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PMC:3312845 / 986-1149 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T370 160-163 VB denotes was
T369 144-159 NN denotes phosphorylation
T368 133-143 NN denotes p65-Thr435
T367 128-132 RB denotes only
T366 126-127 -COMMA- denotes ,
T365 118-126 NN denotes addition
T364 115-117 IN denotes In
T363 103-113 NN denotes astrocytes
T362 100-102 IN denotes as
T361 95-99 RB denotes well
T360 92-94 RB denotes as
T359 86-91 NN denotes cells
T358 74-85 JJ denotes endothelial
T357 71-73 IN denotes in
T356 62-70 VB denotes detected
T355 58-61 VB denotes was
T354 47-57 NN denotes expression
T353 38-46 NN denotes receptor
T352 34-37 NN denotes p75
T351 30-33 NN denotes TNF
T350 28-29 -COMMA- denotes ,
T349 20-28 NN denotes addition
T348 17-19 IN denotes In
R178 T349 T348 arg2Of addition,In
R179 T354 T351 arg1Of expression,TNF
R180 T354 T352 arg1Of expression,p75
R181 T354 T353 arg1Of expression,receptor
R182 T354 T355 arg1Of expression,was
R183 T354 T356 arg2Of expression,detected
R184 T356 T348 arg1Of detected,In
R185 T356 T350 arg1Of detected,","
R186 T356 T355 arg2Of detected,was
R187 T356 T357 arg1Of detected,in
R188 T359 T358 arg1Of cells,endothelial
R189 T359 T362 arg1Of cells,as
R190 T362 T357 arg2Of as,in
R191 T362 T360 arg1Of as,as
R192 T362 T361 arg1Of as,well
R193 T363 T362 arg2Of astrocytes,as
R194 T365 T364 arg2Of addition,In
R195 T369 T367 arg1Of phosphorylation,only
R196 T369 T368 arg1Of phosphorylation,p65-Thr435
R197 T369 T370 arg1Of phosphorylation,was

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T152 30-46 Protein denotes TNF p75 receptor
T153 133-136 Protein denotes p65

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T459 133-136 http://www.uniprot.org/uniprot/Q04206 denotes p65
T463 133-136 http://www.uniprot.org/uniprot/P21579 denotes p65
T470 30-33 http://www.uniprot.org/uniprot/P01375 denotes TNF

GO-BP

Id Subject Object Predicate Lexical cue
T170 144-159 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

GO-CC

Id Subject Object Predicate Lexical cue
T181 86-91 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T111 17-114 Sentence denotes In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes.
T11 17-114 Sentence denotes In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes.

simple1

Id Subject Object Predicate Lexical cue
T193 133-136 Protein denotes p65
T192 30-46 Protein denotes TNF p75 receptor

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T916 30-46 Protein denotes TNF p75 receptor
T917 133-136 Protein denotes p65
T926 47-57 Gene_expression denotes expression
T928 144-159 Phosphorylation denotes phosphorylation
R647 T916 T926 themeOf TNF p75 receptor,expression
R648 T917 T928 themeOf p65,phosphorylation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T768 47-57 Gene_expression denotes expression
T758 133-136 Protein denotes p65
T757 30-46 Protein denotes TNF p75 receptor
T769 144-159 Phosphorylation denotes phosphorylation
R556 T757 T768 themeOf TNF p75 receptor,expression
R557 T758 T769 themeOf p65,phosphorylation

DLUT931

Id Subject Object Predicate Lexical cue
T799 30-46 Protein denotes TNF p75 receptor
T800 133-136 Protein denotes p65
T811 47-57 Gene_expression denotes expression
T812 144-159 Phosphorylation denotes phosphorylation
R625 T799 T811 themeOf TNF p75 receptor,expression
R626 T800 T812 themeOf p65,phosphorylation

