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PMC:3317373 / 5025-5401 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T2149 357-369 NN denotes sextuplicate
T2148 354-356 IN denotes in
T2147 344-353 VB denotes performed
T2146 339-343 VB denotes were
T2145 326-338 NN denotes measurements
T2144 322-325 DT denotes All
T2143 319-320 -RRB- denotes )
T2142 316-319 NNP denotes USA
T2141 314-315 -COMMA- denotes ,
T2140 312-314 NNP denotes CA
T2139 310-311 -COMMA- denotes ,
T2138 298-310 NNP denotes Laboratories
T2137 290-297 NNP denotes Bio-Rad
T2136 289-290 -LRB- denotes (
T2135 282-288 NN denotes reader
T2134 271-281 NN denotes microplate
T2133 265-270 NN denotes ELISA
T2132 257-264 JJ denotes Bio-Rad
T2131 255-256 DT denotes a
T2130 249-254 VB denotes using
T2129 246-248 NN denotes nm
T2128 242-245 CD denotes 450
T2127 239-241 IN denotes at
T2126 234-238 VB denotes read
T2125 230-233 VB denotes was
T2124 224-229 NN denotes value
T2123 221-223 NN denotes OD
T2122 216-220 RB denotes Then
T2121 213-214 NN denotes h
T2120 211-212 CD denotes 1
T2119 207-210 IN denotes for
T2118 197-206 VB denotes incubated
T2117 193-196 CC denotes and
T2116 188-192 RB denotes well
T2115 182-187 DT denotes every
T2114 177-181 IN denotes into
T2113 171-176 VB denotes added
T2112 167-170 VB denotes was
T2111 161-166 NN denotes CCK-8
T2110 158-160 NN denotes μL
T2109 155-157 CD denotes 10
T2108 153-154 -COMMA- denotes ,
T2107 146-153 NNP denotes Briefly
T2106 136-144 NN denotes protocol
T2105 133-135 POS denotes 's
T2104 121-133 NN denotes manufacturer
T2103 117-120 DT denotes the
T2102 114-116 TO denotes to
T2101 104-113 VB denotes according
T2100 96-103 NN denotes scratch
T2099 90-95 IN denotes after
T2098 88-89 NN denotes h
T2097 85-87 CD denotes 24
T2096 79-84 NN denotes assay
T2095 77-78 -RRB- denotes )
T2094 72-77 NNP denotes Japan
T2093 70-71 -COMMA- denotes ,
T2092 63-70 NNP denotes Dojindo
T2091 62-63 -LRB- denotes (
T2090 60-61 -RRB- denotes )
T2089 55-60 NN denotes CCK-8
T2088 54-55 -LRB- denotes (
T2087 48-53 NN denotes kit-8
T2086 39-47 NN denotes counting
T2085 34-38 NN denotes cell
T2084 31-33 IN denotes by
T2083 22-30 VB denotes assessed
T2082 18-21 VB denotes was
T2081 12-17 NN denotes death
T2080 7-11 NN denotes cell
R1759 T2081 T2080 arg1Of death,cell
R1760 T2081 T2082 arg1Of death,was
R1761 T2081 T2083 arg2Of death,assessed
R1762 T2083 T2082 arg2Of assessed,was
R1763 T2083 T2091 arg1Of assessed,(
