PMC:3317373 / 677-782 JSONTXT

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    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T178","span":{"begin":96,"end":105},"obj":"VB"},{"id":"T177","span":{"begin":91,"end":95},"obj":"RB"},{"id":"T176","span":{"begin":86,"end":90},"obj":"VB"},{"id":"T175","span":{"begin":81,"end":85},"obj":"NN"},{"id":"T174","span":{"begin":77,"end":80},"obj":"CC"},{"id":"T173","span":{"begin":75,"end":76},"obj":"-COMMA-"},{"id":"T172","span":{"begin":71,"end":75},"obj":"NN"},{"id":"T171","span":{"begin":69,"end":70},"obj":"-COMMA-"},{"id":"T170","span":{"begin":64,"end":69},"obj":"NN"},{"id":"T169","span":{"begin":62,"end":63},"obj":"-COMMA-"},{"id":"T168","span":{"begin":57,"end":62},"obj":"NN"},{"id":"T167","span":{"begin":54,"end":56},"obj":"IN"},{"id":"T166","span":{"begin":47,"end":53},"obj":"NN"},{"id":"T165","span":{"begin":39,"end":46},"obj":"NN"},{"id":"T164","span":{"begin":35,"end":38},"obj":"CC"},{"id":"T163","span":{"begin":30,"end":34},"obj":"NN"},{"id":"T162","span":{"begin":26,"end":29},"obj":"DT"},{"id":"T161","span":{"begin":20,"end":24},"obj":"NN"},{"id":"T160","span":{"begin":17,"end":19},"obj":"IN"},{"id":"T159","span":{"begin":7,"end":16},"obj":"VB"},{"id":"T158","span":{"begin":3,"end":6},"obj":"VB"}],"relations":[{"id":"R109","pred":"arg2Of","subj":"T159","obj":"T158"},{"id":"R110","pred":"arg1Of","subj":"T161","obj":"T159"},{"id":"R111","pred":"arg2Of","subj":"T161","obj":"T160"},{"id":"R112","pred":"arg1Of","subj":"T163","obj":"T164"},{"id":"R113","pred":"arg2Of","subj":"T165","obj":"T164"},{"id":"R114","pred":"arg1Of","subj":"T166","obj":"T162"},{"id":"R115","pred":"arg1Of","subj":"T166","obj":"T163"},{"id":"R116","pred":"arg1Of","subj":"T166","obj":"T165"},{"id":"R117","pred":"arg1Of","subj":"T166","obj":"T167"},{"id":"R118","pred":"arg1Of","subj":"T166","obj":"T176"},{"id":"R119","pred":"arg2Of","subj":"T166","obj":"T178"},{"id":"R120","pred":"arg1Of","subj":"T168","obj":"T169"},{"id":"R121","pred":"arg1Of","subj":"T169","obj":"T171"},{"id":"R122","pred":"arg2Of","subj":"T170","obj":"T169"},{"id":"R123","pred":"arg1Of","subj":"T171","obj":"T174"},{"id":"R124","pred":"arg2Of","subj":"T172","obj":"T171"},{"id":"R125","pred":"arg2Of","subj":"T174","obj":"T167"},{"id":"R126","pred":"arg1Of","subj":"T174","obj":"T173"},{"id":"R127","pred":"arg2Of","subj":"T175","obj":"T174"},{"id":"R128","pred":"arg2Of","subj":"T178","obj":"T176"},{"id":"R129","pred":"arg1Of","subj":"T178","obj":"T177"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"κB was evaluated by EMSA. The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated"}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T43","span":{"begin":64,"end":69},"obj":"Protein"},{"id":"T44","span":{"begin":71,"end":75},"obj":"Protein"},{"id":"T45","span":{"begin":81,"end":85},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"κB was evaluated by EMSA. The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T265","span":{"begin":57,"end":62},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T266","span":{"begin":64,"end":69},"obj":"http://www.uniprot.org/uniprot/P01584"},{"id":"T267","span":{"begin":71,"end":75},"obj":"http://www.uniprot.org/uniprot/P05231"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"κB was evaluated by EMSA. The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated"}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T259","span":{"begin":71,"end":75},"obj":"http://purl.obolibrary.org/obo/GO_0005138"}],"text":"κB was evaluated by EMSA. The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated"}

