PMC:3317373 / 733-921
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T183 | 84-86 | TO | denotes | to |
T182 | 74-83 | VB | denotes | performed |
T181 | 70-73 | VB | denotes | was |
T180 | 59-69 | NN | denotes | zymography |
T179 | 51-58 | NN | denotes | Gelatin |
T178 | 40-49 | VB | denotes | evaluated |
T177 | 35-39 | RB | denotes | also |
T176 | 30-34 | VB | denotes | were |
T175 | 25-29 | NN | denotes | MMP9 |
T174 | 21-24 | CC | denotes | and |
T173 | 19-20 | -COMMA- | denotes | , |
T172 | 15-19 | NN | denotes | IL-6 |
T171 | 13-14 | -COMMA- | denotes | , |
T170 | 8-13 | NN | denotes | IL-1β |
T169 | 6-7 | -COMMA- | denotes | , |
T168 | 1-6 | NN | denotes | TNF-α |
T197 | 172-181 | NN | denotes | cytokines |
T196 | 156-171 | JJ | denotes | proinflammatory |
T195 | 153-155 | IN | denotes | of |
T194 | 142-152 | NN | denotes | expression |
T193 | 138-141 | CC | denotes | and |
T192 | 132-137 | NN | denotes | NF-κB |
T191 | 129-131 | IN | denotes | of |
T190 | 120-128 | NN | denotes | activity |
T189 | 116-119 | DT | denotes | The |
T188 | 110-114 | NN | denotes | MMP9 |
T187 | 107-109 | IN | denotes | of |
T186 | 98-106 | NN | denotes | activity |
T185 | 94-97 | DT | denotes | the |
T184 | 87-93 | VB | denotes | detect |
R120 | T168 | T169 | arg1Of | TNF-α,"," |
R121 | T169 | T171 | arg1Of | ",","," |
R122 | T170 | T169 | arg2Of | IL-1β,"," |
R123 | T171 | T174 | arg1Of | ",",and |
R124 | T172 | T171 | arg2Of | IL-6,"," |
R126 | T174 | T173 | arg1Of | and,"," |
R127 | T175 | T174 | arg2Of | MMP9,and |
R128 | T178 | T176 | arg2Of | evaluated,were |
R129 | T178 | T177 | arg1Of | evaluated,also |
R130 | T180 | T179 | arg1Of | zymography,Gelatin |
R131 | T180 | T181 | arg1Of | zymography,was |
R132 | T180 | T182 | arg2Of | zymography,performed |
R133 | T182 | T181 | arg2Of | performed,was |
R134 | T184 | T182 | arg3Of | detect,performed |
R135 | T184 | T183 | arg1Of | detect,to |
R136 | T186 | T184 | arg2Of | activity,detect |
R137 | T186 | T185 | arg1Of | activity,the |
R138 | T186 | T187 | arg1Of | activity,of |
R139 | T188 | T187 | arg2Of | MMP9,of |
R140 | T190 | T189 | arg1Of | activity,The |
R141 | T190 | T191 | arg1Of | activity,of |
R144 | T192 | T193 | arg1Of | NF-κB,and |
R145 | T193 | T191 | arg2Of | and,of |
R146 | T193 | T195 | arg1Of | and,of |
R147 | T194 | T193 | arg2Of | expression,and |
R148 | T197 | T195 | arg2Of | cytokines,of |
R149 | T197 | T196 | arg1Of | cytokines,proinflammatory |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T43 | 8-13 | Protein | denotes | IL-1β |
T44 | 15-19 | Protein | denotes | IL-6 |
T45 | 25-29 | Protein | denotes | MMP9 |
T46 | 110-114 | Protein | denotes | MMP9 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T265 | 1-6 | http://www.uniprot.org/uniprot/P01375 | denotes | TNF-α |
T266 | 8-13 | http://www.uniprot.org/uniprot/P01584 | denotes | IL-1β |
T267 | 15-19 | http://www.uniprot.org/uniprot/P05231 | denotes | IL-6 |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T259 | 15-19 | http://purl.obolibrary.org/obo/GO_0005138 | denotes | IL-6 |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T30 | 51-115 | Sentence | denotes | Gelatin zymography was performed to detect the activity of MMP9. |
T8 | 51-115 | Sentence | denotes | Gelatin zymography was performed to detect the activity of MMP9. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T263 | 110-114 | Protein | denotes | MMP9 |
T260 | 8-13 | Protein | denotes | IL-1β |
T261 | 15-19 | Protein | denotes | IL-6 |
T262 | 25-29 | Protein | denotes | MMP9 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T555 | 8-13 | Protein | denotes | IL-1β |
T556 | 15-19 | Protein | denotes | IL-6 |
T557 | 25-29 | Protein | denotes | MMP9 |
T558 | 110-114 | Protein | denotes | MMP9 |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T268 | 8-13 | Protein | denotes | IL-1β |
T269 | 15-19 | Protein | denotes | IL-6 |
T270 | 25-29 | Protein | denotes | MMP9 |
T271 | 110-114 | Protein | denotes | MMP9 |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T274 | 8-13 | Protein | denotes | IL-1β |
