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PMC:3317373 / 515-686 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T158 165-168 VB denotes was
T157 159-164 NN denotes NF-κB
T156 156-158 IN denotes of
T155 147-155 NN denotes activity
T154 135-146 JJ denotes DNA-binding
T153 131-134 DT denotes the
T152 126-130 RB denotes Then
T151 119-124 FW denotes vitro
T150 116-118 FW denotes in
T149 109-115 NN denotes injury
T148 99-108 JJ denotes traumatic
T147 95-98 DT denotes the
T146 89-94 VB denotes mimic
T145 86-88 TO denotes to
T144 76-85 VB denotes scratched
T143 71-75 VB denotes were
T142 60-70 NN denotes astrocytes
T141 51-59 VB denotes cultured
T140 43-50 JJ denotes Primary
T139 36-41 FW denotes vitro
T138 33-35 FW denotes in
T137 29-32 NN denotes TBI
T136 26-28 IN denotes of
T135 20-25 NN denotes model
T134 18-19 DT denotes a
T133 15-17 IN denotes in
T132 5-14 NN denotes cytokines
R83 T135 T133 arg2Of model,in
R84 T135 T134 arg1Of model,a
R85 T135 T136 arg1Of model,of
R86 T135 T139 arg1Of model,vitro
R87 T137 T136 arg2Of TBI,of
R88 T139 T138 arg1Of vitro,in
R89 T142 T140 arg1Of astrocytes,Primary
R90 T142 T141 arg2Of astrocytes,cultured
R91 T142 T143 arg1Of astrocytes,were
R92 T142 T144 arg2Of astrocytes,scratched
R93 T142 T146 arg1Of astrocytes,mimic
R94 T144 T143 arg2Of scratched,were
R95 T146 T144 arg3Of mimic,scratched
R96 T146 T145 arg1Of mimic,to
R97 T146 T151 arg1Of mimic,vitro
R98 T149 T146 arg2Of injury,mimic
R99 T149 T147 arg1Of injury,the
R100 T149 T148 arg1Of injury,traumatic
R101 T151 T150 arg1Of vitro,in
R102 T155 T153 arg1Of activity,the
R103 T155 T154 arg1Of activity,DNA-binding
R104 T155 T156 arg1Of activity,of
R105 T155 T158 arg1Of activity,was
R107 T157 T156 arg2Of NF-κB,of

GO-MF

Id Subject Object Predicate Lexical cue
T257 135-146 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA-binding
T258 139-146 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T27 43-125 Sentence denotes Primary cultured astrocytes were scratched to mimic the traumatic injury in vitro.
T5 43-125 Sentence denotes Primary cultured astrocytes were scratched to mimic the traumatic injury in vitro.

ICD10

Id Subject Object Predicate Lexical cue
T256 109-115 http://purl.bioontology.org/ontology/ICD10/T14.9 denotes injury

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T564 156-164 Protein denotes of NF-κB
T577 43-70 Entity denotes Primary cultured astrocytes

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T423 165-168 VBD denotes was
T422 159-164 NN denotes NF-κB
T421 156-158 IN denotes of
T420 147-155 NN denotes activity
T419 135-146 JJ denotes DNA-binding
T418 131-134 DT denotes the
T417 126-130 RB denotes Then
T416 124-125 . denotes .
T415 119-124 NN denotes vitro
T414 116-118 IN denotes in
T413 109-115 NN denotes injury
T412 99-108 JJ denotes traumatic
T411 95-98 DT denotes the
T410 89-94 VB denotes mimic
T409 86-88 TO denotes to
T408 76-85 VBN denotes scratched
T407 71-75 VBD denotes were
T406 60-70 NNS denotes astrocytes
T405 51-59 JJ denotes cultured
T404 43-50 JJ denotes Primary
T403 41-42 . denotes .
T402 36-41 NN denotes vitro
T401 33-35 IN denotes in
T400 29-32 NNP denotes TBI
T399 26-28 IN denotes of
T398 20-25 NN denotes model
T397 18-19 DT denotes a
T396 15-17 IN denotes in
T395 5-14 NNS denotes cytokines
R299 T397 T398 det a,model
R300 T398 T396 pobj model,in
R301 T399 T398 prep of,model
R302 T400 T399 pobj TBI,of
R304 T402 T401 pobj vitro,in
R306 T404 T406 amod Primary,astrocytes
R307 T405 T406 amod cultured,astrocytes
R308 T406 T408 nsubjpass astrocytes,scratched
R309 T407 T408 auxpass were,scratched
R310 T408 T408 ROOT scratched,scratched
R311 T409 T410 aux to,mimic
R312 T410 T408 advcl mimic,scratched
R313 T411 T413 det the,injury
R314 T412 T413 amod traumatic,injury
R315 T413 T410 dobj injury,mimic
R316 T414 T413 prep in,injury
R317 T415 T414 pobj vitro,in
R318 T416 T408 punct .,scratched
R320 T418 T420 det the,activity
R321 T419 T420 amod DNA-binding,activity
R323 T421 T420 prep of,activity
R324 T422 T421 pobj NF-κB,of

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T299 159-164 Protein denotes NF-κB