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PMC:3317373 / 11756-12230 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4942 352-357 WDT denotes which
T4941 350-351 -COMMA- denotes ,
T4940 349-350 -RRB- denotes )
T4939 345-349 CD denotes 0.01
T4938 343-344 SYM denotes <
T4937 341-342 NN denotes P
T4936 340-341 -LRB- denotes (
T4935 338-339 -RRB- denotes )
T4934 333-338 CD denotes 0.098
T4933 331-332 CC denotes ±
T4932 326-330 CD denotes 0.98
T4931 325-326 -LRB- denotes (
T4930 321-324 NN denotes TBI
T4929 318-320 NN denotes WT
T4928 312-317 NN denotes group
T4927 309-311 IN denotes of
T4926 304-308 DT denotes that
T4925 299-303 IN denotes than
T4924 297-298 -RRB- denotes )
T4923 292-297 CD denotes 0.064
T4922 290-291 CC denotes ±
T4921 285-289 CD denotes 0.38
T4920 284-285 -LRB- denotes (
T4919 280-283 NN denotes TBI
T4918 277-279 NN denotes KO
T4917 271-276 NN denotes group
T4916 268-270 IN denotes of
T4915 262-267 NN denotes value
T4914 259-261 NN denotes OD
T4913 253-258 JJ denotes lower
T4912 246-252 VB denotes showed
T4911 241-245 RB denotes also
T4910 235-240 NN denotes assay
T4909 229-234 NN denotes CCK-8
T4908 224-227 NNP denotes TBI
T4907 221-223 NNP denotes KO
T4906 215-220 NN denotes group
T4905 212-214 IN denotes in
T4904 207-211 NN denotes line
T4903 199-206 NN denotes scratch
T4902 196-198 IN denotes of
T4901 190-195 NN denotes sides
T4900 185-189 DT denotes both
T4899 182-184 IN denotes in
T4898 173-181 VB denotes observed
T4897 166-172 RB denotes mostly
T4896 161-165 VB denotes were
T4895 150-160 NN denotes distortion
T4894 142-149 NN denotes process
T4893 130-141 JJ denotes cytoplasmic
T4892 126-129 CC denotes and
T4891 124-125 -COMMA- denotes ,
T4890 120-124 NN denotes lost
T4889 115-119 NN denotes cell
T4888 113-114 -COMMA- denotes ,
T4887 108-113 NN denotes plate
T4886 100-107 NN denotes culture
T4885 95-99 IN denotes from
T4884 84-94 NN denotes detachment
T4883 80-83 DT denotes The
T4882 71-78 NN denotes scratch
T4881 65-70 IN denotes after
T4880 63-64 NN denotes h
T4879 60-62 CD denotes 24
T4878 57-59 IN denotes at
T4877 48-56 NN denotes analysis
T4876 42-47 NN denotes CCK-8
T4875 38-41 CC denotes and
T4874 27-37 NN denotes microscope
T4873 24-26 IN denotes by
T4872 15-23 VB denotes detected
T4871 11-14 VB denotes was
T4870 5-10 NN denotes death
T4869 0-4 NN denotes Cell
T4963 467-473 NN denotes groups
T4962 453-466 JJ denotes sham-operated
T4961 449-452 CD denotes two
T4960 441-448 IN denotes between
T4959 430-440 NN denotes difference
T4958 427-429 DT denotes no
T4957 423-426 VB denotes was
T4956 417-422 EX denotes There
T4955 414-415 -RRB- denotes )
T4954 413-414 CD denotes 1
T4953 406-412 NN denotes Figure
T4952 405-406 -LRB- denotes (
T4951 401-404 NN denotes TBI
T4950 398-400 NN denotes KO
T4949 392-397 NN denotes group
T4948 389-391 IN denotes in
T4947 383-388 NN denotes death
T4946 378-382 NN denotes cell
T4945 373-377 JJ denotes more
T4944 363-372 VB denotes suggested
T4943 358-362 RB denotes also