    simple1

    {"project":"simple1","denotations":[{"id":"T260","span":{"begin":64,"end":69},"obj":"Protein"},{"id":"T261","span":{"begin":71,"end":75},"obj":"Protein"},{"id":"T262","span":{"begin":81,"end":85},"obj":"Protein"}],"text":"κB was evaluated by EMSA. The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated"}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T555","span":{"begin":64,"end":69},"obj":"Protein"},{"id":"T556","span":{"begin":71,"end":75},"obj":"Protein"},{"id":"T557","span":{"begin":81,"end":85},"obj":"Protein"}],"text":"κB was evaluated by EMSA. The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated"}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T268","span":{"begin":64,"end":69},"obj":"Protein"},{"id":"T269","span":{"begin":71,"end":75},"obj":"Protein"},{"id":"T270","span":{"begin":81,"end":85},"obj":"Protein"}],"text":"κB was evaluated by EMSA. The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated"}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T274","span":{"begin":64,"end":69},"obj":"Protein"},{"id":"T275","span":{"begin":71,"end":75},"obj":"Protein"},{"id":"T276","span":{"begin":81,"end":85},"obj":"Protein"}],"text":"κB was evaluated by EMSA. The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated"}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T566","span":{"begin":71,"end":75},"obj":"Protein"},{"id":"T573","span":{"begin":81,"end":85},"obj":"Protein"},{"id":"T576","span":{"begin":64,"end":76},"obj":"Protein"},{"id":"T578","span":{"begin":30,"end":34},"obj":"Protein"},{"id":"T581","span":{"begin":57,"end":62},"obj":"Protein"},{"id":"T582","span":{"begin":39,"end":46},"obj":"Protein"}],"text":"κB was evaluated by EMSA. The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T444","span":{"begin":96,"end":105},"obj":"VBN"},{"id":"T443","span":{"begin":91,"end":95},"obj":"RB"},{"id":"T442","span":{"begin":86,"end":90},"obj":"VBD"},{"id":"T441","span":{"begin":81,"end":85},"obj":"NNP"},{"id":"T440","span":{"begin":77,"end":80},"obj":"CC"},{"id":"T439","span":{"begin":75,"end":76},"obj":","},{"id":"T438","span":{"begin":71,"end":75},"obj":"NNP"},{"id":"T437","span":{"begin":69,"end":70},"obj":","},{"id":"T436","span":{"begin":64,"end":69},"obj":"NNP"},{"id":"T435","span":{"begin":62,"end":63},"obj":","},{"id":"T434","span":{"begin":57,"end":62},"obj":"NNP"},{"id":"T433","span":{"begin":54,"end":56},"obj":"IN"},{"id":"T432","span":{"begin":47,"end":53},"obj":"NNS"},{"id":"T431","span":{"begin":39,"end":46},"obj":"NN"},{"id":"T430","span":{"begin":35,"end":38},"obj":"CC"},{"id":"T429","span":{"begin":30,"end":34},"obj":"NNP"},{"id":"T428","span":{"begin":26,"end":29},"obj":"DT"},{"id":"T427","span":{"begin":24,"end":25},"obj":"."},{"id":"T426","span":{"begin":20,"end":24},"obj":"NNP"},{"id":"T425","span":{"begin":17,"end":19},"obj":"IN"},{"id":"T424","span":{"begin":7,"end":16},"obj":"VBN"},{"id":"T423","span":{"begin":3,"end":6},"obj":"VBD"}],"relations":[{"id":"R325","pred":"auxpass","subj":"T423","obj":"T424"},{"id":"R326","pred":"ROOT","subj":"T424","obj":"T424"},{"id":"R327","pred":"agent","subj":"T425","obj":"T424"},{"id":"R328","pred":"pobj","subj":"T426","obj":"T425"},{"id":"R329","pred":"punct","subj":"T427","obj":"T424"},{"id":"R330","pred":"det","subj":"T428","obj":"T429"},{"id":"R331","pred":"nsubjpass","subj":"T429","obj":"T444"},{"id":"R332","pred":"cc","subj":"T430","obj":"T429"},{"id":"R333","pred":"compound","subj":"T431","obj":"T432"},{"id":"R334","pred":"conj","subj":"T432","obj":"T429"},{"id":"R335","pred":"prep","subj":"T433","obj":"T432"},{"id":"R336","pred":"pobj","subj":"T434","obj":"T433"},{"id":"R337","pred":"punct","subj":"T435","obj":"T434"},{"id":"R338","pred":"conj","subj":"T436","obj":"T434"},{"id":"R339","pred":"punct","subj":"T437","obj":"T436"},{"id":"R340","pred":"conj","subj":"T438","obj":"T436"},{"id":"R341","pred":"punct","subj":"T439","obj":"T438"},{"id":"R342","pred":"cc","subj":"T440","obj":"T438"},{"id":"R343","pred":"conj","subj":"T441","obj":"T438"},{"id":"R344","pred":"auxpass","subj":"T442","obj":"T444"},{"id":"R345","pred":"advmod","subj":"T443","obj":"T444"},{"id":"R346","pred":"ROOT","subj":"T444","obj":"T444"}],"text":"κB was evaluated by EMSA. The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated"}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T303","span":{"begin":81,"end":85},"obj":"Protein"},{"id":"T302","span":{"begin":71,"end":75},"obj":"Protein"},{"id":"T301","span":{"begin":64,"end":69},"obj":"Protein"},{"id":"T300","span":{"begin":57,"end":62},"obj":"Protein"}],"text":"κB was evaluated by EMSA. The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated"}

    testone

    {"project":"testone","denotations":[{"id":"T8","span":{"begin":81,"end":85},"obj":"Protein"},{"id":"T7","span":{"begin":71,"end":75},"obj":"Protein"},{"id":"T6","span":{"begin":64,"end":69},"obj":"Protein"}],"text":"κB was evaluated by EMSA. The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated"}

    test3

    {"project":"test3","denotations":[{"id":"T19","span":{"begin":81,"end":85},"obj":"Protein"},{"id":"T18","span":{"begin":71,"end":75},"obj":"Protein"},{"id":"T17","span":{"begin":64,"end":69},"obj":"Protein"},{"id":"T14","span":{"begin":81,"end":85},"obj":"Protein"},{"id":"T13","span":{"begin":71,"end":75},"obj":"Protein"},{"id":"T12","span":{"begin":64,"end":69},"obj":"Protein"}],"text":"κB was evaluated by EMSA. The mRNA and protein levels of TNF-α, IL-1β, IL-6, and MMP9 were also evaluated"}