R1764 T2083 T2101 arg1Of assessed,according
R1765 T2087 T2083 arg1Of kit-8,assessed
R1766 T2087 T2084 arg2Of kit-8,by
R1767 T2087 T2085 arg1Of kit-8,cell
R1768 T2087 T2086 arg1Of kit-8,counting
R1769 T2087 T2088 arg1Of kit-8,(
R1770 T2089 T2088 arg2Of CCK-8,(
R1771 T2090 T2088 arg3Of ),(
R1772 T2092 T2091 arg2Of Dojindo,(
R1773 T2092 T2093 arg1Of Dojindo,","
R1774 T2094 T2093 arg2Of Japan,","
R1775 T2095 T2091 arg3Of ),(
R1776 T2098 T2096 arg1Of h,assay
R1777 T2098 T2097 arg1Of h,24
R1778 T2098 T2099 arg1Of h,after
R1779 T2100 T2099 arg2Of scratch,after
R1780 T2101 T2098 arg1Of according,h
R1781 T2102 T2101 arg2Of to,according
R1782 T2104 T2103 arg1Of manufacturer,the
R1783 T2104 T2105 arg2Of manufacturer,'s
R1784 T2106 T2102 arg2Of protocol,to
R1785 T2106 T2105 arg1Of protocol,'s
R1786 T2107 T2108 arg1Of Briefly,","
R1787 T2107 T2112 arg1Of Briefly,was
R1788 T2107 T2113 arg2Of Briefly,added
R1789 T2107 T2118 arg2Of Briefly,incubated
R1790 T2111 T2108 arg2Of CCK-8,","
R1791 T2111 T2109 arg1Of CCK-8,10
R1792 T2111 T2110 arg1Of CCK-8,μL
R1793 T2113 T2114 arg1Of added,into
R1794 T2113 T2117 arg1Of added,and
R1795 T2116 T2114 arg2Of well,into
R1796 T2116 T2115 arg1Of well,every
R1797 T2117 T2112 arg2Of and,was
R1798 T2118 T2117 arg2Of incubated,and
R1799 T2118 T2119 arg1Of incubated,for
R1800 T2121 T2119 arg2Of h,for
R1801 T2121 T2120 arg1Of h,1
R1802 T2124 T2123 arg1Of value,OD
R1803 T2124 T2125 arg1Of value,was
R1804 T2124 T2126 arg2Of value,read
R1805 T2124 T2130 arg1Of value,using
R1806 T2126 T2122 arg1Of read,Then
R1807 T2126 T2125 arg2Of read,was
R1808 T2126 T2127 arg1Of read,at
R1809 T2126 T2130 modOf read,using
R1810 T2129 T2127 arg2Of nm,at
R1811 T2129 T2128 arg1Of nm,450
R1812 T2130 T2136 arg1Of using,(
R1813 T2135 T2130 arg2Of reader,using
R1814 T2135 T2131 arg1Of reader,a
R1815 T2135 T2132 arg1Of reader,Bio-Rad
R1816 T2135 T2133 arg1Of reader,ELISA
R1817 T2135 T2134 arg1Of reader,microplate
R1818 T2138 T2136 arg2Of Laboratories,(
R1819 T2138 T2137 arg1Of Laboratories,Bio-Rad
R1820 T2138 T2139 arg1Of Laboratories,","
R1821 T2140 T2139 arg2Of CA,","
R1822 T2140 T2141 arg1Of CA,","
R1823 T2142 T2141 arg2Of USA,","
R1824 T2143 T2136 arg3Of ),(
R1825 T2145 T2144 arg1Of measurements,All
R1826 T2145 T2146 arg1Of measurements,were
R1827 T2145 T2147 arg2Of measurements,performed
R1828 T2147 T2146 arg2Of performed,were
R1829 T2147 T2148 arg1Of performed,in
R1830 T2149 T2148 arg2Of sextuplicate,in