R4134 T4870 T4869 arg1Of death,Cell
R4135 T4870 T4871 arg1Of death,was
R4136 T4870 T4872 arg2Of death,detected
R4137 T4872 T4871 arg2Of detected,was
R4138 T4874 T4875 arg1Of microscope,and
R4139 T4876 T4875 arg2Of CCK-8,and
R4140 T4877 T4872 arg1Of analysis,detected
R4141 T4877 T4873 arg2Of analysis,by
R4142 T4877 T4874 arg1Of analysis,microscope
R4143 T4877 T4876 arg1Of analysis,CCK-8
R4144 T4877 T4878 arg1Of analysis,at
R4145 T4880 T4878 arg2Of h,at
R4146 T4880 T4879 arg1Of h,24
R4147 T4880 T4881 arg1Of h,after
R4148 T4882 T4881 arg2Of scratch,after
R4149 T4884 T4883 arg1Of detachment,The
R4150 T4884 T4885 arg1Of detachment,from
R4151 T4884 T4896 arg1Of detachment,were
R4152 T4884 T4898 arg2Of detachment,observed
R4153 T4887 T4886 arg1Of plate,culture
R4154 T4887 T4888 arg1Of plate,","
R4155 T4888 T4892 arg1Of ",",and
R4156 T4890 T4888 arg2Of lost,","
R4157 T4890 T4889 arg1Of lost,cell
R4158 T4892 T4885 arg2Of and,from
R4159 T4892 T4891 arg1Of and,","
R4160 T4895 T4892 arg2Of distortion,and
R4161 T4895 T4893 arg1Of distortion,cytoplasmic
R4162 T4895 T4894 arg1Of distortion,process
R4163 T4898 T4896 arg2Of observed,were
R4164 T4898 T4897 arg1Of observed,mostly
R4165 T4898 T4899 arg1Of observed,in
R4166 T4901 T4899 arg2Of sides,in
R4167 T4901 T4900 arg1Of sides,both
R4168 T4901 T4902 arg1Of sides,of
R4169 T4901 T4905 arg1Of sides,in
R4170 T4904 T4902 arg2Of line,of
R4171 T4904 T4903 arg1Of line,scratch
R4172 T4908 T4905 arg2Of TBI,in
R4173 T4908 T4906 arg1Of TBI,group
R4174 T4908 T4907 arg1Of TBI,KO
R4175 T4910 T4909 arg1Of assay,CCK-8
R4176 T4910 T4912 arg1Of assay,showed
R4177 T4912 T4911 arg1Of showed,also
R4178 T4915 T4912 arg2Of value,showed
R4179 T4915 T4913 arg1Of value,lower
R4180 T4915 T4914 arg1Of value,OD
R4181 T4915 T4916 arg1Of value,of
R4182 T4919 T4916 arg2Of TBI,of
R4183 T4919 T4917 arg1Of TBI,group
R4184 T4919 T4918 arg1Of TBI,KO
R4185 T4919 T4920 arg1Of TBI,(
R4186 T4919 T4925 arg1Of TBI,than
R4187 T4921 T4922 arg1Of 0.38,±
R4188 T4922 T4920 arg2Of ±,(
R4189 T4923 T4922 arg2Of 0.064,±
R4190 T4924 T4920 arg3Of ),(
R4191 T4926 T4925 arg2Of that,than
R4192 T4926 T4927 arg1Of that,of
R4193 T4930 T4927 arg2Of TBI,of
R4194 T4930 T4928 arg1Of TBI,group
R4195 T4930 T4929 arg1Of TBI,WT
R4196 T4930 T4931 arg1Of TBI,(
R4197 T4930 T4936 arg1Of TBI,(
R4198 T4930 T4941 arg1Of TBI,","
R4199 T4930 T4942 arg1Of TBI,which
R4200 T4930 T4944 arg1Of TBI,suggested
R4201 T4932 T4933 arg1Of 0.98,±
R4202 T4933 T4931 arg2Of ±,(
R4203 T4934 T4933 arg2Of 0.098,±
R4204 T4935 T4931 arg3Of ),(
R4205 T4937 T4936 arg2Of P,(
R4206 T4937 T4938 arg1Of P,<
R4207 T4937 T4939 arg1Of P,0.01
R4208 T4940 T4936 arg3Of ),(
R4209 T4944 T4943 arg1Of suggested,also
R4210 T4947 T4944 arg2Of death,suggested
R4211 T4947 T4945 arg1Of death,more
R4212 T4947 T4946 arg1Of death,cell
R4213 T4947 T4948 arg1Of death,in
R4214 T4951 T4948 arg2Of TBI,in
R4215 T4951 T4949 arg1Of TBI,group
R4216 T4951 T4950 arg1Of TBI,KO
R4217 T4951 T4952 arg1Of TBI,(
