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PMC:3317373 / 733-921 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T183 84-86 TO denotes to
T182 74-83 VB denotes performed
T181 70-73 VB denotes was
T180 59-69 NN denotes zymography
T179 51-58 NN denotes Gelatin
T178 40-49 VB denotes evaluated
T177 35-39 RB denotes also
T176 30-34 VB denotes were
T175 25-29 NN denotes MMP9
T174 21-24 CC denotes and
T173 19-20 -COMMA- denotes ,
T172 15-19 NN denotes IL-6
T171 13-14 -COMMA- denotes ,
T170 8-13 NN denotes IL-1β
T169 6-7 -COMMA- denotes ,
T168 1-6 NN denotes TNF-α
T197 172-181 NN denotes cytokines
T196 156-171 JJ denotes proinflammatory
T195 153-155 IN denotes of
T194 142-152 NN denotes expression
T193 138-141 CC denotes and
T192 132-137 NN denotes NF-κB
T191 129-131 IN denotes of
T190 120-128 NN denotes activity
T189 116-119 DT denotes The
T188 110-114 NN denotes MMP9
T187 107-109 IN denotes of
T186 98-106 NN denotes activity
T185 94-97 DT denotes the
T184 87-93 VB denotes detect
R120 T168 T169 arg1Of TNF-α,","
R121 T169 T171 arg1Of ",",","
R122 T170 T169 arg2Of IL-1β,","
R123 T171 T174 arg1Of ",",and
R124 T172 T171 arg2Of IL-6,","
R126 T174 T173 arg1Of and,","
R127 T175 T174 arg2Of MMP9,and
R128 T178 T176 arg2Of evaluated,were
R129 T178 T177 arg1Of evaluated,also
R130 T180 T179 arg1Of zymography,Gelatin
R131 T180 T181 arg1Of zymography,was
R132 T180 T182 arg2Of zymography,performed
R133 T182 T181 arg2Of performed,was
R134 T184 T182 arg3Of detect,performed
R135 T184 T183 arg1Of detect,to
R136 T186 T184 arg2Of activity,detect
R137 T186 T185 arg1Of activity,the
R138 T186 T187 arg1Of activity,of
R139 T188 T187 arg2Of MMP9,of
R140 T190 T189 arg1Of activity,The
R141 T190 T191 arg1Of activity,of
R144 T192 T193 arg1Of NF-κB,and
R145 T193 T191 arg2Of and,of
R146 T193 T195 arg1Of and,of
R147 T194 T193 arg2Of expression,and
R148 T197 T195 arg2Of cytokines,of
R149 T197 T196 arg1Of cytokines,proinflammatory

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T43 8-13 Protein denotes IL-1β
T44 15-19 Protein denotes IL-6
T45 25-29 Protein denotes MMP9
T46 110-114 Protein denotes MMP9

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T265 1-6 http://www.uniprot.org/uniprot/P01375 denotes TNF-α
T266 8-13 http://www.uniprot.org/uniprot/P01584 denotes IL-1β
T267 15-19 http://www.uniprot.org/uniprot/P05231 denotes IL-6

GO-MF

Id Subject Object Predicate Lexical cue
T259 15-19 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6

sentences

Id Subject Object Predicate Lexical cue
T30 51-115 Sentence denotes Gelatin zymography was performed to detect the activity of MMP9.
T8 51-115 Sentence denotes Gelatin zymography was performed to detect the activity of MMP9.

simple1

Id Subject Object Predicate Lexical cue
T263 110-114 Protein denotes MMP9
T260 8-13 Protein denotes IL-1β
T261 15-19 Protein denotes IL-6
T262 25-29 Protein denotes MMP9

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T555 8-13 Protein denotes IL-1β
T556 15-19 Protein denotes IL-6
T557 25-29 Protein denotes MMP9
T558 110-114 Protein denotes MMP9

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T268 8-13 Protein denotes IL-1β
T269 15-19 Protein denotes IL-6
T270 25-29 Protein denotes MMP9
T271 110-114 Protein denotes MMP9

DLUT931

Id Subject Object Predicate Lexical cue
T274 8-13 Protein denotes IL-1β
T275 15-19 Protein denotes IL-6
T276 25-29 Protein denotes MMP9
T277 110-114 Protein denotes MMP9