GO-BP

Id Subject Object Predicate Lexical cue
T2046 312-314 http://purl.obolibrary.org/obo/GO_0033968 denotes CA
T2045 12-17 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T2043 7-17 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death

GO-MF

Id Subject Object Predicate Lexical cue
T2163 312-314 http://purl.obolibrary.org/obo/GO_0033968 denotes CA

GO-CC

Id Subject Object Predicate Lexical cue
T2168 34-38 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T2167 7-11 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T2040 322-370 Sentence denotes All measurements were performed in sextuplicate.
T2039 216-321 Sentence denotes Then OD value was read at 450 nm using a Bio-Rad ELISA microplate reader (Bio-Rad Laboratories, CA, USA).
T2038 146-215 Sentence denotes Briefly, 10 μL CCK-8 was added into every well and incubated for 1 h.
T55 146-215 Sentence denotes Briefly, 10 μL CCK-8 was added into every well and incubated for 1 h.
T56 216-321 Sentence denotes Then OD value was read at 450 nm using a Bio-Rad ELISA microplate reader (Bio-Rad Laboratories, CA, USA).
T57 322-370 Sentence denotes All measurements were performed in sextuplicate.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2307 161-166 Entity denotes CCK-8
T2306 55-60 Entity denotes CCK-8
T2305 211-214 Entity denotes 1 h
T2302 34-38 Entity denotes cell
T2301 85-103 Entity denotes 24 h after scratch

