PMC:3317373 / 14947-15087
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6624 | 138-139 | -RRB- | denotes | ) |
| T6623 | 137-138 | -RRB- | denotes | ) |
| T6622 | 136-137 | NN | denotes | e |
| T6621 | 135-136 | -LRB- | denotes | ( |
| T6620 | 134-135 | CD | denotes | 3 |
| T6619 | 130-133 | CC | denotes | and |
| T6618 | 128-129 | -RRB- | denotes | ) |
| T6617 | 127-128 | DT | denotes | a |
| T6616 | 126-127 | -LRB- | denotes | ( |
| T6615 | 125-126 | CD | denotes | 3 |
| T6614 | 117-124 | NN | denotes | Figures |
| T6613 | 116-117 | -LRB- | denotes | ( |
| T6612 | 114-115 | -RRB- | denotes | ) |
| T6611 | 110-114 | CD | denotes | 0.01 |
| T6610 | 108-109 | SYM | denotes | < |
| T6609 | 106-107 | NN | denotes | P |
| T6608 | 104-105 | -COMMA- | denotes | , |
| T6607 | 99-104 | CD | denotes | 0.068 |
| T6606 | 97-98 | SYM | denotes | ± |
| T6602 | 77-78 | SYM | denotes | ± |
| T6601 | 72-76 | CD | denotes | 1.36 |
| T6600 | 71-72 | -LRB- | denotes | ( |
| T6599 | 67-70 | NN | denotes | TBI |
| T6598 | 64-66 | NN | denotes | WT |
| T6597 | 58-63 | NN | denotes | group |
| T6596 | 55-57 | IN | denotes | in |
| T6595 | 50-54 | IN | denotes | than |
| T6594 | 46-49 | NN | denotes | TBI |
| T6593 | 43-45 | NN | denotes | KO |
| T6592 | 37-42 | NN | denotes | group |
| T6591 | 34-36 | IN | denotes | in |
| T6590 | 27-33 | JJ | denotes | higher |
| T6589 | 23-26 | VB | denotes | was |
| T6588 | 18-22 | NN | denotes | MMP9 |
| T6587 | 15-17 | IN | denotes | of |
| T6586 | 9-14 | NN | denotes | level |
| T6585 | 4-8 | NN | denotes | mRNA |
| T6584 | 0-3 | DT | denotes | The |
| T6605 | 92-96 | CD | denotes | 1.01 |
| T6604 | 85-91 | IN | denotes | versus |
| T6603 | 79-84 | CD | denotes | 0.090 |
| R5461 | T6586 | T6584 | arg1Of | level,The |
| R5462 | T6586 | T6585 | arg1Of | level,mRNA |
| R5463 | T6586 | T6587 | arg1Of | level,of |
| R5464 | T6586 | T6589 | arg1Of | level,was |
| R5465 | T6586 | T6590 | arg1Of | level,higher |
| R5466 | T6588 | T6587 | arg2Of | MMP9,of |
| R5467 | T6589 | T6600 | arg1Of | was,( |
| R5468 | T6589 | T6613 | arg1Of | was,( |
| R5469 | T6590 | T6589 | arg2Of | higher,was |
| R5470 | T6590 | T6591 | arg1Of | higher,in |
| R5471 | T6590 | T6595 | arg1Of | higher,than |
| R5472 | T6594 | T6591 | arg2Of | TBI,in |
| R5473 | T6594 | T6592 | arg1Of | TBI,group |
| R5474 | T6594 | T6593 | arg1Of | TBI,KO |
| R5475 | T6596 | T6595 | arg2Of | in,than |
| R5476 | T6599 | T6596 | arg2Of | TBI,in |
| R5477 | T6599 | T6597 | arg1Of | TBI,group |
| R5478 | T6599 | T6598 | arg1Of | TBI,WT |
| R5479 | T6603 | T6604 | arg1Of | 0.090,versus |
| R5480 | T6605 | T6604 | arg2Of | 1.01,versus |
| R5481 | T6605 | T6606 | arg1Of | 1.01,± |
| R5482 | T6607 | T6600 | arg2Of | 0.068,( |
| R5483 | T6607 | T6601 | arg1Of | 0.068,1.36 |
| R5484 | T6607 | T6602 | arg1Of | 0.068,± |
| R5485 | T6607 | T6603 | arg1Of | 0.068,0.090 |
| R5486 | T6607 | T6608 | arg1Of | 0.068,"," |
| R5487 | T6609 | T6608 | arg2Of | P,"," |
| R5488 | T6609 | T6610 | arg1Of | P,< |
