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PMC:3320587 / 1114-1356 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T386 238-241 IN denotes via
T385 226-237 NN denotes replication
T384 220-225 NN denotes HIV-1
T383 217-219 IN denotes of
T382 206-216 NN denotes regulation
T381 202-205 NN denotes MTb
T380 199-201 IN denotes in
T379 194-198 NN denotes role
T378 186-193 JJ denotes crucial
T377 184-185 DT denotes a
T376 178-183 VB denotes plays
T375 172-177 NN denotes NFAT5
T374 168-171 CC denotes and
T373 166-167 -COMMA- denotes ,
T372 156-166 NN denotes expression
T371 148-155 NN denotes protein
T370 144-147 CC denotes and
T369 139-143 NN denotes gene
T368 133-138 NN denotes NFAT5
T367 125-132 VB denotes induces
T366 115-124 NN denotes infection
T365 111-114 NN denotes MTb
T364 108-110 TO denotes to
T363 99-107 NN denotes response
T362 92-98 JJ denotes immune
T361 85-91 JJ denotes innate
T360 81-84 DT denotes the
T359 79-80 -COMMA- denotes ,
T358 75-79 RB denotes Thus
T357 63-73 NN denotes expression
T356 58-62 NN denotes gene
T355 52-57 NN denotes NFAT5
T354 40-51 JJ denotes MTb-induced
T353 31-39 VB denotes inhibits
T352 17-30 RB denotes significantly
T351 15-16 -COMMA- denotes ,
T350 10-15 NN denotes TRAF6
T349 6-9 CC denotes and
T348 4-5 -COMMA- denotes ,
R178 T349 T348 arg1Of and,","
R179 T350 T349 arg2Of TRAF6,and
R182 T353 T351 arg1Of inhibits,","
R183 T353 T352 arg1Of inhibits,significantly
R184 T357 T353 arg2Of expression,inhibits
R185 T357 T354 arg1Of expression,MTb-induced
R186 T357 T355 arg1Of expression,NFAT5
R187 T357 T356 arg1Of expression,gene
R188 T363 T360 arg1Of response,the
R189 T363 T361 arg1Of response,innate
R190 T363 T362 arg1Of response,immune
R191 T363 T364 arg1Of response,to
R192 T363 T367 arg1Of response,induces
R193 T366 T364 arg2Of infection,to
R194 T366 T365 arg1Of infection,MTb
R195 T367 T358 arg1Of induces,Thus
R196 T367 T359 arg1Of induces,","
R197 T367 T374 arg1Of induces,and
R198 T369 T370 arg1Of gene,and
R199 T371 T370 arg2Of protein,and
R200 T372 T367 arg2Of expression,induces
R201 T372 T368 arg1Of expression,NFAT5
R202 T372 T369 arg1Of expression,gene
R203 T372 T371 arg1Of expression,protein
R204 T374 T373 arg1Of and,","
R205 T375 T376 arg1Of NFAT5,plays
R206 T376 T374 arg2Of plays,and
R207 T376 T380 arg1Of plays,in
R208 T376 T386 arg1Of plays,via
R209 T379 T376 arg2Of role,plays
R210 T379 T377 arg1Of role,a
R211 T379 T378 arg1Of role,crucial
R212 T382 T380 arg2Of regulation,in
R213 T382 T381 arg1Of regulation,MTb
R214 T382 T383 arg1Of regulation,of
R215 T385 T383 arg2Of replication,of
R216 T385 T384 arg1Of replication,HIV-1

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T91 10-15 Protein denotes TRAF6
T92 52-57 Protein denotes NFAT5
T93 133-138 Protein denotes NFAT5
T94 172-177 Protein denotes NFAT5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T415 52-57 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T416 133-138 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T417 172-177 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T420 10-15 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6

GO-BP

Id Subject Object Predicate Lexical cue
T111 85-107 http://purl.obolibrary.org/obo/GO_0002218 denotes innate immune response
T110 85-107 http://purl.obolibrary.org/obo/GO_0045088 denotes innate immune response
T109 85-107 http://purl.obolibrary.org/obo/GO_0002227 denotes innate immune response
T108 85-107 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune response
T106 58-73 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T97 206-216 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T114 92-107 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T113 85-107 http://purl.obolibrary.org/obo/GO_0045824 denotes innate immune response
T112 85-107 http://purl.obolibrary.org/obo/GO_0045089 denotes innate immune response

simple1

Id Subject Object Predicate Lexical cue
T174 10-15 Protein denotes TRAF6
T175 52-57 Protein denotes NFAT5
T176 133-138 Protein denotes NFAT5
T177 172-177 Protein denotes NFAT5

