PMC:3320587 / 1106-1187
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T357 | 71-81 | NN | denotes | expression |
T356 | 66-70 | NN | denotes | gene |
T355 | 60-65 | NN | denotes | NFAT5 |
T354 | 48-59 | JJ | denotes | MTb-induced |
T353 | 39-47 | VB | denotes | inhibits |
T352 | 25-38 | RB | denotes | significantly |
T351 | 23-24 | -COMMA- | denotes | , |
T350 | 18-23 | NN | denotes | TRAF6 |
T349 | 14-17 | CC | denotes | and |
T348 | 12-13 | -COMMA- | denotes | , |
T347 | 7-12 | NN | denotes | IRAK1 |
T346 | 5-6 | -COMMA- | denotes | , |
T345 | 0-5 | NN | denotes | MyD88 |
R173 | T345 | T346 | arg1Of | MyD88,"," |
R174 | T346 | T349 | arg1Of | ",",and |
R175 | T347 | T346 | arg2Of | IRAK1,"," |
R178 | T349 | T348 | arg1Of | and,"," |
R179 | T350 | T349 | arg2Of | TRAF6,and |
R182 | T353 | T351 | arg1Of | inhibits,"," |
R183 | T353 | T352 | arg1Of | inhibits,significantly |
R184 | T357 | T353 | arg2Of | expression,inhibits |
R185 | T357 | T354 | arg1Of | expression,MTb-induced |
R186 | T357 | T355 | arg1Of | expression,NFAT5 |
R187 | T357 | T356 | arg1Of | expression,gene |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T89 | 0-5 | Protein | denotes | MyD88 |
T90 | 7-12 | Protein | denotes | IRAK1 |
T91 | 18-23 | Protein | denotes | TRAF6 |
T92 | 60-65 | Protein | denotes | NFAT5 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T415 | 60-65 | http://www.uniprot.org/uniprot/O94916 | denotes | NFAT5 |
T419 | 0-5 | http://www.uniprot.org/uniprot/Q99836 | denotes | MyD88 |
T420 | 18-23 | http://www.uniprot.org/uniprot/Q9Y4K3 | denotes | TRAF6 |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T106 | 66-81 | http://purl.obolibrary.org/obo/GO_0010467 | denotes | gene expression |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T172 | 0-5 | Protein | denotes | MyD88 |
T173 | 7-12 | Protein | denotes | IRAK1 |
T174 | 18-23 | Protein | denotes | TRAF6 |
T175 | 60-65 | Protein | denotes | NFAT5 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T759 | 0-5 | Protein | denotes | MyD88 |
T760 | 7-12 | Protein | denotes | IRAK1 |
T761 | 18-23 | Protein | denotes | TRAF6 |
T762 | 60-65 | Protein | denotes | NFAT5 |
T772 | 48-59 | Positive_regulation | denotes | MTb-induced |
T773 | 39-47 | Negative_regulation | denotes | inhibits |
T774 | 71-81 | Gene_expression | denotes | expression |
R587 | T762 | T774 | themeOf | NFAT5,expression |
R593 | T774 | T773 | themeOf | expression,inhibits |
R594 | T774 | T772 | themeOf | expression,MTb-induced |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T445 | 0-5 | Protein | denotes | MyD88 |
T446 | 7-12 | Protein | denotes | IRAK1 |
T447 | 18-23 | Protein | denotes | TRAF6 |
T448 | 60-65 | Protein | denotes | NFAT5 |
T458 | 71-81 | Gene_expression | denotes | expression |
T459 | 39-47 | Negative_regulation | denotes | inhibits |
T460 | 48-59 | Positive_regulation | denotes | MTb-induced |
R512 | T448 | T458 | themeOf | NFAT5,expression |
R520 | T458 | T459 | themeOf | expression,inhibits |
R521 | T458 | T460 | themeOf | expression,MTb-induced |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T437 | 39-47 | Negative_regulation | denotes | inhibits |
T436 | 48-59 | Positive_regulation | denotes | MTb-induced |
T435 | 71-81 | Gene_expression | denotes | expression |
T425 | 0-5 | Protein | denotes | MyD88 |
T426 | 7-12 | Protein | denotes | IRAK1 |
T427 | 18-23 | Protein | denotes | TRAF6 |
T428 | 60-65 | Protein | denotes | NFAT5 |
R241 | T435 | T436 | themeOf | expression,MTb-induced |
R242 | T436 | T437 | themeOf | MTb-induced,inhibits |
R504 | T428 | T435 | themeOf | NFAT5,expression |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T820 | 0-81 | Negative_regulation | denotes | MyD88, IRAK1, and TRAF6, significantly inhibits MTb-induced NFAT5 gene expression |
