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PMC:3317373 / 514-732 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T166 210-216 NN denotes levels
T165 202-209 NN denotes protein
T164 198-201 CC denotes and
T163 193-197 NN denotes mRNA
T162 189-192 DT denotes The
T161 183-187 NN denotes EMSA
T160 180-182 IN denotes by
T159 170-179 VB denotes evaluated
T158 166-169 VB denotes was
T157 160-165 NN denotes NF-κB
T156 157-159 IN denotes of
T155 148-156 NN denotes activity
T154 136-147 JJ denotes DNA-binding
T153 132-135 DT denotes the
T152 127-131 RB denotes Then
T151 120-125 FW denotes vitro
T150 117-119 FW denotes in
T149 110-116 NN denotes injury
T148 100-109 JJ denotes traumatic
T147 96-99 DT denotes the
T146 90-95 VB denotes mimic
T145 87-89 TO denotes to
T144 77-86 VB denotes scratched
T143 72-76 VB denotes were
T142 61-71 NN denotes astrocytes
T141 52-60 VB denotes cultured
T140 44-51 JJ denotes Primary
T139 37-42 FW denotes vitro
T138 34-36 FW denotes in
T137 30-33 NN denotes TBI
T136 27-29 IN denotes of
T135 21-26 NN denotes model
T134 19-20 DT denotes a
T133 16-18 IN denotes in
T132 6-15 NN denotes cytokines
R83 T135 T133 arg2Of model,in
R84 T135 T134 arg1Of model,a
R85 T135 T136 arg1Of model,of
R86 T135 T139 arg1Of model,vitro
R87 T137 T136 arg2Of TBI,of
R88 T139 T138 arg1Of vitro,in
R89 T142 T140 arg1Of astrocytes,Primary
R90 T142 T141 arg2Of astrocytes,cultured
R91 T142 T143 arg1Of astrocytes,were
R92 T142 T144 arg2Of astrocytes,scratched
R93 T142 T146 arg1Of astrocytes,mimic
R94 T144 T143 arg2Of scratched,were
R95 T146 T144 arg3Of mimic,scratched
R96 T146 T145 arg1Of mimic,to
R97 T146 T151 arg1Of mimic,vitro
R98 T149 T146 arg2Of injury,mimic
R99 T149 T147 arg1Of injury,the
R100 T149 T148 arg1Of injury,traumatic
R101 T151 T150 arg1Of vitro,in
R102 T155 T153 arg1Of activity,the
R103 T155 T154 arg1Of activity,DNA-binding
R104 T155 T156 arg1Of activity,of
R105 T155 T158 arg1Of activity,was
R106 T155 T159 arg2Of activity,evaluated
R107 T157 T156 arg2Of NF-κB,of
R108 T159 T152 arg1Of evaluated,Then
R109 T159 T158 arg2Of evaluated,was
R110 T161 T159 arg1Of EMSA,evaluated
R111 T161 T160 arg2Of EMSA,by
R112 T163 T164 arg1Of mRNA,and
R113 T165 T164 arg2Of protein,and
R114 T166 T162 arg1Of levels,The
R115 T166 T163 arg1Of levels,mRNA
R116 T166 T165 arg1Of levels,protein

GO-MF

Id Subject Object Predicate Lexical cue
T257 136-147 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA-binding
T258 140-147 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T28 127-188 Sentence denotes Then the DNA-binding activity of NF-κB was evaluated by EMSA.
T27 44-126 Sentence denotes Primary cultured astrocytes were scratched to mimic the traumatic injury in vitro.
T5 44-126 Sentence denotes Primary cultured astrocytes were scratched to mimic the traumatic injury in vitro.
T6 127-188 Sentence denotes Then the DNA-binding activity of NF-κB was evaluated by EMSA.

ICD10

Id Subject Object Predicate Lexical cue
T256 110-116 http://purl.bioontology.org/ontology/ICD10/T14.9 denotes injury

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T564 157-165 Protein denotes of NF-κB
T577 44-71 Entity denotes Primary cultured astrocytes
T578 193-197 Protein denotes mRNA
T582 202-209 Protein denotes protein

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T432 210-216 NNS denotes levels
T431 202-209 NN denotes protein
T430 198-201 CC denotes and
T429 193-197 NNP denotes mRNA
T428 189-192 DT denotes The
T427 187-188 . denotes .
T426 183-187 NNP denotes EMSA
T425 180-182 IN denotes by
T424 170-179 VBN denotes evaluated
T423 166-169 VBD denotes was
T422 160-165 NN denotes NF-κB
T421 157-159 IN denotes of
T420 148-156 NN denotes activity
T419 136-147 JJ denotes DNA-binding
T418 132-135 DT denotes the
T417 127-131 RB denotes Then
T416 125-126 . denotes .
T415 120-125 NN denotes vitro
T414 117-119 IN denotes in
T413 110-116 NN denotes injury
T412 100-109 JJ denotes traumatic
T411 96-99 DT denotes the
T410 90-95 VB denotes mimic
T409 87-89 TO denotes to
T408 77-86 VBN denotes scratched
T407 72-76 VBD denotes were
T406 61-71 NNS denotes astrocytes
T405 52-60 JJ denotes cultured
T404 44-51 JJ denotes Primary
T403 42-43 . denotes .
T402 37-42 NN denotes vitro
T401 34-36 IN denotes in
T400 30-33 NNP denotes TBI
T399 27-29 IN denotes of
T398 21-26 NN denotes model
T397 19-20 DT denotes a
T396 16-18 IN denotes in
T395 6-15 NNS denotes cytokines
R299 T397 T398 det a,model
R300 T398 T396 pobj model,in
R301 T399 T398 prep of,model
R302 T400 T399 pobj TBI,of
R304 T402 T401 pobj vitro,in
R306 T404 T406 amod Primary,astrocytes
R307 T405 T406 amod cultured,astrocytes
R308 T406 T408 nsubjpass astrocytes,scratched
R309 T407 T408 auxpass were,scratched
R310 T408 T408 ROOT scratched,scratched
R311 T409 T410 aux to,mimic
R312 T410 T408 advcl mimic,scratched
R313 T411 T413 det the,injury
R314 T412 T413 amod traumatic,injury
R315 T413 T410 dobj injury,mimic
R316 T414 T413 prep in,injury
R317 T415 T414 pobj vitro,in
R318 T416 T408 punct .,scratched
R319 T417 T424 advmod Then,evaluated
R320 T418 T420 det the,activity
R321 T419 T420 amod DNA-binding,activity
R322 T420 T424 nsubjpass activity,evaluated
R323 T421 T420 prep of,activity
R324 T422 T421 pobj NF-κB,of
R325 T423 T424 auxpass was,evaluated
R326 T424 T424 ROOT evaluated,evaluated
R327 T425 T424 agent by,evaluated
R328 T426 T425 pobj EMSA,by
R329 T427 T424 punct .,evaluated
R330 T428 T429 det The,mRNA
R332 T430 T429 cc and,mRNA
R333 T431 T432 compound protein,levels
R334 T432 T429 conj levels,mRNA

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T299 160-165 Protein denotes NF-κB