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T761 10-15 Protein denotes TRAF6
T762 52-57 Protein denotes NFAT5
T763 172-177 Protein denotes NFAT5
T764 133-138 Protein denotes NFAT5
T772 40-51 Positive_regulation denotes MTb-induced
T773 31-39 Negative_regulation denotes inhibits
T774 63-73 Gene_expression denotes expression
T775 125-132 Positive_regulation denotes induces
T776 156-166 Gene_expression denotes expression
R587 T762 T774 themeOf NFAT5,expression
R589 T764 T775 themeOf NFAT5,induces
R590 T764 T776 themeOf NFAT5,expression
R593 T774 T773 themeOf expression,inhibits
R594 T774 T772 themeOf expression,MTb-induced
R595 T776 T775 themeOf expression,induces

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T447 10-15 Protein denotes TRAF6
T448 52-57 Protein denotes NFAT5
T449 172-177 Protein denotes NFAT5
T450 133-138 Protein denotes NFAT5
T458 63-73 Gene_expression denotes expression
T459 31-39 Negative_regulation denotes inhibits
T460 40-51 Positive_regulation denotes MTb-induced
T461 156-166 Gene_expression denotes expression
T463 125-132 Positive_regulation denotes induces
R512 T448 T458 themeOf NFAT5,expression
R514 T450 T463 themeOf NFAT5,induces
R515 T450 T461 themeOf NFAT5,expression
R520 T458 T459 themeOf expression,inhibits
R521 T458 T460 themeOf expression,MTb-induced
R522 T461 T463 themeOf expression,induces

DLUT931

Id Subject Object Predicate Lexical cue
T440 125-132 Positive_regulation denotes induces
T438 156-166 Gene_expression denotes expression
T437 31-39 Negative_regulation denotes inhibits
T436 40-51 Positive_regulation denotes MTb-induced
T435 63-73 Gene_expression denotes expression
T427 10-15 Protein denotes TRAF6
T428 52-57 Protein denotes NFAT5
T429 172-177 Protein denotes NFAT5
T430 133-138 Protein denotes NFAT5
R241 T435 T436 themeOf expression,MTb-induced
R242 T436 T437 themeOf MTb-induced,inhibits
R243 T438 T440 themeOf expression,induces
R504 T428 T435 themeOf NFAT5,expression
R506 T430 T438 themeOf NFAT5,expression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T822 111-124 Regulation denotes MTb infection
T818 148-166 Gene_expression denotes protein expression
T817 40-73 Gene_expression denotes MTb-induced NFAT5 gene expression
T778 133-138 Protein denotes NFAT5
T779 111-114 Protein denotes MTb
T783 202-205 Protein denotes MTb
T784 133-143 Protein denotes NFAT5 gene
T793 148-155 Protein denotes protein
T794 52-57 Protein denotes NFAT5
T799 172-177 Protein denotes NFAT5
T801 40-51 Protein denotes MTb-induced
T802 10-15 Protein denotes TRAF6
R596 T779 T822 themeOf MTb,MTb infection
R601 T793 T818 themeOf protein,protein expression
R602 T794 T817 themeOf NFAT5,MTb-induced NFAT5 gene expression

