PMC:3317373 / 865-1075
Annnotations
pmc-enju-pas
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bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T47","span":{"begin":137,"end":141},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"NF-κB and expression of proinflammatory cytokines mentioned above were upregulated at 24 h after scratch. The expression and activity of MMP9 were also elevated. And such tendency was much more prominent in Nrf"}
sentences
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simple1
{"project":"simple1","denotations":[{"id":"T264","span":{"begin":137,"end":141},"obj":"Protein"}],"text":"NF-κB and expression of proinflammatory cytokines mentioned above were upregulated at 24 h after scratch. The expression and activity of MMP9 were also elevated. And such tendency was much more prominent in Nrf"}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T559","span":{"begin":137,"end":141},"obj":"Protein"},{"id":"T560","span":{"begin":152,"end":160},"obj":"Positive_regulation"},{"id":"T561","span":{"begin":110,"end":120},"obj":"Gene_expression"}],"relations":[{"id":"R446","pred":"themeOf","subj":"T559","obj":"T561"},{"id":"R447","pred":"themeOf","subj":"T561","obj":"T560"}],"text":"NF-κB and expression of proinflammatory cytokines mentioned above were upregulated at 24 h after scratch. The expression and activity of MMP9 were also elevated. And such tendency was much more prominent in Nrf"}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T281","span":{"begin":110,"end":120},"obj":"Gene_expression"},{"id":"T272","span":{"begin":137,"end":141},"obj":"Protein"},{"id":"T273","span":{"begin":152,"end":160},"obj":"Positive_regulation"}],"relations":[{"id":"R206","pred":"themeOf","subj":"T281","obj":"T273"},{"id":"R443","pred":"themeOf","subj":"T272","obj":"T281"}],"text":"NF-κB and expression of proinflammatory cytokines mentioned above were upregulated at 24 h after scratch. The expression and activity of MMP9 were also elevated. And such tendency was much more prominent in Nrf"}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T278","span":{"begin":137,"end":141},"obj":"Protein"},{"id":"T279","span":{"begin":110,"end":120},"obj":"Gene_expression"},{"id":"T280","span":{"begin":152,"end":160},"obj":"Positive_regulation"}],"relations":[{"id":"R444","pred":"themeOf","subj":"T278","obj":"T279"},{"id":"R445","pred":"themeOf","subj":"T279","obj":"T280"}],"text":"NF-κB and expression of proinflammatory cytokines mentioned above were upregulated at 24 h after scratch. The expression and activity of MMP9 were also elevated. And such tendency was much more prominent in Nrf"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T592","span":{"begin":10,"end":59},"obj":"Gene_expression"},{"id":"T589","span":{"begin":134,"end":141},"obj":"Protein"},{"id":"T562","span":{"begin":89,"end":104},"obj":"Entity"},{"id":"T568","span":{"begin":0,"end":5},"obj":"Protein"},{"id":"T583","span":{"begin":21,"end":49},"obj":"Protein"}],"relations":[{"id":"R450","pred":"themeOf","subj":"T583","obj":"T592"}],"text":"NF-κB and expression of proinflammatory cytokines mentioned above were upregulated at 24 h after scratch. The expression and activity of MMP9 were also elevated. And such tendency was much more prominent in Nrf"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T493","span":{"begin":204,"end":206},"obj":"IN"},{"id":"T492","span":{"begin":194,"end":203},"obj":"JJ"},{"id":"T491","span":{"begin":189,"end":193},"obj":"JJR"},{"id":"T490","span":{"begin":184,"end":188},"obj":"RB"},{"id":"T489","span":{"begin":180,"end":183},"obj":"VBD"},{"id":"T488","span":{"begin":171,"end":179},"obj":"NN"},{"id":"T487","span":{"begin":166,"end":170},"obj":"JJ"},{"id":"T486","span":{"begin":162,"end":165},"obj":"CC"},{"id":"T485","span":{"begin":160,"end":161},"obj":"."},{"id":"T484","span":{"begin":152,"end":160},"obj":"VBN"},{"id":"T483","span":{"begin":147,"end":151},"obj":"RB"},{"id":"T482","span":{"begin":142,"end":146},"obj":"VBD"},{"id":"T481","span":{"begin":137,"end":141},"obj":"CD"},{"id":"T480","span":{"begin":134,"end":136},"obj":"IN"},{"id":"T479","span":{"begin":125,"end":133},"obj":"NN"},{"id":"T478","span":{"begin":121,"end":124},"obj":"CC"},{"id":"T477","span":{"begin":110,"end":120},"obj":"NN"},{"id":"T476","span":{"begin":106,"end":109},"obj":"DT"},{"id":"T475","span":{"begin":104,"end":105},"obj":"."