T817 | 48-81 | Gene_expression | denotes | MTb-induced NFAT5 gene expression |
T781 | 0-24 | Protein | denotes | MyD88, IRAK1, and TRAF6, |
T792 | 7-13 | Protein | denotes | IRAK1, |
T794 | 60-65 | Protein | denotes | NFAT5 |
T801 | 48-59 | Protein | denotes | MTb-induced |
T802 | 18-23 | Protein | denotes | TRAF6 |
R457 | T817 | T820 | themeOf | MTb-induced NFAT5 gene expression,"MyD88, IRAK1, and TRAF6, significantly inhibits MTb-induced NFAT5 gene expression" |
R597 | T781 | T820 | causeOf | "MyD88, IRAK1, and TRAF6,","MyD88, IRAK1, and TRAF6, significantly inhibits MTb-induced NFAT5 gene expression" |
R602 | T794 | T817 | themeOf | NFAT5,MTb-induced NFAT5 gene expression |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T697 | 71-81 | NN | denotes | expression |
T696 | 66-70 | NN | denotes | gene |
T695 | 60-65 | CD | denotes | NFAT5 |
T694 | 48-59 | JJ | denotes | MTb-induced |
T693 | 39-47 | VBZ | denotes | inhibits |
T692 | 25-38 | RB | denotes | significantly |
T691 | 23-24 | , | denotes | , |
T690 | 18-23 | NNP | denotes | TRAF6 |
T689 | 14-17 | CC | denotes | and |
T688 | 12-13 | , | denotes | , |
T687 | 7-12 | NNP | denotes | IRAK1 |
T686 | 5-6 | , | denotes | , |
T685 | 0-5 | NNP | denotes | MyD88 |
R385 | T686 | T685 | punct | ",",MyD88 |
R386 | T687 | T685 | conj | IRAK1,MyD88 |
R387 | T688 | T687 | punct | ",",IRAK1 |
R388 | T689 | T687 | cc | and,IRAK1 |
R389 | T690 | T687 | conj | TRAF6,IRAK1 |
R390 | T691 | T693 | punct | ",",inhibits |
R391 | T692 | T693 | advmod | significantly,inhibits |
R392 | T693 | T693 | ROOT | inhibits,inhibits |
R393 | T694 | T697 | amod | MTb-induced,expression |
R394 | T695 | T697 | nummod | NFAT5,expression |
R395 | T696 | T697 | compound | gene,expression |
R396 | T697 | T693 | dobj | expression,inhibits |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T148 | 39-47 | Negative_regulation | denotes | inhibits |
T147 | 39-47 | Negative_regulation | denotes | inhibits |
T146 | 39-47 | Negative_regulation | denotes | inhibits |
T145 | 48-59 | Positive_regulation | denotes | MTb-induced |
T144 | 71-81 | Gene_expression | denotes | expression |
T140 | 60-70 | Protein | denotes | NFAT5 gene |
T139 | 18-23 | Protein | denotes | TRAF6 |
T138 | 7-12 | Protein | denotes | IRAK1 |
T137 | 0-5 | Protein | denotes | MyD88 |
R26 | T140 | T144 | themeOf | NFAT5 gene,expression |
R30 | T144 | T145 | themeOf | expression,MTb-induced |
R31 | T145 | T146 | themeOf | MTb-induced,inhibits |
R32 | T145 | T147 | themeOf | MTb-induced,inhibits |
R33 | T145 | T148 | themeOf | MTb-induced,inhibits |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T28 | 71-81 | Gene_expression | denotes | expression |
T27 | 52-59 | Positive_regulation | denotes | induced |
T26 | 39-47 | Negative_regulation | denotes | inhibits |
T19 | 60-65 | Protein | denotes | NFAT5 |
T18 | 18-23 | Protein | denotes | TRAF6 |
T17 | 7-12 | Protein | denotes | IRAK1 |
T16 | 0-5 | Protein | denotes | MyD88 |
R3 | T18 | T26 | causeOf | TRAF6,inhibits |
R4 | T19 | T28 | themeOf | NFAT5,expression |
R8 | T27 | T26 | themeOf | induced,inhibits |
R9 | T28 | T27 | themeOf | expression,induced |
R2 | T17 | T26 | causeOf | IRAK1,inhibits |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T39 | 60-65 | Protein | denotes | NFAT5 |
T38 | 18-23 | Protein | denotes | TRAF6 |
T37 | 7-12 | Protein | denotes | IRAK1 |
T36 | 0-5 | Protein | denotes | MyD88 |
T51 | 60-65 | Protein | denotes | NFAT5 |
T50 | 18-23 | Protein | denotes | TRAF6 |
T49 | 7-12 | Protein | denotes | IRAK1 |
T48 | 0-5 | Protein | denotes | MyD88 |