate and adaptive immune signaling cascades that stimulate HIV-1 replication, leading to an increase in viral load. |
| T2 | 18-67 | Sentence | denotes | NFAT5 Modulation of MTb-Induced HIV-1 Replication |
| T3 | 69-77 | Sentence | denotes | Abstract |
| T4 | 78-298 | Sentence | denotes | Tuberculosis (TB) disease in HIV co-infected patients contributes to increased mortality by activating innate and adaptive immune signaling cascades that stimulate HIV-1 replication, leading to an increase in viral load. |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T529 | 1-9 | NNP | denotes | Receptor |
| T530 | 10-17 | NNP | denotes | Pathway |
| T567 | 305-307 | PRP | denotes | we |
| T566 | 303-304 | , | denotes | , |
| T565 | 299-303 | RB | denotes | Here |
| T564 | 297-298 | . | denotes | . |
| T563 | 293-297 | NN | denotes | load |
| T562 | 287-292 | JJ | denotes | viral |
| T561 | 284-286 | IN | denotes | in |
| T560 | 275-283 | NN | denotes | increase |
| T559 | 272-274 | DT | denotes | an |
| T558 | 269-271 | TO | denotes | to |
| T557 | 261-268 | VBG | denotes | leading |
| T556 | 259-260 | , | denotes | , |
| T555 | 248-259 | NN | denotes | replication |
| T554 | 242-247 | JJ | denotes | HIV-1 |
| T553 | 232-241 | VBP | denotes | stimulate |
| T552 | 227-231 | WDT | denotes | that |
| T551 | 218-226 | NNS | denotes | cascades |
| T550 | 208-217 | VBG | denotes | signaling |
| T549 | 201-207 | JJ | denotes | immune |
| T548 | 192-200 | JJ | denotes | adaptive |
| T547 | 188-191 | CC | denotes | and |
| T546 | 181-187 | NN | denotes | innate |
| T545 | 170-180 | VBG | denotes | activating |
| T544 | 167-169 | IN | denotes | by |
| T543 | 157-166 | NN | denotes | mortality |
| T542 | 147-156 | VBN | denotes | increased |
| T541 | 144-146 | TO | denotes | to |
| T540 | 132-143 | VBZ | denotes | contributes |
| T539 | 123-131 | NNS | denotes | patients |
| T538 | 111-122 | VBD | denotes | co-infected |
| T537 | 107-110 | NNP | denotes | HIV |
| T536 | 104-106 | IN | denotes | in |
| T535 | 96-103 | NN | denotes | disease |
| T534 | 94-95 | -RRB- | denotes | ) |
| T533 | 92-94 | NN | denotes | TB |
| T532 | 91-92 | -LRB- | denotes | ( |
| T531 | 78-90 | NNP | denotes | Tuberculosis |
| R282 | T529 | T531 | compound | Receptor,Tuberculosis |
| R283 | T530 | T531 | compound | Pathway,Tuberculosis |
| R285 | T532 | T531 | punct | (,Tuberculosis |
| R286 | T533 | T531 | appos | TB,Tuberculosis |
| R287 | T534 | T531 | punct | ),Tuberculosis |
| R289 | T536 | T535 | prep | in,disease |
| R290 | T537 | T536 | pobj | HIV,in |
| R291 | T538 | T539 | amod | co-infected,patients |
| R294 | T541 | T540 | prep | to,contributes |
| R295 | T542 | T543 | amod | increased,mortality |
| R296 | T543 | T541 | pobj | mortality,to |
| R297 | T544 | T540 | prep | by,contributes |
| R298 | T545 | T544 | pcomp | activating,by |
| R299 | T546 | T545 | dobj | innate,activating |
| R300 | T547 | T546 | cc | and,innate |
| R301 | T548 | T550 | amod | adaptive,signaling |
| R302 | T549 | T550 | amod | immune,signaling |
| R303 | T550 | T545 | conj | signaling,activating |
| R304 | T551 | T550 | dobj | cascades,signaling |
| R305 | T552 | T553 | nsubj | that,stimulate |
| R306 | T553 | T551 | relcl | stimulate,cascades |
| R307 | T554 | T555 | compound | HIV-1,replication |
| R308 | T555 | T553 | dobj | replication,stimulate |
| R309 | T556 | T550 | punct | ",",signaling |
| R310 | T557 | T550 | conj | leading,signaling |
| R311 | T558 | T557 | prep | to,leading |
| R312 | T559 | T560 | det | an,increase |
| R313 | T560 | T558 | pobj | increase,to |
| R314 | T561 | T560 | prep | in,increase |
| R315 | T562 | T563 | amod | viral,load |
| R316 | T563 | T561 | pobj | load,in |