R4218 T4953 T4952 arg2Of Figure,(
R4219 T4953 T4954 arg1Of Figure,1
R4220 T4955 T4952 arg3Of ),(
R4221 T4956 T4957 arg1Of There,was
R4222 T4959 T4957 arg2Of difference,was
R4223 T4959 T4958 arg1Of difference,no
R4224 T4959 T4960 arg1Of difference,between
R4225 T4963 T4960 arg2Of groups,between
R4226 T4963 T4961 arg1Of groups,two
R4227 T4963 T4962 arg1Of groups,sham-operated

GO-BP

Id Subject Object Predicate Lexical cue
T4855 383-388 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T4854 5-10 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T4852 378-388 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T4851 0-10 http://purl.obolibrary.org/obo/GO_0008219 denotes Cell death

GO-CC

Id Subject Object Predicate Lexical cue
T4969 108-119 http://purl.obolibrary.org/obo/GO_0009504 denotes plate, cell
T4968 378-382 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T4967 115-119 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T4966 0-4 http://purl.obolibrary.org/obo/GO_0005623 denotes Cell

sentences

Id Subject Object Predicate Lexical cue
T4849 417-474 Sentence denotes There was no difference between two sham-operated groups.
T4848 229-416 Sentence denotes CCK-8 assay also showed lower OD value of group KO TBI (0.38 ± 0.064) than that of group WT TBI (0.98 ± 0.098) (P < 0.01), which also suggested more cell death in group KO TBI (Figure 1).
T4847 80-228 Sentence denotes The detachment from culture plate, cell lost, and cytoplasmic process distortion were mostly observed in both sides of scratch line in group KO TBI.
T4846 0-79 Sentence denotes Cell death was detected by microscope and CCK-8 analysis at 24 h after scratch.
T126 0-79 Sentence denotes Cell death was detected by microscope and CCK-8 analysis at 24 h after scratch.
T127 80-228 Sentence denotes The detachment from culture plate, cell lost, and cytoplasmic process distortion were mostly observed in both sides of scratch line in group KO TBI.
T128 229-416 Sentence denotes CCK-8 assay also showed lower OD value of group KO TBI (0.38 ± 0.064) than that of group WT TBI (0.98 ± 0.098) (P < 0.01), which also suggested more cell death in group KO TBI (Figure 1).
T129 417-474 Sentence denotes There was no difference between two sham-operated groups.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T5099 392-415 Protein denotes group KO TBI (Figure 1)
T5098 63-78 Entity denotes h after scratch
T5097 221-223 Protein denotes KO
T5096 115-124 Entity denotes cell lost
T5095 277-279 Protein denotes KO
T5094 42-47 Protein denotes CCK-8
T5092 453-466 Entity denotes sham-operated
T5090 229-234 Protein denotes CCK-8

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5087 473-474 . denotes .
T5086 467-473 NNS denotes groups
T5085 453-466 JJ denotes sham-operated
T5084 449-452 CD denotes two
T5083 441-448 IN denotes between
T5082 430-440 NN denotes difference
T5081 427-429 DT denotes no
T5080 423-426 VBD denotes was
T5079 417-422 EX denotes There
T5078 415-416 . denotes .
