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PMC:3317373 / 14828-14946 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6583 105-117 NN denotes counterparts
T6582 100-104 NN denotes sham
T6581 94-99 PRP-DOLLAR- denotes their
T6580 89-93 IN denotes with
T6579 80-88 VB denotes compared
T6578 77-79 IN denotes as
T6577 66-76 NN denotes astrocytes
T6576 63-65 NN denotes KO
T6575 59-62 CC denotes and
T6574 56-58 NN denotes WT
T6573 53-55 IN denotes in
T6572 46-52 NN denotes injury
T6571 38-45 NN denotes scratch
T6570 32-37 IN denotes after
T6569 23-31 VB denotes elevated
T6568 19-22 VB denotes was
T6567 14-18 NN denotes MMP9
T6566 11-13 IN denotes of
T6565 0-10 NN denotes Expression
R5441 T6565 T6566 arg1Of Expression,of
R5442 T6565 T6568 arg1Of Expression,was
R5443 T6565 T6569 arg2Of Expression,elevated
R5444 T6567 T6566 arg2Of MMP9,of
R5445 T6569 T6568 arg2Of elevated,was
R5446 T6569 T6570 arg1Of elevated,after
R5447 T6572 T6570 arg2Of injury,after
R5448 T6572 T6571 arg1Of injury,scratch
R5449 T6572 T6573 arg1Of injury,in
R5450 T6572 T6578 arg1Of injury,as
R5451 T6574 T6575 arg1Of WT,and
R5452 T6576 T6575 arg2Of KO,and
R5453 T6577 T6573 arg2Of astrocytes,in
R5454 T6577 T6574 arg1Of astrocytes,WT
R5455 T6577 T6576 arg1Of astrocytes,KO
R5456 T6579 T6578 arg2Of compared,as
R5457 T6579 T6580 arg1Of compared,with
R5458 T6583 T6580 arg2Of counterparts,with
R5459 T6583 T6581 arg1Of counterparts,their
R5460 T6583 T6582 arg1Of counterparts,sham

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T6497 14-18 Protein denotes MMP9

sentences

Id Subject Object Predicate Lexical cue
T6477 0-118 Sentence denotes Expression of MMP9 was elevated after scratch injury in WT and KO astrocytes as compared with their sham counterparts.
T154 0-118 Sentence denotes Expression of MMP9 was elevated after scratch injury in WT and KO astrocytes as compared with their sham counterparts.

ICD10

Id Subject Object Predicate Lexical cue
T6699 46-52 http://purl.bioontology.org/ontology/ICD10/T14.9 denotes injury

simple1

Id Subject Object Predicate Lexical cue
T6704 14-18 Protein denotes MMP9

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T6984 23-31 Positive_regulation denotes elevated
T6983 0-10 Gene_expression denotes Expression
T6976 14-18 Protein denotes MMP9
R5804 T6976 T6983 themeOf MMP9,Expression
R5807 T6983 T6984 themeOf Expression,elevated

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6733 0-10 Gene_expression denotes Expression
T6732 23-31 Positive_regulation denotes elevated
T6725 14-18 Protein denotes MMP9
R5582 T6725 T6733 themeOf MMP9,Expression
R5583 T6725 T6732 themeOf MMP9,elevated
R5588 T6733 T6732 themeOf Expression,elevated

DLUT931

Id Subject Object Predicate Lexical cue
T6719 23-31 Positive_regulation denotes elevated
T6718 0-10 Gene_expression denotes Expression
T6711 14-18 Protein denotes MMP9
R5575 T6711 T6718 themeOf MMP9,Expression
R5578 T6718 T6719 themeOf Expression,elevated

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T7009 0-18 Gene_expression denotes Expression of MMP9
T7005 63-76 Entity denotes KO astrocytes
T7001 63-65 Protein denotes KO
T6999 11-18 Protein denotes of MMP9
T6997 100-104 Entity denotes sham
R5808 T6999 T7009 themeOf of MMP9,Expression of MMP9

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6843 117-118 . denotes .
T6842 105-117 NNS denotes counterparts
T6841 100-104 NN denotes sham
T6840 94-99 PRP$ denotes their
T6839 89-93 IN denotes with
T6838 80-88 VBN denotes compared
T6837 77-79 IN denotes as
T6836 66-76 NNS denotes astrocytes
T6835 63-65 NNP denotes KO
T6834 59-62 CC denotes and
T6833 56-58 NNP denotes WT
T6832 53-55 IN denotes in
T6831 46-52 NN denotes injury
T6830 38-45 NN denotes scratch
T6829 32-37 IN denotes after
T6828 23-31 VBN denotes elevated
T6827 19-22 VBD denotes was
T6826 14-18 NNP denotes MMP9
T6825 11-13 IN denotes of
T6824 0-10 NN denotes Expression
R5661 T6824 T6828 nsubjpass Expression,elevated
R5662 T6825 T6824 prep of,Expression
R5663 T6826 T6825 pobj MMP9,of
R5664 T6827 T6828 auxpass was,elevated
R5665 T6828 T6828 ROOT elevated,elevated
R5666 T6829 T6828 prep after,elevated
R5667 T6830 T6831 compound scratch,injury
R5668 T6831 T6829 pobj injury,after
R5669 T6832 T6831 prep in,injury
R5670 T6833 T6832 pobj WT,in
R5671 T6834 T6833 cc and,WT
R5672 T6835 T6833 conj KO,WT
R5673 T6836 T6828 npadvmod astrocytes,elevated
R5674 T6837 T6828 prep as,elevated
R5675 T6838 T6837 prep compared,as
R5676 T6839 T6838 prep with,compared
R5677 T6840 T6842 poss their,counterparts
R5678 T6841 T6842 amod sham,counterparts
R5679 T6842 T6839 pobj counterparts,with
R5680 T6843 T6828 punct .,elevated

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T6755 23-31 Positive_regulation denotes elevated
T6754 0-10 Gene_expression denotes Expression
T6753 14-18 Protein denotes MMP9
R5594 T6753 T6754 themeOf MMP9,Expression
R5595 T6754 T6755 themeOf Expression,elevated

testone

Id Subject Object Predicate Lexical cue
T6453 0-10 Gene_expression denotes Expression
T6449 14-18 Protein denotes MMP9
R5371 T6449 T6453 themeOf MMP9,Expression

test3

Id Subject Object Predicate Lexical cue
T6457 14-18 Protein denotes MMP9
T6469 23-31 Positive_regulation denotes elevated
T6468 14-18 Protein denotes MMP9
T6467 0-10 Gene_expression denotes Expression
R5373 T6467 T6469 themeOf Expression,elevated
R5374 T6468 T6467 themeOf MMP9,Expression