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PMC:3317373 / 687-842 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T183 130-132 TO denotes to
T182 120-129 VB denotes performed
T181 116-119 VB denotes was
T180 105-115 NN denotes zymography
T179 97-104 NN denotes Gelatin
T178 86-95 VB denotes evaluated
T177 81-85 RB denotes also
T176 76-80 VB denotes were
T175 71-75 NN denotes MMP9
T174 67-70 CC denotes and
T173 65-66 -COMMA- denotes ,
T172 61-65 NN denotes IL-6
T171 59-60 -COMMA- denotes ,
T170 54-59 NN denotes IL-1β
T169 52-53 -COMMA- denotes ,
T168 47-52 NN denotes TNF-α
T167 44-46 IN denotes of
T166 37-43 NN denotes levels
T165 29-36 NN denotes protein
T164 25-28 CC denotes and
T163 20-24 NN denotes mRNA
T162 16-19 DT denotes The
T161 10-14 NN denotes EMSA
T160 7-9 IN denotes by
T187 153-155 IN denotes of
T186 144-152 NN denotes activity
T185 140-143 DT denotes the
T184 133-139 VB denotes detect
R111 T161 T160 arg2Of EMSA,by
R112 T163 T164 arg1Of mRNA,and
R113 T165 T164 arg2Of protein,and
R114 T166 T162 arg1Of levels,The
R115 T166 T163 arg1Of levels,mRNA
R116 T166 T165 arg1Of levels,protein
R117 T166 T167 arg1Of levels,of
R118 T166 T176 arg1Of levels,were
R119 T166 T178 arg2Of levels,evaluated
R120 T168 T169 arg1Of TNF-α,","
R121 T169 T171 arg1Of ",",","
R122 T170 T169 arg2Of IL-1β,","
R123 T171 T174 arg1Of ",",and
R124 T172 T171 arg2Of IL-6,","
R125 T174 T167 arg2Of and,of
R126 T174 T173 arg1Of and,","
R127 T175 T174 arg2Of MMP9,and
R128 T178 T176 arg2Of evaluated,were
R129 T178 T177 arg1Of evaluated,also
R130 T180 T179 arg1Of zymography,Gelatin
R131 T180 T181 arg1Of zymography,was
R132 T180 T182 arg2Of zymography,performed
R133 T182 T181 arg2Of performed,was
R134 T184 T182 arg3Of detect,performed
R135 T184 T183 arg1Of detect,to
R136 T186 T184 arg2Of activity,detect
R137 T186 T185 arg1Of activity,the
R138 T186 T187 arg1Of activity,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T43 54-59 Protein denotes IL-1β
T44 61-65 Protein denotes IL-6
T45 71-75 Protein denotes MMP9

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T265 47-52 http://www.uniprot.org/uniprot/P01375 denotes TNF-α
T266 54-59 http://www.uniprot.org/uniprot/P01584 denotes IL-1β
T267 61-65 http://www.uniprot.org/uniprot/P05231 denotes IL-6

GO-MF

Id Subject Object Predicate Lexical cue
T259 61-65 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6

sentences

Id Subject Object Predicate Lexical cue
T29 16-96 Sentence denotes The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated.
T7 16-96 Sentence denotes The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated.

simple1

Id Subject Object Predicate Lexical cue
T260 54-59 Protein denotes IL-1β
T261 61-65 Protein denotes IL-6
T262 71-75 Protein denotes MMP9

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T555 54-59 Protein denotes IL-1β
T556 61-65 Protein denotes IL-6
T557 71-75 Protein denotes MMP9

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T268 54-59 Protein denotes IL-1β
T269 61-65 Protein denotes IL-6
T270 71-75 Protein denotes MMP9

DLUT931

Id Subject Object Predicate Lexical cue
T274 54-59 Protein denotes IL-1β
T275 61-65 Protein denotes IL-6
T276 71-75 Protein denotes MMP9

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T584 97-115 Entity denotes Gelatin zymography
T566 61-65 Protein denotes IL-6
T573 71-75 Protein denotes MMP9
T576 54-66 Protein denotes IL-1β, IL-6,
T578 20-24 Protein denotes mRNA
T581 47-52 Protein denotes TNF-α
T582 29-36 Protein denotes protein

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T454 153-155 IN denotes of
T453 144-152 NN denotes activity
T452 140-143 DT denotes the
T451 133-139 VB denotes detect
T450 130-132 TO denotes to
T449 120-129 VBN denotes performed
T448 116-119 VBD denotes was
T447 105-115 NN denotes zymography
T446 97-104 NN denotes Gelatin
T445 95-96 . denotes .
T444 86-95 VBN denotes evaluated
T443 81-85 RB denotes also
T442 76-80 VBD denotes were
T441 71-75 NNP denotes MMP9
T440 67-70 CC denotes and
T439 65-66 , denotes ,
T438 61-65 NNP denotes IL-6
T437 59-60 , denotes ,
T436 54-59 NNP denotes IL-1β
T435 52-53 , denotes ,
T434 47-52 NNP denotes TNF-α
T433 44-46 IN denotes of
T432 37-43 NNS denotes levels
T431 29-36 NN denotes protein
T430 25-28 CC denotes and
T429 20-24 NNP denotes mRNA
T428 16-19 DT denotes The
T427 14-15 . denotes .
T426 10-14 NNP denotes EMSA
T425 7-9 IN denotes by
R328 T426 T425 pobj EMSA,by
R330 T428 T429 det The,mRNA
R331 T429 T444 nsubjpass mRNA,evaluated
R332 T430 T429 cc and,mRNA
R333 T431 T432 compound protein,levels
R334 T432 T429 conj levels,mRNA
R335 T433 T432 prep of,levels
R349 T447 T449 nsubjpass zymography,performed
R350 T448 T449 auxpass was,performed
R351 T449 T449 ROOT performed,performed
R352 T450 T451 aux to,detect
R353 T451 T449 advcl detect,performed
R354 T452 T453 det the,activity
R355 T453 T451 dobj activity,detect
R356 T454 T453 prep of,activity
R336 T434 T433 pobj TNF-α,of
R337 T435 T434 punct ",",TNF-α
R338 T436 T434 conj IL-1β,TNF-α
R339 T437 T436 punct ",",IL-1β
R340 T438 T436 conj IL-6,IL-1β
R341 T439 T438 punct ",",IL-6
R342 T440 T438 cc and,IL-6
R343 T441 T438 conj MMP9,IL-6
R344 T442 T444 auxpass were,evaluated
R345 T443 T444 advmod also,evaluated
R346 T444 T444 ROOT evaluated,evaluated
R347 T445 T444 punct .,evaluated
R348 T446 T447 compound Gelatin,zymography

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T303 71-75 Protein denotes MMP9
T302 61-65 Protein denotes IL-6
T301 54-59 Protein denotes IL-1β
T300 47-52 Protein denotes TNF-α

testone

Id Subject Object Predicate Lexical cue
T8 71-75 Protein denotes MMP9
T7 61-65 Protein denotes IL-6
T6 54-59 Protein denotes IL-1β

test3

Id Subject Object Predicate Lexical cue
T19 71-75 Protein denotes MMP9
T18 61-65 Protein denotes IL-6
T17 54-59 Protein denotes IL-1β
T14 71-75 Protein denotes MMP9
T13 61-65 Protein denotes IL-6
T12 54-59 Protein denotes IL-1β