},{"id":"T474","span":{"begin":97,"end":104},"obj":"NN"},{"id":"T473","span":{"begin":91,"end":96},"obj":"IN"},{"id":"T472","span":{"begin":89,"end":90},"obj":"NN"},{"id":"T471","span":{"begin":86,"end":88},"obj":"CD"},{"id":"T470","span":{"begin":83,"end":85},"obj":"IN"},{"id":"T469","span":{"begin":71,"end":82},"obj":"VBN"},{"id":"T468","span":{"begin":66,"end":70},"obj":"VBD"},{"id":"T467","span":{"begin":60,"end":65},"obj":"IN"},{"id":"T466","span":{"begin":50,"end":59},"obj":"VBN"},{"id":"T465","span":{"begin":40,"end":49},"obj":"NNS"},{"id":"T464","span":{"begin":24,"end":39},"obj":"JJ"},{"id":"T463","span":{"begin":21,"end":23},"obj":"IN"},{"id":"T462","span":{"begin":10,"end":20},"obj":"NN"},{"id":"T461","span":{"begin":6,"end":9},"obj":"CC"},{"id":"T460","span":{"begin":0,"end":5},"obj":"NNP"}],"relations":[{"id":"R365","pred":"prep","subj":"T463","obj":"T462"},{"id":"R366","pred":"amod","subj":"T464","obj":"T465"},{"id":"R367","pred":"pobj","subj":"T465","obj":"T463"},{"id":"R368","pred":"acl","subj":"T466","obj":"T465"},{"id":"R369","pred":"advmod","subj":"T467","obj":"T466"},{"id":"R370","pred":"auxpass","subj":"T468","obj":"T469"},{"id":"R371","pred":"ROOT","subj":"T469","obj":"T469"},{"id":"R372","pred":"prep","subj":"T470","obj":"T469"},{"id":"R373","pred":"nummod","subj":"T471","obj":"T472"},{"id":"R374","pred":"pobj","subj":"T472","obj":"T470"},{"id":"R375","pred":"prep","subj":"T473","obj":"T469"},{"id":"R376","pred":"pobj","subj":"T474","obj":"T473"},{"id":"R377","pred":"punct","subj":"T475","obj":"T469"},{"id":"R378","pred":"det","subj":"T476","obj":"T477"},{"id":"R379","pred":"nsubjpass","subj":"T477","obj":"T484"},{"id":"R380","pred":"cc","subj":"T478","obj":"T477"},{"id":"R381","pred":"conj","subj":"T479","obj":"T477"},{"id":"R382","pred":"prep","subj":"T480","obj":"T477"},{"id":"R383","pred":"pobj","subj":"T481","obj":"T480"},{"id":"R384","pred":"auxpass","subj":"T482","obj":"T484"},{"id":"R385","pred":"advmod","subj":"T483","obj":"T484"},{"id":"R386","pred":"ROOT","subj":"T484","obj":"T484"},{"id":"R387","pred":"punct","subj":"T485","obj":"T484"},{"id":"R388","pred":"cc","subj":"T486","obj":"T489"},{"id":"R389","pred":"amod","subj":"T487","obj":"T488"},{"id":"R390","pred":"nsubj","subj":"T488","obj":"T489"},{"id":"R391","pred":"ROOT","subj":"T489","obj":"T489"},{"id":"R392","pred":"advmod","subj":"T490","obj":"T491"},{"id":"R393","pred":"advmod","subj":"T491","obj":"T492"},{"id":"R394","pred":"acomp","subj":"T492","obj":"T489"},{"id":"R395","pred":"prep","subj":"T493","obj":"T492"}],"text":"NF-κB and expression of proinflammatory cytokines mentioned above were upregulated at 24 h after scratch. The expression and activity of MMP9 were also elevated. And such tendency was much more prominent in Nrf"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T309","span":{"begin":152,"end":160},"obj":"Positive_regulation"},{"id":"T308","span":{"begin":110,"end":120},"obj":"Gene_expression"},{"id":"T307","span":{"begin":137,"end":141},"obj":"Protein"},{"id":"T306","span":{"begin":71,"end":82},"obj":"Positive_regulation"},{"id":"T305","span":{"begin":0,"end":5},"obj":"Protein"}],"relations":[{"id":"R212","pred":"themeOf","subj":"T305","obj":"T306"},{"id":"R213","pred":"themeOf","subj":"T307","obj":"T308"},{"id":"R214","pred":"themeOf","subj":"T308","obj":"T309"}],"text":"NF-κB and expression of proinflammatory cytokines mentioned above were upregulated at 24 h after scratch. The expression and activity of MMP9 were also elevated. And such tendency was much more prominent in Nrf"}
testone
{"project":"testone","denotations":[{"id":"T10","span":{"begin":137,"end":141},"obj":"Protein"}],"text":"NF-κB and expression of proinflammatory cytokines mentioned above were upregulated at 24 h after scratch. The expression and activity of MMP9 were also elevated. And such tendency was much more prominent in Nrf"}
test3
{"project":"test3","denotations":[{"id":"T21","span":{"begin":137,"end":141},"obj":"Protein"},{"id":"T16","span":{"begin":137,"end":141},"obj":"Protein"}],"text":"NF-κB and expression of proinflammatory cytokines mentioned above were upregulated at 24 h after scratch. The expression and activity of MMP9 were also elevated. And such tendency was much more prominent in Nrf"}