PMC:3317373 / 696-820
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T183 | 121-123 | TO | denotes | to |
| T182 | 111-120 | VB | denotes | performed |
| T181 | 107-110 | VB | denotes | was |
| T180 | 96-106 | NN | denotes | zymography |
| T179 | 88-95 | NN | denotes | Gelatin |
| T178 | 77-86 | VB | denotes | evaluated |
| T177 | 72-76 | RB | denotes | also |
| T176 | 67-71 | VB | denotes | were |
| T175 | 62-66 | NN | denotes | MMP9 |
| T174 | 58-61 | CC | denotes | and |
| T173 | 56-57 | -COMMA- | denotes | , |
| T172 | 52-56 | NN | denotes | IL-6 |
| T171 | 50-51 | -COMMA- | denotes | , |
| T170 | 45-50 | NN | denotes | IL-1β |
| T169 | 43-44 | -COMMA- | denotes | , |
| T168 | 38-43 | NN | denotes | TNF-α |
| T167 | 35-37 | IN | denotes | of |
| T166 | 28-34 | NN | denotes | levels |
| T165 | 20-27 | NN | denotes | protein |
| T164 | 16-19 | CC | denotes | and |
| T163 | 11-15 | NN | denotes | mRNA |
| T162 | 7-10 | DT | denotes | The |
| T161 | 1-5 | NN | denotes | EMSA |
| R112 | T163 | T164 | arg1Of | mRNA,and |
| R113 | T165 | T164 | arg2Of | protein,and |
| R114 | T166 | T162 | arg1Of | levels,The |
| R115 | T166 | T163 | arg1Of | levels,mRNA |
| R116 | T166 | T165 | arg1Of | levels,protein |
| R117 | T166 | T167 | arg1Of | levels,of |
| R118 | T166 | T176 | arg1Of | levels,were |
| R119 | T166 | T178 | arg2Of | levels,evaluated |
| R120 | T168 | T169 | arg1Of | TNF-α,"," |
| R121 | T169 | T171 | arg1Of | ",","," |
| R122 | T170 | T169 | arg2Of | IL-1β,"," |
| R123 | T171 | T174 | arg1Of | ",",and |
| R124 | T172 | T171 | arg2Of | IL-6,"," |
| R125 | T174 | T167 | arg2Of | and,of |
| R126 | T174 | T173 | arg1Of | and,"," |
| R127 | T175 | T174 | arg2Of | MMP9,and |
| R128 | T178 | T176 | arg2Of | evaluated,were |
| R129 | T178 | T177 | arg1Of | evaluated,also |
| R130 | T180 | T179 | arg1Of | zymography,Gelatin |
| R131 | T180 | T181 | arg1Of | zymography,was |
| R132 | T180 | T182 | arg2Of | zymography,performed |
| R133 | T182 | T181 | arg2Of | performed,was |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T43 | 45-50 | Protein | denotes | IL-1β |
| T44 | 52-56 | Protein | denotes | IL-6 |
| T45 | 62-66 | Protein | denotes | MMP9 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T265 | 38-43 | http://www.uniprot.org/uniprot/P01375 | denotes | TNF-α |
| T266 | 45-50 | http://www.uniprot.org/uniprot/P01584 | denotes | IL-1β |
| T267 | 52-56 | http://www.uniprot.org/uniprot/P05231 | denotes | IL-6 |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T259 | 52-56 | http://purl.obolibrary.org/obo/GO_0005138 | denotes | IL-6 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29 | 7-87 | Sentence | denotes | The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated. |
| T7 | 7-87 | Sentence | denotes | The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated. |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T260 | 45-50 | Protein | denotes | IL-1β |
| T261 | 52-56 | Protein | denotes | IL-6 |
| T262 | 62-66 | Protein | denotes | MMP9 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T555 | 45-50 | Protein | denotes | IL-1β |
| T556 | 52-56 | Protein | denotes | IL-6 |
| T557 | 62-66 | Protein | denotes | MMP9 |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T268 | 45-50 | Protein | denotes | IL-1β |
| T269 | 52-56 | Protein | denotes | IL-6 |
