PMC:3320587 / 1106-1187
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T357 | 71-81 | NN | denotes | expression |
| T356 | 66-70 | NN | denotes | gene |
| T355 | 60-65 | NN | denotes | NFAT5 |
| T354 | 48-59 | JJ | denotes | MTb-induced |
| T353 | 39-47 | VB | denotes | inhibits |
| T352 | 25-38 | RB | denotes | significantly |
| T351 | 23-24 | -COMMA- | denotes | , |
| T350 | 18-23 | NN | denotes | TRAF6 |
| T349 | 14-17 | CC | denotes | and |
| T348 | 12-13 | -COMMA- | denotes | , |
| T347 | 7-12 | NN | denotes | IRAK1 |
| T346 | 5-6 | -COMMA- | denotes | , |
| T345 | 0-5 | NN | denotes | MyD88 |
| R173 | T345 | T346 | arg1Of | MyD88,"," |
| R174 | T346 | T349 | arg1Of | ",",and |
| R175 | T347 | T346 | arg2Of | IRAK1,"," |
| R178 | T349 | T348 | arg1Of | and,"," |
| R179 | T350 | T349 | arg2Of | TRAF6,and |
| R182 | T353 | T351 | arg1Of | inhibits,"," |
| R183 | T353 | T352 | arg1Of | inhibits,significantly |
| R184 | T357 | T353 | arg2Of | expression,inhibits |
| R185 | T357 | T354 | arg1Of | expression,MTb-induced |
| R186 | T357 | T355 | arg1Of | expression,NFAT5 |
| R187 | T357 | T356 | arg1Of | expression,gene |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T89 | 0-5 | Protein | denotes | MyD88 |
| T90 | 7-12 | Protein | denotes | IRAK1 |
| T91 | 18-23 | Protein | denotes | TRAF6 |
| T92 | 60-65 | Protein | denotes | NFAT5 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T415 | 60-65 | http://www.uniprot.org/uniprot/O94916 | denotes | NFAT5 |
| T419 | 0-5 | http://www.uniprot.org/uniprot/Q99836 | denotes | MyD88 |
| T420 | 18-23 | http://www.uniprot.org/uniprot/Q9Y4K3 | denotes | TRAF6 |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T106 | 66-81 | http://purl.obolibrary.org/obo/GO_0010467 | denotes | gene expression |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T172 | 0-5 | Protein | denotes | MyD88 |
| T173 | 7-12 | Protein | denotes | IRAK1 |
| T174 | 18-23 | Protein | denotes | TRAF6 |
| T175 | 60-65 | Protein | denotes | NFAT5 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T759 | 0-5 | Protein | denotes | MyD88 |
| T760 | 7-12 | Protein | denotes | IRAK1 |
| T761 | 18-23 | Protein | denotes | TRAF6 |
| T762 | 60-65 | Protein | denotes | NFAT5 |
| T772 | 48-59 | Positive_regulation | denotes | MTb-induced |
| T773 | 39-47 | Negative_regulation | denotes | inhibits |
| T774 | 71-81 | Gene_expression | denotes | expression |
| R587 | T762 | T774 | themeOf | NFAT5,expression |
| R593 | T774 | T773 | themeOf | expression,inhibits |
| R594 | T774 | T772 | themeOf | expression,MTb-induced |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T445 | 0-5 | Protein | denotes | MyD88 |
| T446 | 7-12 | Protein | denotes | IRAK1 |
| T447 | 18-23 | Protein | denotes | TRAF6 |
| T448 | 60-65 | Protein | denotes | NFAT5 |
| T458 | 71-81 | Gene_expression | denotes | expression |
| T459 | 39-47 | Negative_regulation | denotes | inhibits |
| T460 | 48-59 | Positive_regulation | denotes | MTb-induced |
| R512 | T448 | T458 | themeOf | NFAT5,expression |
| R520 | T458 | T459 | themeOf | expression,inhibits |
| R521 | T458 | T460 | themeOf | expression,MTb-induced |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T437 | 39-47 | Negative_regulation | denotes | inhibits |
| T436 | 48-59 | Positive_regulation | denotes | MTb-induced |
| T435 | 71-81 | Gene_expression | denotes | expression |
| T425 | 0-5 | Protein | denotes | MyD88 |
| T426 | 7-12 | Protein | denotes | IRAK1 |
| T427 | 18-23 | Protein | denotes | TRAF6 |
| T428 | 60-65 | Protein | denotes | NFAT5 |
| R241 | T435 | T436 | themeOf | expression,MTb-induced |
| R242 | T436 | T437 | themeOf | MTb-induced,inhibits |
| R504 | T428 | T435 | themeOf | NFAT5,expression |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T820 | 0-81 | Negative_regulation | denotes | MyD88, IRAK1, and TRAF6, significantly inhibits MTb-induced NFAT5 gene expression |