T275 | 15-19 | Protein | denotes | IL-6 |
T276 | 25-29 | Protein | denotes | MMP9 |
T277 | 110-114 | Protein | denotes | MMP9 |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T584 | 51-69 | Entity | denotes | Gelatin zymography |
T563 | 107-114 | Protein | denotes | of MMP9 |
T566 | 15-19 | Protein | denotes | IL-6 |
T568 | 132-137 | Protein | denotes | NF-κB |
T573 | 25-29 | Protein | denotes | MMP9 |
T576 | 8-20 | Protein | denotes | IL-1β, IL-6, |
T581 | 1-6 | Protein | denotes | TNF-α |
T583 | 153-181 | Protein | denotes | of proinflammatory cytokines |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T465 | 172-181 | NNS | denotes | cytokines |
T464 | 156-171 | JJ | denotes | proinflammatory |
T463 | 153-155 | IN | denotes | of |
T462 | 142-152 | NN | denotes | expression |
T461 | 138-141 | CC | denotes | and |
T460 | 132-137 | NNP | denotes | NF-κB |
T459 | 129-131 | IN | denotes | of |
T458 | 120-128 | NN | denotes | activity |
T457 | 116-119 | DT | denotes | The |
T456 | 114-115 | . | denotes | . |
T455 | 110-114 | NNP | denotes | MMP9 |
T454 | 107-109 | IN | denotes | of |
T453 | 98-106 | NN | denotes | activity |
T452 | 94-97 | DT | denotes | the |
T451 | 87-93 | VB | denotes | detect |
T450 | 84-86 | TO | denotes | to |
T449 | 74-83 | VBN | denotes | performed |
T448 | 70-73 | VBD | denotes | was |
T447 | 59-69 | NN | denotes | zymography |
T446 | 51-58 | NN | denotes | Gelatin |
T445 | 49-50 | . | denotes | . |
T444 | 40-49 | VBN | denotes | evaluated |
T443 | 35-39 | RB | denotes | also |
T442 | 30-34 | VBD | denotes | were |
T441 | 25-29 | NNP | denotes | MMP9 |
T440 | 21-24 | CC | denotes | and |
T439 | 19-20 | , | denotes | , |
T438 | 15-19 | NNP | denotes | IL-6 |
T437 | 13-14 | , | denotes | , |
T436 | 8-13 | NNP | denotes | IL-1β |
T435 | 6-7 | , | denotes | , |
T434 | 1-6 | NNP | denotes | TNF-α |
R349 | T447 | T449 | nsubjpass | zymography,performed |
R350 | T448 | T449 | auxpass | was,performed |
R351 | T449 | T449 | ROOT | performed,performed |
R352 | T450 | T451 | aux | to,detect |
R353 | T451 | T449 | advcl | detect,performed |
R354 | T452 | T453 | det | the,activity |
R355 | T453 | T451 | dobj | activity,detect |
R356 | T454 | T453 | prep | of,activity |
R357 | T455 | T454 | pobj | MMP9,of |
R358 | T456 | T449 | punct | .,performed |
R359 | T457 | T458 | det | The,activity |
R361 | T459 | T458 | prep | of,activity |
R362 | T460 | T459 | pobj | NF-κB,of |
R363 | T461 | T458 | cc | and,activity |
R364 | T462 | T458 | conj | expression,activity |
R365 | T463 | T462 | prep | of,expression |
R366 | T464 | T465 | amod | proinflammatory,cytokines |
R367 | T465 | T463 | pobj | cytokines,of |
R337 | T435 | T434 | punct | ",",TNF-α |
R338 | T436 | T434 | conj | IL-1β,TNF-α |
R339 | T437 | T436 | punct | ",",IL-1β |
R340 | T438 | T436 | conj | IL-6,IL-1β |
R341 | T439 | T438 | punct | ",",IL-6 |
R342 | T440 | T438 | cc | and,IL-6 |
R343 | T441 | T438 | conj | MMP9,IL-6 |
R344 | T442 | T444 | auxpass | were,evaluated |
R345 | T443 | T444 | advmod | also,evaluated |
R346 | T444 | T444 | ROOT | evaluated,evaluated |
R347 | T445 | T444 | punct | .,evaluated |
R348 | T446 | T447 | compound | Gelatin,zymography |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T305 | 132-137 | Protein | denotes | NF-κB |
T304 | 110-114 | Protein | denotes | MMP9 |
T303 | 25-29 | Protein | denotes | MMP9 |
T302 | 15-19 | Protein | denotes | IL-6 |
T301 | 8-13 | Protein | denotes | IL-1β |
T300 | 1-6 | Protein | denotes | TNF-α |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9 | 110-114 | Protein | denotes | MMP9 |
T8 | 25-29 | Protein | denotes | MMP9 |
T7 | 15-19 | Protein | denotes | IL-6 |
T6 | 8-13 | Protein | denotes | IL-1β |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20 | 110-114 | Protein | denotes | MMP9 |
T19 | 25-29 | Protein | denotes | MMP9 |
T18 | 15-19 | Protein | denotes | IL-6 |
T17 | 8-13 | Protein | denotes | IL-1β |
T15 | 110-114 | Protein | denotes | MMP9 |
T14 | 25-29 | Protein | denotes | MMP9 |
T13 | 15-19 | Protein | denotes | IL-6 |
T12 | 8-13 | Protein | denotes | IL-1β |