| T270 | 62-66 | Protein | denotes | MMP9 |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T274 | 45-50 | Protein | denotes | IL-1β |
| T275 | 52-56 | Protein | denotes | IL-6 |
| T276 | 62-66 | Protein | denotes | MMP9 |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T584 | 88-106 | Entity | denotes | Gelatin zymography |
| T566 | 52-56 | Protein | denotes | IL-6 |
| T573 | 62-66 | Protein | denotes | MMP9 |
| T576 | 45-57 | Protein | denotes | IL-1β, IL-6, |
| T578 | 11-15 | Protein | denotes | mRNA |
| T581 | 38-43 | Protein | denotes | TNF-α |
| T582 | 20-27 | Protein | denotes | protein |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T450 | 121-123 | TO | denotes | to |
| T449 | 111-120 | VBN | denotes | performed |
| T448 | 107-110 | VBD | denotes | was |
| T447 | 96-106 | NN | denotes | zymography |
| T446 | 88-95 | NN | denotes | Gelatin |
| T445 | 86-87 | . | denotes | . |
| T444 | 77-86 | VBN | denotes | evaluated |
| T443 | 72-76 | RB | denotes | also |
| T442 | 67-71 | VBD | denotes | were |
| T441 | 62-66 | NNP | denotes | MMP9 |
| T440 | 58-61 | CC | denotes | and |
| T439 | 56-57 | , | denotes | , |
| T438 | 52-56 | NNP | denotes | IL-6 |
| T437 | 50-51 | , | denotes | , |
| T436 | 45-50 | NNP | denotes | IL-1β |
| T435 | 43-44 | , | denotes | , |
| T434 | 38-43 | NNP | denotes | TNF-α |
| T433 | 35-37 | IN | denotes | of |
| T432 | 28-34 | NNS | denotes | levels |
| T431 | 20-27 | NN | denotes | protein |
| T430 | 16-19 | CC | denotes | and |
| T429 | 11-15 | NNP | denotes | mRNA |
| T428 | 7-10 | DT | denotes | The |
| T427 | 5-6 | . | denotes | . |
| T426 | 1-5 | NNP | denotes | EMSA |
| R330 | T428 | T429 | det | The,mRNA |
| R331 | T429 | T444 | nsubjpass | mRNA,evaluated |
| R332 | T430 | T429 | cc | and,mRNA |
| R333 | T431 | T432 | compound | protein,levels |
| R334 | T432 | T429 | conj | levels,mRNA |
| R335 | T433 | T432 | prep | of,levels |
| R349 | T447 | T449 | nsubjpass | zymography,performed |
| R350 | T448 | T449 | auxpass | was,performed |
| R351 | T449 | T449 | ROOT | performed,performed |
| R336 | T434 | T433 | pobj | TNF-α,of |
| R337 | T435 | T434 | punct | ",",TNF-α |
| R338 | T436 | T434 | conj | IL-1β,TNF-α |
| R339 | T437 | T436 | punct | ",",IL-1β |
| R340 | T438 | T436 | conj | IL-6,IL-1β |
| R341 | T439 | T438 | punct | ",",IL-6 |
| R342 | T440 | T438 | cc | and,IL-6 |
| R343 | T441 | T438 | conj | MMP9,IL-6 |
| R344 | T442 | T444 | auxpass | were,evaluated |
| R345 | T443 | T444 | advmod | also,evaluated |
| R346 | T444 | T444 | ROOT | evaluated,evaluated |
| R347 | T445 | T444 | punct | .,evaluated |
| R348 | T446 | T447 | compound | Gelatin,zymography |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T303 | 62-66 | Protein | denotes | MMP9 |
| T302 | 52-56 | Protein | denotes | IL-6 |
| T301 | 45-50 | Protein | denotes | IL-1β |
| T300 | 38-43 | Protein | denotes | TNF-α |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8 | 62-66 | Protein | denotes | MMP9 |
| T7 | 52-56 | Protein | denotes | IL-6 |
| T6 | 45-50 | Protein | denotes | IL-1β |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T19 | 62-66 | Protein | denotes | MMP9 |
| T18 | 52-56 | Protein | denotes | IL-6 |
| T17 | 45-50 | Protein | denotes | IL-1β |
| T14 | 62-66 | Protein | denotes | MMP9 |
| T13 | 52-56 | Protein | denotes | IL-6 |
| T12 | 45-50 | Protein | denotes | IL-1β |