T5077 414-415 -RRB- denotes )
T5076 413-414 CD denotes 1
T5075 406-412 NNP denotes Figure
T5074 405-406 -LRB- denotes (
T5073 401-404 NNP denotes TBI
T5072 398-400 NNP denotes KO
T5071 392-397 NN denotes group
T5070 389-391 IN denotes in
T5069 383-388 NN denotes death
T5068 378-382 NN denotes cell
T5067 373-377 JJR denotes more
T5066 363-372 VBD denotes suggested
T5065 358-362 RB denotes also
T5062 352-357 WDT denotes which
T5025 215-220 NN denotes group
T5024 212-214 IN denotes in
T5023 207-211 NN denotes line
T5022 199-206 NN denotes scratch
T5021 196-198 IN denotes of
T5020 190-195 NNS denotes sides
T5019 185-189 DT denotes both
T5018 182-184 IN denotes in
T5017 173-181 VBN denotes observed
T5016 166-172 RB denotes mostly
T5015 161-165 VBD denotes were
T5014 150-160 NN denotes distortion
T5013 142-149 NN denotes process
T5012 130-141 JJ denotes cytoplasmic
T5011 126-129 CC denotes and
T5010 124-125 , denotes ,
T5009 120-124 VBD denotes lost
T5008 115-119 NN denotes cell
T5007 113-114 , denotes ,
T5006 108-113 NN denotes plate
T5005 100-107 NN denotes culture
T5004 95-99 IN denotes from
T5003 84-94 NN denotes detachment
T5002 80-83 DT denotes The
T5001 78-79 . denotes .
T5000 71-78 NN denotes scratch
T4999 65-70 IN denotes after
T4998 63-64 NN denotes h
T4997 60-62 CD denotes 24
T4996 57-59 IN denotes at
T4995 48-56 NN denotes analysis
T4994 42-47 NN denotes CCK-8
T4993 38-41 CC denotes and
T4992 27-37 NN denotes microscope
T4991 24-26 IN denotes by
T4990 15-23 VBN denotes detected
T4989 11-14 VBD denotes was
T4988 5-10 NN denotes death
T4987 0-4 NNP denotes Cell
T5027 224-227 NNP denotes TBI
T5026 221-223 NNP denotes KO
T5061 350-351 , denotes ,
T5060 349-350 -RRB- denotes )
T5059 345-349 CD denotes 0.01
T5058 343-344 CD denotes <
T5057 341-342 NNP denotes P
T5056 340-341 -LRB- denotes (
T5055 338-339 -RRB- denotes )
T5054 333-338 CD denotes 0.098
T5053 331-332 CD denotes ±
T5052 326-330 CD denotes 0.98
T5051 325-326 -LRB- denotes (
T5050 321-324 NNP denotes TBI
T5049 318-320 NNP denotes WT
T5048 312-317 NN denotes group
T5047 309-311 IN denotes of
T5046 304-308 DT denotes that
T5045 299-303 IN denotes than
T5044 297-298 -RRB- denotes )
T5043 292-297 CD denotes 0.064
T5042 290-291 CD denotes ±
T5041 285-289 CD denotes 0.38
T5040 284-285 -LRB- denotes (
T5039 280-283 NNP denotes TBI
T5038 277-279 NNP denotes KO
T5037 271-276 NN denotes group
T5036 268-270 IN denotes of
T5035 262-267 NN denotes value
T5034 259-261 NNP denotes OD
T5033 253-258 JJR denotes lower
T5032 246-252 VBD denotes showed
T5031 241-245 RB denotes also
T5030 235-240 NN denotes assay
T5029 229-234 CD denotes CCK-8
T5028 227-228 . denotes .