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T985 128-159 Phosphorylation denotes only p65-Thr435 phosphorylation
T983 30-57 Gene_expression denotes TNF p75 receptor expression
T978 74-113 Entity denotes endothelial cells as well as astrocytes
T964 30-46 Protein denotes TNF p75 receptor
T939 133-143 Entity denotes p65-Thr435
T943 133-143 Protein denotes p65-Thr435
T951 103-113 Entity denotes astrocytes
R600 T964 T983 themeOf TNF p75 receptor,TNF p75 receptor expression
R656 T939 T943 partOf p65-Thr435,p65-Thr435
R657 T939 T985 siteOf p65-Thr435,only p65-Thr435 phosphorylation
R658 T943 T985 themeOf p65-Thr435,only p65-Thr435 phosphorylation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T657 160-163 VBD denotes was
T656 144-159 NN denotes phosphorylation
T655 133-143 JJ denotes p65-Thr435
T654 128-132 RB denotes only
T653 126-127 , denotes ,
T652 118-126 NN denotes addition
T651 115-117 IN denotes In
T650 113-114 . denotes .
T649 103-113 NNS denotes astrocytes
T648 100-102 IN denotes as
T647 95-99 RB denotes well
T646 92-94 RB denotes as
T645 86-91 NNS denotes cells
T644 74-85 JJ denotes endothelial
T643 71-73 IN denotes in
T642 62-70 VBN denotes detected
T641 58-61 VBD denotes was
T640 47-57 NN denotes expression
T639 38-46 NN denotes receptor
T638 34-37 NN denotes p75
T637 30-33 NNP denotes TNF
T636 28-29 , denotes ,
T635 20-28 NN denotes addition
T634 17-19 IN denotes In
T633 15-16 . denotes .
R453 T647 T648 advmod well,as
R454 T648 T645 cc as,cells
R455 T649 T645 conj astrocytes,cells
R456 T650 T642 punct .,detected
R458 T652 T651 pobj addition,In
R440 T634 T642 prep In,detected
R441 T635 T634 pobj addition,In
R442 T636 T642 punct ",",detected
R443 T637 T640 compound TNF,expression
R444 T638 T640 compound p75,expression
R445 T639 T640 compound receptor,expression
R446 T640 T642 nsubjpass expression,detected
R447 T641 T642 auxpass was,detected
R448 T642 T642 ROOT detected,detected
R449 T643 T642 prep in,detected
R450 T644 T645 amod endothelial,cells
R451 T645 T643 pobj cells,in
R452 T646 T648 advmod as,as
R460 T654 T656 advmod only,phosphorylation
R461 T655 T656 amod p65-Thr435,phosphorylation

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T857 144-159 Phosphorylation denotes phosphorylation
T856 144-159 Phosphorylation denotes phosphorylation
T855 137-143 Protein denotes Thr435
T854 133-136 Protein denotes p65
T853 47-57 Gene_expression denotes expression
T852 30-46 Protein denotes TNF p75 receptor
R568 T852 T853 themeOf TNF p75 receptor,expression
R569 T854 T856 themeOf p65,phosphorylation
R570 T855 T857 themeOf Thr435,phosphorylation

testone

Id Subject Object Predicate Lexical cue
T24 30-46 Protein denotes TNF p75 receptor
T25 133-136 Protein denotes p65
T40 47-57 Gene_expression denotes expression
T41 144-159 Phosphorylation denotes phosphorylation
R4 T24 T40 themeOf TNF p75 receptor,expression
R5 T25 T41 themeOf p65,phosphorylation

test3

Id Subject Object Predicate Lexical cue
T79 144-159 Phosphorylation denotes phosphorylation
T78 133-136 Protein denotes p65
T77 47-57 Gene_expression denotes expression
T76 30-46 Protein denotes TNF p75 receptor
T56 30-46 Protein denotes TNF p75 receptor
T57 133-136 Protein denotes p65
R22 T76 T77 themeOf TNF p75 receptor,expression
R23 T78 T79 themeOf p65,phosphorylation