| R5489 | T6609 | T6611 | arg1Of | P,0.01 |
| R5490 | T6612 | T6600 | arg3Of | ),( |
| R5491 | T6615 | T6614 | arg1Of | 3,Figures |
| R5492 | T6615 | T6616 | arg1Of | 3,( |
| R5493 | T6615 | T6617 | arg1Of | 3,a |
| R5494 | T6615 | T6618 | arg1Of | 3,) |
| R5495 | T6615 | T6619 | arg1Of | 3,and |
| R5496 | T6619 | T6613 | arg2Of | and,( |
| R5497 | T6620 | T6619 | arg2Of | 3,and |
| R5498 | T6620 | T6621 | arg1Of | 3,( |
| R5499 | T6622 | T6621 | arg2Of | e,( |
| R5500 | T6623 | T6621 | arg3Of | ),( |
| R5501 | T6624 | T6613 | arg3Of | ),( |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6498 | 18-22 | Protein | denotes | MMP9 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6478 | 0-140 | Sentence | denotes | The mRNA level of MMP9 was higher in group KO TBI than in group WT TBI (1.36 ± 0.090 versus 1.01 ± 0.068, P < 0.01) (Figures 3(a) and 3(e)). |
| T155 | 0-140 | Sentence | denotes | The mRNA level of MMP9 was higher in group KO TBI than in group WT TBI (1.36 ± 0.090 versus 1.01 ± 0.068, P < 0.01) (Figures 3(a) and 3(e)). |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6705 | 18-22 | Protein | denotes | MMP9 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6985 | 9-14 | Transcription | denotes | level |
| T6977 | 18-22 | Protein | denotes | MMP9 |
| R5805 | T6977 | T6985 | themeOf | MMP9,level |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6735 | 27-33 | Positive_regulation | denotes | higher |
| T6734 | 9-14 | Transcription | denotes | level |
| T6726 | 18-22 | Protein | denotes | MMP9 |
| R5584 | T6726 | T6734 | themeOf | MMP9,level |
| R5585 | T6726 | T6735 | themeOf | MMP9,higher |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6721 | 27-33 | Positive_regulation | denotes | higher |
| T6720 | 9-14 | Transcription | denotes | level |
| T6712 | 18-22 | Protein | denotes | MMP9 |
| R5576 | T6712 | T6720 | themeOf | MMP9,level |
| R5579 | T6720 | T6721 | themeOf | level,higher |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7008 | 18-22 | Protein | denotes | MMP9 |
| T7006 | 4-8 | Protein | denotes | mRNA |
| T7004 | 43-45 | Protein | denotes | KO |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6871 | 110-114 | CD | denotes | 0.01 |
| T6870 | 108-109 | VBD | denotes | < |
| T6869 | 106-107 | NNP | denotes | P |
| T6868 | 104-105 | , | denotes | , |
| T6867 | 99-104 | CD | denotes | 0.068 |
| T6866 | 97-98 | CD | denotes | ± |
| T6865 | 92-96 | CD | denotes | 1.01 |
| T6864 | 85-91 | IN | denotes | versus |
| T6863 | 79-84 | CD | denotes | 0.090 |
| T6862 | 77-78 | CD | denotes | ± |
| T6861 | 72-76 | CD | denotes | 1.36 |
| T6860 | 71-72 | -LRB- | denotes | ( |
| T6859 | 67-70 | NNP | denotes | TBI |
| T6858 | 64-66 | NNP | denotes | WT |
| T6857 | 58-63 | NN | denotes | group |
| T6856 | 55-57 | IN | denotes | in |
| T6855 | 50-54 | IN | denotes | than |
| T6854 | 46-49 | NNP | denotes | TBI |
| T6853 | 43-45 | NNP | denotes | KO |
| T6852 | 37-42 | NN | denotes | group |
| T6851 | 34-36 | IN | denotes | in |