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2280 369-370 . denotes .
T2279 357-369 NN denotes sextuplicate
T2278 354-356 IN denotes in
T2260 255-256 DT denotes a
T2259 249-254 VBG denotes using
T2258 246-248 NN denotes nm
T2257 242-245 CD denotes 450
T2256 239-241 IN denotes at
T2253 224-229 NN denotes value
T2252 221-223 NNP denotes OD
T2251 216-220 RB denotes Then
T2250 214-215 . denotes .
T2249 213-214 NN denotes h
T2248 211-212 CD denotes 1
T2247 207-210 IN denotes for
T2246 197-206 VBN denotes incubated
T2245 193-196 CC denotes and
T2244 188-192 NN denotes well
T2243 182-187 DT denotes every
T2242 177-181 IN denotes into
T2241 171-176 VBN denotes added
T2240 167-170 VBD denotes was
T2239 161-166 NNP denotes CCK-8
T2238 158-160 NNP denotes μL
T2237 155-157 CD denotes 10
T2236 153-154 , denotes ,
T2235 146-153 RB denotes Briefly
T2234 144-145 . denotes .
T2233 136-144 NN denotes protocol
T2232 133-135 POS denotes 's
T2231 121-133 NN denotes manufacturer
T2230 117-120 DT denotes the
T2229 114-116 TO denotes to
T2228 104-113 VBG denotes according
T2227 96-103 NN denotes scratch
T2226 90-95 IN denotes after
T2225 88-89 NN denotes h
T2224 85-87 CD denotes 24
T2223 79-84 NN denotes assay
T2222 77-78 -RRB- denotes )
T2221 72-77 NNP denotes Japan
T2220 70-71 , denotes ,
T2219 63-70 NNP denotes Dojindo
T2218 62-63 -LRB- denotes (
T2217 60-61 -RRB- denotes )
T2216 55-60 NN denotes CCK-8
T2215 54-55 -LRB- denotes (
T2214 48-53 JJ denotes kit-8
T2213 39-47 VBG denotes counting
T2212 34-38 NN denotes cell
T2211 31-33 IN denotes by
T2210 22-30 VBN denotes assessed
T2209 18-21 VBD denotes was
T2208 12-17 NN denotes death
T2207 7-11 NN denotes cell
T2277 344-353 VBN denotes performed
T2276 339-343 VBD denotes were
T2275 326-338 NNS denotes measurements
T2274 322-325 DT denotes All
T2273 320-321 . denotes .
T2272 319-320 -RRB- denotes )
T2271 316-319 NNP denotes USA
T2270 314-315 , denotes ,
T2269 312-314 NNP denotes CA
T2268 310-311 , denotes ,
T2267 298-310 NNPS denotes Laboratories
T2266 290-297 NNP denotes Bio-Rad
T2265 289-290 -LRB- denotes (
T2264 282-288 NN denotes reader
T2263 271-281 NN denotes microplate
T2262 265-270 NNP denotes ELISA
T2261 257-264 NNP denotes Bio-Rad
T2255 234-238 VBN denotes read
T2254 230-233 VBD denotes was
R1880 T2207 T2208 compound cell,death
R1881 T2208 T2210 nsubjpass death,assessed
R1882 T2209 T2210 auxpass was,assessed
R1883 T2210 T2210 ROOT assessed,assessed
R1884 T2211 T2210 agent by,assessed
R1885 T2212 T2211 pobj cell,by
R1886 T2213 T2210 advcl counting,assessed
R1887 T2214 T2216 nmod kit-8,CCK-8
R1888 T2215 T2216 punct (,CCK-8
R1889 T2216 T2223 nmod CCK-8,assay
R1890 T2217 T2216 punct ),CCK-8
R1891 T2218 T2223 punct (,assay
R1892 T2219 T2223 nmod Dojindo,assay
R1893 T2220 T2219 punct ",",Dojindo
R1894 T2221 T2223 nmod Japan,assay
R1895 T2222 T2223 punct ),assay
R1896 T2223 T2228 nsubj assay,according
R1897 T2224 T2225 nummod 24,h
R1898 T2225 T2226 npadvmod h,after
R1899 T2226 T2223 prep after,assay
R1900 T2227 T2226 pobj scratch,after
R1901 T2228 T2210 prep according,assessed
R1902 T2229 T2228 prep to,according
R1903 T2230 T2231 det the,manufacturer
R1904 T2231 T2233 poss manufacturer,protocol
R1905 T2232 T2231 case 's,manufacturer
R1906 T2233 T2229 pobj protocol,to
R1907 T2234 T2210 punct .,assessed
R1908 T2235 T2241 advmod Briefly,added
R1909 T2236 T2241 punct ",",added
R1910 T2237 T2239 nummod 10,CCK-8
R1911 T2238 T2239 compound μL,CCK-8
R1912 T2239 T2241 nsubjpass CCK-8,added
R1913 T2240 T2241 auxpass was,added
R1914 T2241 T2241 ROOT added,added
R1916 T2243 T2244 det every,well
R1917 T2244 T2242 pobj well,into
R1918 T2245 T2241 cc and,added
R1919 T2246 T2241 conj incubated,added
R1920 T2247 T2246 prep for,incubated
R1921 T2248 T2249 nummod 1,h
R1922 T2249 T2247 pobj h,for
R1923 T2250 T2241 punct .,added
R1924 T2251 T2255 advmod Then,read
R1925 T2252 T2253 compound OD,value
R1926 T2253 T2255 nsubjpass value,read
R1927 T2254 T2255 auxpass was,read
R1928 T2255 T2255 ROOT read,read
R1929 T2256 T2255 prep at,read
R1930 T2257 T2258 nummod 450,nm
R1931 T2258 T2256 pobj nm,at
R1932 T2259 T2255 advcl using,read
R1933 T2260 T2264 det a,reader
R1934 T2261 T2264 compound Bio-Rad,reader
R1935 T2262 T2264 compound ELISA,reader
R1936 T2263 T2264 compound microplate,reader
R1937 T2264 T2259 dobj reader,using
R1938 T2265 T2267 punct (,Laboratories
R1939 T2266 T2267 compound Bio-Rad,Laboratories
R1940 T2267 T2264 appos Laboratories,reader
R1941 T2268 T2267 punct ",",Laboratories
R1942 T2269 T2267 conj CA,Laboratories
R1943 T2270 T2269 punct ",",CA
R1944 T2271 T2269 conj USA,CA
R1945 T2272 T2267 punct ),Laboratories
R1946 T2273 T2255 punct .,read
R1947 T2274 T2275 det All,measurements
R1948 T2275 T2277 nsubjpass measurements,performed
R1949 T2276 T2277 auxpass were,performed
R1950 T2277 T2277 ROOT performed,performed
R1951 T2278 T2277 prep in,performed
R1952 T2279 T2278 pobj sextuplicate,in
R1953 T2280 T2277 punct .,performed
R1915 T2242 T2241 prep into,added

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T2170 294-297 Protein denotes Rad
T2169 158-166 Protein denotes μL CCK-8