R4267 T5012 T5014 amod cytoplasmic,distortion
R4268 T5013 T5014 compound process,distortion
R4269 T5014 T5017 nsubjpass distortion,observed
R4270 T5015 T5017 auxpass were,observed
R4271 T5016 T5017 advmod mostly,observed
R4272 T5017 T5009 conj observed,lost
R4273 T5018 T5017 prep in,observed
R4274 T5019 T5020 det both,sides
R4275 T5020 T5018 pobj sides,in
R4276 T5021 T5020 prep of,sides
R4277 T5022 T5023 compound scratch,line
R4278 T5023 T5021 pobj line,of
R4279 T5024 T5023 prep in,line
R4280 T5025 T5027 compound group,TBI
R4281 T5026 T5027 compound KO,TBI
R4282 T5027 T5024 pobj TBI,in
R4283 T5028 T5017 punct .,observed
R4284 T5029 T5030 nummod CCK-8,assay
R4285 T5030 T5032 nsubj assay,showed
R4286 T5031 T5032 advmod also,showed
R4287 T5032 T5032 ROOT showed,showed
R4288 T5033 T5035 amod lower,value
R4289 T5034 T5035 compound OD,value
R4290 T5035 T5032 dobj value,showed
R4291 T5036 T5035 prep of,value
R4292 T5037 T5039 compound group,TBI
R4293 T5038 T5039 compound KO,TBI
R4294 T5039 T5036 pobj TBI,of
R4295 T5040 T5041 punct (,0.38
R4296 T5041 T5043 nummod 0.38,0.064
R4297 T5042 T5043 nummod ±,0.064
R4298 T5043 T5039 appos 0.064,TBI
R4299 T5044 T5032 punct ),showed
R4300 T5045 T5032 prep than,showed
R4301 T5046 T5045 pobj that,than
R4302 T5047 T5046 prep of,that
R4303 T5048 T5047 pobj group,of
R4304 T5049 T5050 compound WT,TBI
R4305 T5050 T5048 appos TBI,group
R4306 T5051 T5052 punct (,0.98
R4307 T5052 T5054 nummod 0.98,0.098
R4308 T5053 T5054 nummod ±,0.098
R4309 T5054 T5048 appos 0.098,group
R4310 T5055 T5032 punct ),showed
R4311 T5056 T5032 punct (,showed
R4312 T5057 T5057 ROOT P,P
R4313 T5058 T5057 nummod <,P
R4314 T5059 T5057 nummod 0.01,P
R4315 T5060 T5057 punct ),P
R4316 T5061 T5057 punct ",",P
R4317 T5062 T5066 nsubj which,suggested
R4319 T5065 T5066 advmod also,suggested
R4320 T5066 T5057 relcl suggested,P
R4321 T5067 T5069 amod more,death
R4322 T5068 T5069 compound cell,death
R4323 T5069 T5066 dobj death,suggested
R4324 T5070 T5069 prep in,death
R4325 T5071 T5073 compound group,TBI
R4326 T5072 T5073 compound KO,TBI
R4327 T5073 T5070 pobj TBI,in
R4328 T5074 T5075 punct (,Figure
R4329 T5075 T5073 appos Figure,TBI
R4330 T5076 T5075 nummod 1,Figure
R4331 T5077 T5073 punct ),TBI
R4332 T5078 T5057 punct .,P
R4333 T5079 T5080 expl There,was
R4334 T5080 T5080 ROOT was,was
R4335 T5081 T5082 det no,difference
R4336 T5082 T5080 attr difference,was
R4337 T5083 T5082 prep between,difference
R4338 T5084 T5086 nummod two,groups
R4339 T5085 T5086 amod sham-operated,groups
R4340 T5086 T5083 pobj groups,between
R4341 T5087 T5080 punct .,was
R4242 T4987 T4988 compound Cell,death
R4243 T4988 T4990 nsubjpass death,detected
R4244 T4989 T4990 auxpass was,detected
R4245 T4990 T4990 ROOT detected,detected
R4246 T4991 T4990 agent by,detected
R4247 T4992 T4991 pobj microscope,by
R4248 T4993 T4992 cc and,microscope
R4249 T4994 T4995 compound CCK-8,analysis
R4250 T4995 T4992 conj analysis,microscope
R4251 T4996 T4995 prep at,analysis
R4252 T4997 T4998 nummod 24,h
R4253 T4998 T4996 pobj h,at
R4254 T4999 T4990 prep after,detected
R4255 T5000 T4999 pobj scratch,after
R4256 T5001 T4990 punct .,detected
R4257 T5002 T5003 det The,detachment
R4258 T5003 T5009 nsubj detachment,lost
R4259 T5004 T5003 prep from,detachment
R4260 T5005 T5006 compound culture,plate
R4261 T5006 T5004 pobj plate,from
R4262 T5007 T5009 punct ",",lost
R4263 T5008 T5009 nsubj cell,lost
R4264 T5009 T5009 ROOT lost,lost
R4265 T5010 T5009 punct ",",lost
R4266 T5011 T5009 cc and,lost