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T727 238-241 IN denotes via
T726 226-237 NN denotes replication
T725 220-225 JJ denotes HIV-1
T724 217-219 IN denotes of
T723 206-216 NN denotes regulation
T722 202-205 NNP denotes MTb
T721 199-201 IN denotes in
T720 194-198 NN denotes role
T719 186-193 JJ denotes crucial
T718 184-185 DT denotes a
T717 178-183 VBZ denotes plays
T716 172-177 NNP denotes NFAT5
T715 168-171 CC denotes and
T714 166-167 , denotes ,
T713 156-166 NN denotes expression
T712 148-155 NN denotes protein
T711 144-147 CC denotes and
T710 139-143 NN denotes gene
T709 133-138 NNP denotes NFAT5
T708 125-132 VBZ denotes induces
T707 115-124 NN denotes infection
T706 111-114 NNP denotes MTb
T705 108-110 TO denotes to
T704 99-107 NN denotes response
T703 92-98 JJ denotes immune
T702 85-91 NN denotes innate
T701 81-84 DT denotes the
T700 79-80 , denotes ,
T699 75-79 RB denotes Thus
T698 73-74 . denotes .
T697 63-73 NN denotes expression
T696 58-62 NN denotes gene
T695 52-57 CD denotes NFAT5
T694 40-51 JJ denotes MTb-induced
T693 31-39 VBZ denotes inhibits
T692 17-30 RB denotes significantly
T691 15-16 , denotes ,
T690 10-15 NNP denotes TRAF6
T689 6-9 CC denotes and
T688 4-5 , denotes ,
R390 T691 T693 punct ",",inhibits
R391 T692 T693 advmod significantly,inhibits
R392 T693 T693 ROOT inhibits,inhibits
R393 T694 T697 amod MTb-induced,expression
R394 T695 T697 nummod NFAT5,expression
R395 T696 T697 compound gene,expression
R396 T697 T693 dobj expression,inhibits
R397 T698 T693 punct .,inhibits
R398 T699 T708 advmod Thus,induces
R399 T700 T708 punct ",",induces
R400 T701 T704 det the,response
R401 T702 T704 amod innate,response
R402 T703 T704 amod immune,response
R403 T704 T708 nsubj response,induces
R404 T705 T704 prep to,response
R405 T706 T707 compound MTb,infection
R406 T707 T705 pobj infection,to
R407 T708 T708 ROOT induces,induces
R408 T709 T710 compound NFAT5,gene
R409 T710 T708 dobj gene,induces
R410 T711 T710 cc and,gene
R411 T712 T713 compound protein,expression
R412 T713 T710 conj expression,gene
R413 T714 T708 punct ",",induces
R414 T715 T708 cc and,induces
R415 T716 T717 nsubj NFAT5,plays
R416 T717 T708 conj plays,induces
R417 T718 T720 det a,role
R418 T719 T720 amod crucial,role
R419 T720 T717 dobj role,plays
R420 T721 T720 prep in,role
R421 T722 T723 compound MTb,regulation
R422 T723 T721 pobj regulation,in
R423 T724 T723 prep of,regulation
R424 T725 T726 compound HIV-1,replication
R425 T726 T724 pobj replication,of
R426 T727 T717 prep via,plays

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T154 125-132 Positive_regulation denotes induces
T152 156-166 Gene_expression denotes expression
T151 202-205 Protein denotes MTb
T150 172-177 Protein denotes NFAT5
T149 133-143 Protein denotes NFAT5 gene
T148 31-39 Negative_regulation denotes inhibits
T147 31-39 Negative_regulation denotes inhibits
T146 31-39 Negative_regulation denotes inhibits
T145 40-51 Positive_regulation denotes MTb-induced
T144 63-73 Gene_expression denotes expression
T140 52-62 Protein denotes NFAT5 gene
T139 10-15 Protein denotes TRAF6
R26 T140 T144 themeOf NFAT5 gene,expression
R30 T144 T145 themeOf expression,MTb-induced
R31 T145 T146 themeOf MTb-induced,inhibits
R32 T145 T147 themeOf MTb-induced,inhibits
R33 T145 T148 themeOf MTb-induced,inhibits
R34 T149 T152 themeOf NFAT5 gene,expression
R37 T152 T154 themeOf expression,induces

testone

Id Subject Object Predicate Lexical cue
T30 156-166 Gene_expression denotes expression
T29 125-132 Positive_regulation denotes induces
T28 63-73 Gene_expression denotes expression
T27 44-51 Positive_regulation denotes induced
T26 31-39 Negative_regulation denotes inhibits
T21 172-177 Protein denotes NFAT5
T20 133-138 Protein denotes NFAT5
T19 52-57 Protein denotes NFAT5
T18 10-15 Protein denotes TRAF6
R3 T18 T26 causeOf TRAF6,inhibits
R4 T19 T28 themeOf NFAT5,expression
R5 T20 T30 themeOf NFAT5,expression
R7 T21 T29 themeOf NFAT5,induces
R8 T27 T26 themeOf induced,inhibits
R9 T28 T27 themeOf expression,induced
R10 T30 T29 themeOf expression,induces

test3

Id Subject Object Predicate Lexical cue
T41 172-177 Protein denotes NFAT5
T40 133-138 Protein denotes NFAT5
T39 52-57 Protein denotes NFAT5
T38 10-15 Protein denotes TRAF6
T54 172-177 Protein denotes NFAT5
T53 156-166 Gene_expression denotes expression
T52 133-138 Protein denotes NFAT5
T51 52-57 Protein denotes NFAT5
T50 10-15 Protein denotes TRAF6
R14 T52 T53 themeOf NFAT5,expression