| T817 | 48-81 | Gene_expression | denotes | MTb-induced NFAT5 gene expression |
| T781 | 0-24 | Protein | denotes | MyD88, IRAK1, and TRAF6, |
| T792 | 7-13 | Protein | denotes | IRAK1, |
| T794 | 60-65 | Protein | denotes | NFAT5 |
| T801 | 48-59 | Protein | denotes | MTb-induced |
| T802 | 18-23 | Protein | denotes | TRAF6 |
| R457 | T817 | T820 | themeOf | MTb-induced NFAT5 gene expression,"MyD88, IRAK1, and TRAF6, significantly inhibits MTb-induced NFAT5 gene expression" |
| R597 | T781 | T820 | causeOf | "MyD88, IRAK1, and TRAF6,","MyD88, IRAK1, and TRAF6, significantly inhibits MTb-induced NFAT5 gene expression" |
| R602 | T794 | T817 | themeOf | NFAT5,MTb-induced NFAT5 gene expression |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T697 | 71-81 | NN | denotes | expression |
| T696 | 66-70 | NN | denotes | gene |
| T695 | 60-65 | CD | denotes | NFAT5 |
| T694 | 48-59 | JJ | denotes | MTb-induced |
| T693 | 39-47 | VBZ | denotes | inhibits |
| T692 | 25-38 | RB | denotes | significantly |
| T691 | 23-24 | , | denotes | , |
| T690 | 18-23 | NNP | denotes | TRAF6 |
| T689 | 14-17 | CC | denotes | and |
| T688 | 12-13 | , | denotes | , |
| T687 | 7-12 | NNP | denotes | IRAK1 |
| T686 | 5-6 | , | denotes | , |
| T685 | 0-5 | NNP | denotes | MyD88 |
| R385 | T686 | T685 | punct | ",",MyD88 |
| R386 | T687 | T685 | conj | IRAK1,MyD88 |
| R387 | T688 | T687 | punct | ",",IRAK1 |
| R388 | T689 | T687 | cc | and,IRAK1 |
| R389 | T690 | T687 | conj | TRAF6,IRAK1 |
| R390 | T691 | T693 | punct | ",",inhibits |
| R391 | T692 | T693 | advmod | significantly,inhibits |
| R392 | T693 | T693 | ROOT | inhibits,inhibits |
| R393 | T694 | T697 | amod | MTb-induced,expression |
| R394 | T695 | T697 | nummod | NFAT5,expression |
| R395 | T696 | T697 | compound | gene,expression |
| R396 | T697 | T693 | dobj | expression,inhibits |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T148 | 39-47 | Negative_regulation | denotes | inhibits |
| T147 | 39-47 | Negative_regulation | denotes | inhibits |
| T146 | 39-47 | Negative_regulation | denotes | inhibits |
| T145 | 48-59 | Positive_regulation | denotes | MTb-induced |
| T144 | 71-81 | Gene_expression | denotes | expression |
| T140 | 60-70 | Protein | denotes | NFAT5 gene |
| T139 | 18-23 | Protein | denotes | TRAF6 |
| T138 | 7-12 | Protein | denotes | IRAK1 |
| T137 | 0-5 | Protein | denotes | MyD88 |
| R26 | T140 | T144 | themeOf | NFAT5 gene,expression |
| R30 | T144 | T145 | themeOf | expression,MTb-induced |
| R31 | T145 | T146 | themeOf | MTb-induced,inhibits |
| R32 | T145 | T147 | themeOf | MTb-induced,inhibits |
| R33 | T145 | T148 | themeOf | MTb-induced,inhibits |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T28 | 71-81 | Gene_expression | denotes | expression |
| T27 | 52-59 | Positive_regulation | denotes | induced |
| T26 | 39-47 | Negative_regulation | denotes | inhibits |
| T19 | 60-65 | Protein | denotes | NFAT5 |
| T18 | 18-23 | Protein | denotes | TRAF6 |
| T17 | 7-12 | Protein | denotes | IRAK1 |
| T16 | 0-5 | Protein | denotes | MyD88 |
| R3 | T18 | T26 | causeOf | TRAF6,inhibits |
| R4 | T19 | T28 | themeOf | NFAT5,expression |
| R8 | T27 | T26 | themeOf | induced,inhibits |
| R9 | T28 | T27 | themeOf | expression,induced |
| R2 | T17 | T26 | causeOf | IRAK1,inhibits |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T39 | 60-65 | Protein | denotes | NFAT5 |
| T38 | 18-23 | Protein | denotes | TRAF6 |
| T37 | 7-12 | Protein | denotes | IRAK1 |
| T36 | 0-5 | Protein | denotes | MyD88 |
| T51 | 60-65 | Protein | denotes | NFAT5 |
| T50 | 18-23 | Protein | denotes | TRAF6 |
| T49 | 7-12 | Protein | denotes | IRAK1 |
| T48 | 0-5 | Protein | denotes | MyD88 |