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T584 51-69 Entity denotes Gelatin zymography
T563 107-114 Protein denotes of MMP9
T566 15-19 Protein denotes IL-6
T568 132-137 Protein denotes NF-κB
T573 25-29 Protein denotes MMP9
T576 8-20 Protein denotes IL-1β, IL-6,
T581 1-6 Protein denotes TNF-α
T583 153-181 Protein denotes of proinflammatory cytokines

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T465 172-181 NNS denotes cytokines
T464 156-171 JJ denotes proinflammatory
T463 153-155 IN denotes of
T462 142-152 NN denotes expression
T461 138-141 CC denotes and
T460 132-137 NNP denotes NF-κB
T459 129-131 IN denotes of
T458 120-128 NN denotes activity
T457 116-119 DT denotes The
T456 114-115 . denotes .
T455 110-114 NNP denotes MMP9
T454 107-109 IN denotes of
T453 98-106 NN denotes activity
T452 94-97 DT denotes the
T451 87-93 VB denotes detect
T450 84-86 TO denotes to
T449 74-83 VBN denotes performed
T448 70-73 VBD denotes was
T447 59-69 NN denotes zymography
T446 51-58 NN denotes Gelatin
T445 49-50 . denotes .
T444 40-49 VBN denotes evaluated
T443 35-39 RB denotes also
T442 30-34 VBD denotes were
T441 25-29 NNP denotes MMP9
T440 21-24 CC denotes and
T439 19-20 , denotes ,
T438 15-19 NNP denotes IL-6
T437 13-14 , denotes ,
T436 8-13 NNP denotes IL-1β
T435 6-7 , denotes ,
T434 1-6 NNP denotes TNF-α
R349 T447 T449 nsubjpass zymography,performed
R350 T448 T449 auxpass was,performed
R351 T449 T449 ROOT performed,performed
R352 T450 T451 aux to,detect
R353 T451 T449 advcl detect,performed
R354 T452 T453 det the,activity
R355 T453 T451 dobj activity,detect
R356 T454 T453 prep of,activity
R357 T455 T454 pobj MMP9,of
R358 T456 T449 punct .,performed
R359 T457 T458 det The,activity
R361 T459 T458 prep of,activity
R362 T460 T459 pobj NF-κB,of
R363 T461 T458 cc and,activity
R364 T462 T458 conj expression,activity
R365 T463 T462 prep of,expression
R366 T464 T465 amod proinflammatory,cytokines
R367 T465 T463 pobj cytokines,of
R337 T435 T434 punct ",",TNF-α
R338 T436 T434 conj IL-1β,TNF-α
R339 T437 T436 punct ",",IL-1β
R340 T438 T436 conj IL-6,IL-1β
R341 T439 T438 punct ",",IL-6
R342 T440 T438 cc and,IL-6
R343 T441 T438 conj MMP9,IL-6
R344 T442 T444 auxpass were,evaluated
R345 T443 T444 advmod also,evaluated
R346 T444 T444 ROOT evaluated,evaluated
R347 T445 T444 punct .,evaluated
R348 T446 T447 compound Gelatin,zymography

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T305 132-137 Protein denotes NF-κB
T304 110-114 Protein denotes MMP9
T303 25-29 Protein denotes MMP9
T302 15-19 Protein denotes IL-6
T301 8-13 Protein denotes IL-1β
T300 1-6 Protein denotes TNF-α

testone

Id Subject Object Predicate Lexical cue
T9 110-114 Protein denotes MMP9
T8 25-29 Protein denotes MMP9
T7 15-19 Protein denotes IL-6
T6 8-13 Protein denotes IL-1β

test3

Id Subject Object Predicate Lexical cue
T20 110-114 Protein denotes MMP9
T19 25-29 Protein denotes MMP9
T18 15-19 Protein denotes IL-6
T17 8-13 Protein denotes IL-1β
T15 110-114 Protein denotes MMP9
T14 25-29 Protein denotes MMP9
T13 15-19 Protein denotes IL-6
T12 8-13 Protein denotes IL-1β