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PMC:3320587 / 1036-1179 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T356 136-140 NN denotes gene
T355 130-135 NN denotes NFAT5
T354 118-129 JJ denotes MTb-induced
T353 109-117 VB denotes inhibits
T352 95-108 RB denotes significantly
T351 93-94 -COMMA- denotes ,
T350 88-93 NN denotes TRAF6
T349 84-87 CC denotes and
T348 82-83 -COMMA- denotes ,
T347 77-82 NN denotes IRAK1
T346 75-76 -COMMA- denotes ,
T345 70-75 NN denotes MyD88
T344 60-69 NN denotes molecules
T343 50-59 VB denotes signaling
T342 39-49 JJ denotes downstream
T341 35-38 DT denotes the
T340 25-34 VB denotes including
T339 23-24 -COMMA- denotes ,
T338 14-23 NN denotes monocytes
T337 8-13 JJ denotes human
T336 5-7 IN denotes in
R166 T338 T336 arg2Of monocytes,in
R167 T338 T337 arg1Of monocytes,human
R168 T338 T339 arg1Of monocytes,","
R169 T338 T340 arg1Of monocytes,including
R170 T344 T341 arg1Of molecules,the
R171 T344 T342 arg1Of molecules,downstream
R172 T344 T343 arg1Of molecules,signaling
R173 T345 T346 arg1Of MyD88,","
R174 T346 T349 arg1Of ",",and
R175 T347 T346 arg2Of IRAK1,","
R176 T349 T340 arg2Of and,including
R177 T349 T344 arg1Of and,molecules
R178 T349 T348 arg1Of and,","
R179 T350 T349 arg2Of TRAF6,and
R182 T353 T351 arg1Of inhibits,","
R183 T353 T352 arg1Of inhibits,significantly

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T89 70-75 Protein denotes MyD88
T90 77-82 Protein denotes IRAK1
T91 88-93 Protein denotes TRAF6
T92 130-135 Protein denotes NFAT5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T415 130-135 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T419 70-75 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T420 88-93 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6

GO-BP

Id Subject Object Predicate Lexical cue
T101 50-59 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

simple1

Id Subject Object Predicate Lexical cue
T172 70-75 Protein denotes MyD88
T173 77-82 Protein denotes IRAK1
T174 88-93 Protein denotes TRAF6
T175 130-135 Protein denotes NFAT5

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T759 70-75 Protein denotes MyD88
T760 77-82 Protein denotes IRAK1
T761 88-93 Protein denotes TRAF6
T762 130-135 Protein denotes NFAT5
T772 118-129 Positive_regulation denotes MTb-induced
T773 109-117 Negative_regulation denotes inhibits

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T445 70-75 Protein denotes MyD88
T446 77-82 Protein denotes IRAK1
T447 88-93 Protein denotes TRAF6
T448 130-135 Protein denotes NFAT5
T459 109-117 Negative_regulation denotes inhibits
T460 118-129 Positive_regulation denotes MTb-induced

DLUT931

Id Subject Object Predicate Lexical cue
T437 109-117 Negative_regulation denotes inhibits
T436 118-129 Positive_regulation denotes MTb-induced
T425 70-75 Protein denotes MyD88
T426 77-82 Protein denotes IRAK1
T427 88-93 Protein denotes TRAF6
T428 130-135 Protein denotes NFAT5
R242 T436 T437 themeOf MTb-induced,inhibits

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T808 60-69 Entity denotes molecules
T781 70-94 Protein denotes MyD88, IRAK1, and TRAF6,
T791 8-24 Entity denotes human monocytes,
T792 77-83 Protein denotes IRAK1,
T794 130-135 Protein denotes NFAT5
T801 118-129 Protein denotes MTb-induced
T802 88-93 Protein denotes TRAF6

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T696 136-140 NN denotes gene
T695 130-135 CD denotes NFAT5
T694 118-129 JJ denotes MTb-induced
T693 109-117 VBZ denotes inhibits
T692 95-108 RB denotes significantly
T691 93-94 , denotes ,
T690 88-93 NNP denotes TRAF6
T689 84-87 CC denotes and
T688 82-83 , denotes ,
T687 77-82 NNP denotes IRAK1
T686 75-76 , denotes ,
T685 70-75 NNP denotes MyD88
T684 60-69 NNS denotes molecules
T683 50-59 VBG denotes signaling
T676 5-7 IN denotes in
T677 8-13 JJ denotes human
T678 14-23 NNS denotes monocytes
T679 23-24 , denotes ,
T680 25-34 VBG denotes including
T681 35-38 DT denotes the
T682 39-49 JJ denotes downstream
R382 T683 T684 amod signaling,molecules
R383 T684 T680 pobj molecules,including
R384 T685 T680 pobj MyD88,including
R385 T686 T685 punct ",",MyD88
R386 T687 T685 conj IRAK1,MyD88
R387 T688 T687 punct ",",IRAK1
R388 T689 T687 cc and,IRAK1
R389 T690 T687 conj TRAF6,IRAK1
R390 T691 T693 punct ",",inhibits
R391 T692 T693 advmod significantly,inhibits
R392 T693 T693 ROOT inhibits,inhibits
R575 T677 T678 amod human,monocytes
R576 T678 T676 pobj monocytes,in
R577 T679 T678 punct ",",monocytes
R578 T680 T678 prep including,monocytes
R579 T681 T684 det the,molecules
R580 T682 T684 amod downstream,molecules

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T148 109-117 Negative_regulation denotes inhibits
T147 109-117 Negative_regulation denotes inhibits
T146 109-117 Negative_regulation denotes inhibits
T145 118-129 Positive_regulation denotes MTb-induced
T140 130-140 Protein denotes NFAT5 gene
T139 88-93 Protein denotes TRAF6
T138 77-82 Protein denotes IRAK1
T137 70-75 Protein denotes MyD88
R31 T145 T146 themeOf MTb-induced,inhibits
R32 T145 T147 themeOf MTb-induced,inhibits
R33 T145 T148 themeOf MTb-induced,inhibits

testone

Id Subject Object Predicate Lexical cue
T27 122-129 Positive_regulation denotes induced
T26 109-117 Negative_regulation denotes inhibits
T19 130-135 Protein denotes NFAT5
T18 88-93 Protein denotes TRAF6
T17 77-82 Protein denotes IRAK1
T16 70-75 Protein denotes MyD88
R3 T18 T26 causeOf TRAF6,inhibits
R8 T27 T26 themeOf induced,inhibits
R2 T17 T26 causeOf IRAK1,inhibits

test3

Id Subject Object Predicate Lexical cue
T39 130-135 Protein denotes NFAT5
T38 88-93 Protein denotes TRAF6
T37 77-82 Protein denotes IRAK1
T36 70-75 Protein denotes MyD88
T51 130-135 Protein denotes NFAT5
T50 88-93 Protein denotes TRAF6
T49 77-82 Protein denotes IRAK1
T48 70-75 Protein denotes MyD88