| T6850 | 27-33 | JJR | denotes | higher |
| T6849 | 23-26 | VBD | denotes | was |
| T6848 | 18-22 | NNP | denotes | MMP9 |
| T6847 | 15-17 | IN | denotes | of |
| T6846 | 9-14 | NN | denotes | level |
| T6845 | 4-8 | NNP | denotes | mRNA |
| T6844 | 0-3 | DT | denotes | The |
| T6885 | 139-140 | . | denotes | . |
| T6884 | 138-139 | -RRB- | denotes | ) |
| T6883 | 137-138 | -RRB- | denotes | ) |
| T6882 | 136-137 | LS | denotes | e |
| T6881 | 135-136 | -LRB- | denotes | ( |
| T6880 | 134-135 | CD | denotes | 3 |
| T6879 | 130-133 | CC | denotes | and |
| T6878 | 128-129 | -RRB- | denotes | ) |
| T6877 | 127-128 | DT | denotes | a |
| T6876 | 126-127 | -LRB- | denotes | ( |
| T6875 | 125-126 | CD | denotes | 3 |
| T6874 | 117-124 | NNS | denotes | Figures |
| T6873 | 116-117 | -LRB- | denotes | ( |
| T6872 | 114-115 | -RRB- | denotes | ) |
| R5681 | T6844 | T6846 | det | The,level |
| R5682 | T6845 | T6846 | amod | mRNA,level |
| R5683 | T6846 | T6849 | nsubj | level,was |
| R5684 | T6847 | T6846 | prep | of,level |
| R5685 | T6848 | T6847 | pobj | MMP9,of |
| R5686 | T6849 | T6849 | ROOT | was,was |
| R5687 | T6850 | T6849 | acomp | higher,was |
| R5688 | T6851 | T6849 | prep | in,was |
| R5689 | T6852 | T6854 | compound | group,TBI |
| R5690 | T6853 | T6854 | compound | KO,TBI |
| R5691 | T6854 | T6851 | pobj | TBI,in |
| R5692 | T6855 | T6849 | prep | than,was |
| R5693 | T6856 | T6855 | prep | in,than |
| R5694 | T6857 | T6859 | compound | group,TBI |
| R5695 | T6858 | T6859 | compound | WT,TBI |
| R5696 | T6859 | T6856 | pobj | TBI,in |
| R5697 | T6860 | T6859 | punct | (,TBI |
| R5698 | T6861 | T6862 | nummod | 1.36,± |
| R5699 | T6862 | T6870 | nummod | ±,< |
| R5700 | T6863 | T6870 | dep | 0.090,< |
| R5701 | T6864 | T6870 | prep | versus,< |
| R5702 | T6865 | T6866 | nummod | 1.01,± |
| R5703 | T6866 | T6867 | nummod | ±,0.068 |
| R5704 | T6867 | T6864 | pobj | 0.068,versus |
| R5705 | T6868 | T6870 | punct | ",",< |
| R5706 | T6869 | T6870 | nsubj | P,< |
| R5707 | T6870 | T6859 | appos | <,TBI |
| R5708 | T6871 | T6870 | npadvmod | 0.01,< |
| R5709 | T6872 | T6870 | punct | ),< |
| R5710 | T6873 | T6859 | punct | (,TBI |
| R5711 | T6874 | T6873 | dep | Figures,( |
| R5712 | T6875 | T6874 | nummod | 3,Figures |
| R5713 | T6876 | T6877 | punct | (,a |
| R5714 | T6877 | T6875 | parataxis | a,3 |
| R5715 | T6878 | T6877 | punct | ),a |
| R5716 | T6879 | T6875 | cc | and,3 |
| R5717 | T6880 | T6875 | conj | 3,3 |
| R5718 | T6881 | T6882 | punct | (,e |
| R5719 | T6882 | T6874 | parataxis | e,Figures |
| R5720 | T6883 | T6882 | punct | ),e |
| R5721 | T6884 | T6882 | punct | ),e |
| R5722 | T6885 | T6874 | punct | .,Figures |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6756 | 18-22 | Protein | denotes | MMP9 |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6450 | 18-22 | Protein | denotes | MMP9 |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6458 | 18-22 | Protein | denotes | MMP9 |
| T6470 | 18-22 | Protein | denotes | MMP9 |