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PMC:3317373 / 821-973 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T206 141-148 NN denotes scratch
T205 135-140 IN denotes after
T204 133-134 NN denotes h
T203 130-132 CD denotes 24
T202 127-129 IN denotes at
T201 115-126 VB denotes upregulated
T200 110-114 VB denotes were
T199 104-109 IN denotes above
T198 94-103 VB denotes mentioned
T197 84-93 NN denotes cytokines
T196 68-83 JJ denotes proinflammatory
T195 65-67 IN denotes of
T194 54-64 NN denotes expression
T193 50-53 CC denotes and
T192 44-49 NN denotes NF-κB
T191 41-43 IN denotes of
T190 32-40 NN denotes activity
T189 28-31 DT denotes The
T188 22-26 NN denotes MMP9
T187 19-21 IN denotes of
T186 10-18 NN denotes activity
T185 6-9 DT denotes the
R137 T186 T185 arg1Of activity,the
R138 T186 T187 arg1Of activity,of
R139 T188 T187 arg2Of MMP9,of
R140 T190 T189 arg1Of activity,The
R141 T190 T191 arg1Of activity,of
R142 T190 T200 arg1Of activity,were
R143 T190 T201 arg2Of activity,upregulated
R144 T192 T193 arg1Of NF-κB,and
R145 T193 T191 arg2Of and,of
R146 T193 T195 arg1Of and,of
R147 T194 T193 arg2Of expression,and
R148 T197 T195 arg2Of cytokines,of
R149 T197 T196 arg1Of cytokines,proinflammatory
R150 T197 T198 arg2Of cytokines,mentioned
R151 T198 T199 arg1Of mentioned,above
R152 T201 T200 arg2Of upregulated,were
R153 T201 T202 arg1Of upregulated,at
R154 T204 T202 arg2Of h,at
R155 T204 T203 arg1Of h,24
R156 T204 T205 arg1Of h,after
R157 T206 T205 arg2Of scratch,after

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T46 22-26 Protein denotes MMP9

sentences

Id Subject Object Predicate Lexical cue
T31 28-149 Sentence denotes The activity of NF-κB and expression of proinflammatory cytokines mentioned above were upregulated at 24 h after scratch.
T9 28-149 Sentence denotes The activity of NF-κB and expression of proinflammatory cytokines mentioned above were upregulated at 24 h after scratch.

simple1

Id Subject Object Predicate Lexical cue
T263 22-26 Protein denotes MMP9

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T558 22-26 Protein denotes MMP9

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T271 22-26 Protein denotes MMP9

DLUT931

Id Subject Object Predicate Lexical cue
T277 22-26 Protein denotes MMP9

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T592 54-103 Gene_expression denotes expression of proinflammatory cytokines mentioned
T562 133-148 Entity denotes h after scratch
T563 19-26 Protein denotes of MMP9
T568 44-49 Protein denotes NF-κB
T583 65-93 Protein denotes of proinflammatory cytokines
R450 T583 T592 themeOf of proinflammatory cytokines,expression of proinflammatory cytokines mentioned

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T475 148-149 . denotes .
T474 141-148 NN denotes scratch
T473 135-140 IN denotes after
T472 133-134 NN denotes h
T471 130-132 CD denotes 24
T470 127-129 IN denotes at
T469 115-126 VBN denotes upregulated
T468 110-114 VBD denotes were
T467 104-109 IN denotes above
T466 94-103 VBN denotes mentioned
T465 84-93 NNS denotes cytokines
T464 68-83 JJ denotes proinflammatory
T463 65-67 IN denotes of
T462 54-64 NN denotes expression
T461 50-53 CC denotes and
T460 44-49 NNP denotes NF-κB
T459 41-43 IN denotes of
T458 32-40 NN denotes activity
T457 28-31 DT denotes The
T456 26-27 . denotes .
T455 22-26 NNP denotes MMP9
T454 19-21 IN denotes of
T453 10-18 NN denotes activity
T452 6-9 DT denotes the
R354 T452 T453 det the,activity
R356 T454 T453 prep of,activity
R357 T455 T454 pobj MMP9,of
R359 T457 T458 det The,activity
R360 T458 T469 nsubjpass activity,upregulated
R361 T459 T458 prep of,activity
R362 T460 T459 pobj NF-κB,of
R363 T461 T458 cc and,activity
R364 T462 T458 conj expression,activity
R365 T463 T462 prep of,expression
R366 T464 T465 amod proinflammatory,cytokines
R367 T465 T463 pobj cytokines,of
R368 T466 T465 acl mentioned,cytokines
R369 T467 T466 advmod above,mentioned
R370 T468 T469 auxpass were,upregulated
R371 T469 T469 ROOT upregulated,upregulated
R372 T470 T469 prep at,upregulated
R373 T471 T472 nummod 24,h
R374 T472 T470 pobj h,at
R375 T473 T469 prep after,upregulated
R376 T474 T473 pobj scratch,after
R377 T475 T469 punct .,upregulated

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T306 115-126 Positive_regulation denotes upregulated
T305 44-49 Protein denotes NF-κB
T304 22-26 Protein denotes MMP9
R212 T305 T306 themeOf NF-κB,upregulated

testone

Id Subject Object Predicate Lexical cue
T9 22-26 Protein denotes MMP9

test3

Id Subject Object Predicate Lexical cue
T20 22-26 Protein denotes MMP9
T15 22-26 Protein denotes MMP9