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PMC:3320587 / 1023-1130 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T351 106-107 -COMMA- denotes ,
T350 101-106 NN denotes TRAF6
T349 97-100 CC denotes and
T348 95-96 -COMMA- denotes ,
T347 90-95 NN denotes IRAK1
T346 88-89 -COMMA- denotes ,
T345 83-88 NN denotes MyD88
T344 73-82 NN denotes molecules
T343 63-72 VB denotes signaling
T342 52-62 JJ denotes downstream
T341 48-51 DT denotes the
T340 38-47 VB denotes including
T339 36-37 -COMMA- denotes ,
T338 27-36 NN denotes monocytes
T337 21-26 JJ denotes human
T336 18-20 IN denotes in
T335 10-17 NN denotes pathway
T334 6-9 NN denotes TLR
T333 2-5 DT denotes the
R163 T335 T333 arg1Of pathway,the
R164 T335 T334 arg1Of pathway,TLR
R165 T335 T336 arg1Of pathway,in
R166 T338 T336 arg2Of monocytes,in
R167 T338 T337 arg1Of monocytes,human
R168 T338 T339 arg1Of monocytes,","
R169 T338 T340 arg1Of monocytes,including
R170 T344 T341 arg1Of molecules,the
R171 T344 T342 arg1Of molecules,downstream
R172 T344 T343 arg1Of molecules,signaling
R173 T345 T346 arg1Of MyD88,","
R174 T346 T349 arg1Of ",",and
R175 T347 T346 arg2Of IRAK1,","
R176 T349 T340 arg2Of and,including
R177 T349 T344 arg1Of and,molecules
R178 T349 T348 arg1Of and,","
R179 T350 T349 arg2Of TRAF6,and

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T89 83-88 Protein denotes MyD88
T90 90-95 Protein denotes IRAK1
T91 101-106 Protein denotes TRAF6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T419 83-88 http://www.uniprot.org/uniprot/Q99836 denotes MyD88
T420 101-106 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6

GO-BP

Id Subject Object Predicate Lexical cue
T101 63-72 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

simple1

Id Subject Object Predicate Lexical cue
T172 83-88 Protein denotes MyD88
T173 90-95 Protein denotes IRAK1
T174 101-106 Protein denotes TRAF6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T759 83-88 Protein denotes MyD88
T760 90-95 Protein denotes IRAK1
T761 101-106 Protein denotes TRAF6

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T445 83-88 Protein denotes MyD88
T446 90-95 Protein denotes IRAK1
T447 101-106 Protein denotes TRAF6

DLUT931

Id Subject Object Predicate Lexical cue
T425 83-88 Protein denotes MyD88
T426 90-95 Protein denotes IRAK1
T427 101-106 Protein denotes TRAF6

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T808 73-82 Entity denotes molecules
T781 83-107 Protein denotes MyD88, IRAK1, and TRAF6,
T791 21-37 Entity denotes human monocytes,
T792 90-96 Protein denotes IRAK1,
T802 101-106 Protein denotes TRAF6

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T691 106-107 , denotes ,
T690 101-106 NNP denotes TRAF6
T689 97-100 CC denotes and
T688 95-96 , denotes ,
T687 90-95 NNP denotes IRAK1
T686 88-89 , denotes ,
T685 83-88 NNP denotes MyD88
T684 73-82 NNS denotes molecules
T683 63-72 VBG denotes signaling
T673 2-5 DT denotes the
T674 6-9 NNP denotes TLR
T675 10-17 NN denotes pathway
T676 18-20 IN denotes in
T677 21-26 JJ denotes human
T678 27-36 NNS denotes monocytes
T679 36-37 , denotes ,
T680 38-47 VBG denotes including
T681 48-51 DT denotes the
T682 52-62 JJ denotes downstream
R382 T683 T684 amod signaling,molecules
R383 T684 T680 pobj molecules,including
R384 T685 T680 pobj MyD88,including
R385 T686 T685 punct ",",MyD88
R386 T687 T685 conj IRAK1,MyD88
R387 T688 T687 punct ",",IRAK1
R388 T689 T687 cc and,IRAK1
R389 T690 T687 conj TRAF6,IRAK1
R571 T673 T675 det the,pathway
R572 T674 T675 compound TLR,pathway
R574 T676 T675 prep in,pathway
R575 T677 T678 amod human,monocytes
R576 T678 T676 pobj monocytes,in
R577 T679 T678 punct ",",monocytes
R578 T680 T678 prep including,monocytes
R579 T681 T684 det the,molecules
R580 T682 T684 amod downstream,molecules

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T139 101-106 Protein denotes TRAF6
T138 90-95 Protein denotes IRAK1
T137 83-88 Protein denotes MyD88
T136 6-9 Protein denotes TLR

testone

Id Subject Object Predicate Lexical cue
T18 101-106 Protein denotes TRAF6
T17 90-95 Protein denotes IRAK1
T16 83-88 Protein denotes MyD88

test3

Id Subject Object Predicate Lexical cue
T38 101-106 Protein denotes TRAF6
T37 90-95 Protein denotes IRAK1
T36 83-88 Protein denotes MyD88
T50 101-106 Protein denotes TRAF6
T49 90-95 Protein denotes IRAK1
T48 83-88 Protein denotes MyD88