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PMC:3320587 / 1106-1187 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T357 71-81 NN denotes expression
T356 66-70 NN denotes gene
T355 60-65 NN denotes NFAT5
T354 48-59 JJ denotes MTb-induced
T353 39-47 VB denotes inhibits
T352 25-38 RB denotes significantly
T351 23-24 -COMMA- denotes ,
T350 18-23 NN denotes TRAF6
T349 14-17 CC denotes and
T348 12-13 -COMMA- denotes ,
T347 7-12 NN denotes IRAK1
T346 5-6 -COMMA- denotes ,
T345 0-5 NN denotes MyD88
R173 T345 T346 arg1Of MyD88,","
R174 T346 T349 arg1Of ",",and
R175 T347 T346 arg2Of IRAK1,","
R178 T349 T348 arg1Of and,","
R179 T350 T349 arg2Of TRAF6,and
R182 T353 T351 arg1Of inhibits,","
R183 T353 T352 arg1Of inhibits,significantly
R184 T357 T353 arg2Of expression,inhibits
R185 T357 T354 arg1Of expression,MTb-induced
R186 T357 T355 arg1Of expression,NFAT5
R187 T357 T356 arg1Of expression,gene

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T89 0-5 Protein denotes MyD88
T90 7-12 Protein denotes IRAK1
T91 18-23 Protein denotes TRAF6
T92 60-65 Protein denotes NFAT5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T415 60-65 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T419 0-5 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T420 18-23 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6

GO-BP

Id Subject Object Predicate Lexical cue
T106 66-81 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression

simple1

Id Subject Object Predicate Lexical cue
T172 0-5 Protein denotes MyD88
T173 7-12 Protein denotes IRAK1
T174 18-23 Protein denotes TRAF6
T175 60-65 Protein denotes NFAT5

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T759 0-5 Protein denotes MyD88
T760 7-12 Protein denotes IRAK1
T761 18-23 Protein denotes TRAF6
T762 60-65 Protein denotes NFAT5
T772 48-59 Positive_regulation denotes MTb-induced
T773 39-47 Negative_regulation denotes inhibits
T774 71-81 Gene_expression denotes expression
R587 T762 T774 themeOf NFAT5,expression
R593 T774 T773 themeOf expression,inhibits
R594 T774 T772 themeOf expression,MTb-induced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T445 0-5 Protein denotes MyD88
T446 7-12 Protein denotes IRAK1
T447 18-23 Protein denotes TRAF6
T448 60-65 Protein denotes NFAT5
T458 71-81 Gene_expression denotes expression
T459 39-47 Negative_regulation denotes inhibits
T460 48-59 Positive_regulation denotes MTb-induced
R512 T448 T458 themeOf NFAT5,expression
R520 T458 T459 themeOf expression,inhibits
R521 T458 T460 themeOf expression,MTb-induced

DLUT931

Id Subject Object Predicate Lexical cue
T437 39-47 Negative_regulation denotes inhibits
T436 48-59 Positive_regulation denotes MTb-induced
T435 71-81 Gene_expression denotes expression
T425 0-5 Protein denotes MyD88
T426 7-12 Protein denotes IRAK1
T427 18-23 Protein denotes TRAF6
T428 60-65 Protein denotes NFAT5
R241 T435 T436 themeOf expression,MTb-induced
R242 T436 T437 themeOf MTb-induced,inhibits
R504 T428 T435 themeOf NFAT5,expression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T820 0-81 Negative_regulation denotes MyD88, IRAK1, and TRAF6, significantly inhibits MTb-induced NFAT5 gene expression
T817 48-81 Gene_expression denotes MTb-induced NFAT5 gene expression
T781 0-24 Protein denotes MyD88, IRAK1, and TRAF6,
T792 7-13 Protein denotes IRAK1,
T794 60-65 Protein denotes NFAT5
T801 48-59 Protein denotes MTb-induced
T802 18-23 Protein denotes TRAF6
R457 T817 T820 themeOf MTb-induced NFAT5 gene expression,"MyD88, IRAK1, and TRAF6, significantly inhibits MTb-induced NFAT5 gene expression"
R597 T781 T820 causeOf "MyD88, IRAK1, and TRAF6,","MyD88, IRAK1, and TRAF6, significantly inhibits MTb-induced NFAT5 gene expression"
R602 T794 T817 themeOf NFAT5,MTb-induced NFAT5 gene expression

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T697 71-81 NN denotes expression
T696 66-70 NN denotes gene
T695 60-65 CD denotes NFAT5
T694 48-59 JJ denotes MTb-induced
T693 39-47 VBZ denotes inhibits
T692 25-38 RB denotes significantly
T691 23-24 , denotes ,
T690 18-23 NNP denotes TRAF6
T689 14-17 CC denotes and
T688 12-13 , denotes ,
T687 7-12 NNP denotes IRAK1
T686 5-6 , denotes ,
T685 0-5 NNP denotes MyD88
R385 T686 T685 punct ",",MyD88
R386 T687 T685 conj IRAK1,MyD88
R387 T688 T687 punct ",",IRAK1
R388 T689 T687 cc and,IRAK1
R389 T690 T687 conj TRAF6,IRAK1
R390 T691 T693 punct ",",inhibits
R391 T692 T693 advmod significantly,inhibits
R392 T693 T693 ROOT inhibits,inhibits
R393 T694 T697 amod MTb-induced,expression
R394 T695 T697 nummod NFAT5,expression
R395 T696 T697 compound gene,expression
R396 T697 T693 dobj expression,inhibits

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T148 39-47 Negative_regulation denotes inhibits
T147 39-47 Negative_regulation denotes inhibits
T146 39-47 Negative_regulation denotes inhibits
T145 48-59 Positive_regulation denotes MTb-induced
T144 71-81 Gene_expression denotes expression
T140 60-70 Protein denotes NFAT5 gene
T139 18-23 Protein denotes TRAF6
T138 7-12 Protein denotes IRAK1
T137 0-5 Protein denotes MyD88
R26 T140 T144 themeOf NFAT5 gene,expression
R30 T144 T145 themeOf expression,MTb-induced
R31 T145 T146 themeOf MTb-induced,inhibits
R32 T145 T147 themeOf MTb-induced,inhibits
R33 T145 T148 themeOf MTb-induced,inhibits

testone

Id Subject Object Predicate Lexical cue
T28 71-81 Gene_expression denotes expression
T27 52-59 Positive_regulation denotes induced
T26 39-47 Negative_regulation denotes inhibits
T19 60-65 Protein denotes NFAT5
T18 18-23 Protein denotes TRAF6
T17 7-12 Protein denotes IRAK1
T16 0-5 Protein denotes MyD88
R3 T18 T26 causeOf TRAF6,inhibits
R4 T19 T28 themeOf NFAT5,expression
R8 T27 T26 themeOf induced,inhibits
R9 T28 T27 themeOf expression,induced
R2 T17 T26 causeOf IRAK1,inhibits

test3

Id Subject Object Predicate Lexical cue
T39 60-65 Protein denotes NFAT5
T38 18-23 Protein denotes TRAF6
T37 7-12 Protein denotes IRAK1
T36 0-5 Protein denotes MyD88
T51 60-65 Protein denotes NFAT5
T50 18-23 Protein denotes TRAF6
T49 7-12 Protein denotes IRAK1
T48 0-5 Protein denotes MyD88