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PMC:3312845 / 975-1138 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T368 144-154 NN denotes p65-Thr435
T367 139-143 RB denotes only
T366 137-138 -COMMA- denotes ,
T365 129-137 NN denotes addition
T364 126-128 IN denotes In
T363 114-124 NN denotes astrocytes
T362 111-113 IN denotes as
T361 106-110 RB denotes well
T360 103-105 RB denotes as
T359 97-102 NN denotes cells
T358 85-96 JJ denotes endothelial
T357 82-84 IN denotes in
T356 73-81 VB denotes detected
T355 69-72 VB denotes was
T354 58-68 NN denotes expression
T353 49-57 NN denotes receptor
T352 45-48 NN denotes p75
T351 41-44 NN denotes TNF
T350 39-40 -COMMA- denotes ,
T349 31-39 NN denotes addition
T348 28-30 IN denotes In
T347 10-26 NN denotes immunoreactivity
T346 4-9 NN denotes TNF-α
R177 T347 T346 arg1Of immunoreactivity,TNF-α
R178 T349 T348 arg2Of addition,In
R179 T354 T351 arg1Of expression,TNF
R180 T354 T352 arg1Of expression,p75
R181 T354 T353 arg1Of expression,receptor
R182 T354 T355 arg1Of expression,was
R183 T354 T356 arg2Of expression,detected
R184 T356 T348 arg1Of detected,In
R185 T356 T350 arg1Of detected,","
R186 T356 T355 arg2Of detected,was
R187 T356 T357 arg1Of detected,in
R188 T359 T358 arg1Of cells,endothelial
R189 T359 T362 arg1Of cells,as
R190 T362 T357 arg2Of as,in
R191 T362 T360 arg1Of as,as
R192 T362 T361 arg1Of as,well
R193 T363 T362 arg2Of astrocytes,as
R194 T365 T364 arg2Of addition,In

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T151 4-9 Protein denotes TNF-α
T152 41-57 Protein denotes TNF p75 receptor
T153 144-147 Protein denotes p65

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T459 144-147 http://www.uniprot.org/uniprot/Q04206 denotes p65
T463 144-147 http://www.uniprot.org/uniprot/P21579 denotes p65
T469 4-7 http://www.uniprot.org/uniprot/P01375 denotes TNF
T470 41-44 http://www.uniprot.org/uniprot/P01375 denotes TNF
T475 4-9 http://www.uniprot.org/uniprot/P01375 denotes TNF-α

GO-CC

Id Subject Object Predicate Lexical cue
T181 97-102 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T111 28-125 Sentence denotes In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes.
T11 28-125 Sentence denotes In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes.

simple1

Id Subject Object Predicate Lexical cue
T193 144-147 Protein denotes p65
T192 41-57 Protein denotes TNF p75 receptor
T191 4-9 Protein denotes TNF-α

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T915 4-9 Protein denotes TNF-α
T916 41-57 Protein denotes TNF p75 receptor
T917 144-147 Protein denotes p65
T926 58-68 Gene_expression denotes expression
R647 T916 T926 themeOf TNF p75 receptor,expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T768 58-68 Gene_expression denotes expression
T758 144-147 Protein denotes p65
T757 41-57 Protein denotes TNF p75 receptor
T756 4-9 Protein denotes TNF-α
R556 T757 T768 themeOf TNF p75 receptor,expression

DLUT931

Id Subject Object Predicate Lexical cue
T798 4-9 Protein denotes TNF-α
T799 41-57 Protein denotes TNF p75 receptor
T800 144-147 Protein denotes p65
T811 58-68 Gene_expression denotes expression
R625 T799 T811 themeOf TNF p75 receptor,expression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T983 41-68 Gene_expression denotes TNF p75 receptor expression
T978 85-124 Entity denotes endothelial cells as well as astrocytes
T975 4-9 Protein denotes TNF-α
T964 41-57 Protein denotes TNF p75 receptor
T939 144-154 Entity denotes p65-Thr435
T943 144-154 Protein denotes p65-Thr435
T951 114-124 Entity denotes astrocytes
R600 T964 T983 themeOf TNF p75 receptor,TNF p75 receptor expression
R656 T939 T943 partOf p65-Thr435,p65-Thr435

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T655 144-154 JJ denotes p65-Thr435
T654 139-143 RB denotes only
T653 137-138 , denotes ,
T652 129-137 NN denotes addition
T651 126-128 IN denotes In
T650 124-125 . denotes .
T649 114-124 NNS denotes astrocytes
T648 111-113 IN denotes as
T647 106-110 RB denotes well
T646 103-105 RB denotes as
T645 97-102 NNS denotes cells
T644 85-96 JJ denotes endothelial
T643 82-84 IN denotes in
T642 73-81 VBN denotes detected
T641 69-72 VBD denotes was
T640 58-68 NN denotes expression
T639 49-57 NN denotes receptor
T638 45-48 NN denotes p75
T637 41-44 NNP denotes TNF
T636 39-40 , denotes ,
T635 31-39 NN denotes addition
T634 28-30 IN denotes In
T633 26-27 . denotes .
T632 10-26 NN denotes immunoreactivity
T631 4-9 JJ denotes TNF-α
R453 T647 T648 advmod well,as
R454 T648 T645 cc as,cells
R455 T649 T645 conj astrocytes,cells
R456 T650 T642 punct .,detected
R458 T652 T651 pobj addition,In
R437 T631 T632 amod TNF-α,immunoreactivity
R440 T634 T642 prep In,detected
R441 T635 T634 pobj addition,In
R442 T636 T642 punct ",",detected
R443 T637 T640 compound TNF,expression
R444 T638 T640 compound p75,expression
R445 T639 T640 compound receptor,expression
R446 T640 T642 nsubjpass expression,detected
R447 T641 T642 auxpass was,detected
R448 T642 T642 ROOT detected,detected
R449 T643 T642 prep in,detected
R450 T644 T645 amod endothelial,cells
R451 T645 T643 pobj cells,in
R452 T646 T648 advmod as,as

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T855 148-154 Protein denotes Thr435
T854 144-147 Protein denotes p65
T853 58-68 Gene_expression denotes expression
T852 41-57 Protein denotes TNF p75 receptor
T851 4-9 Protein denotes TNF-α
R568 T852 T853 themeOf TNF p75 receptor,expression

testone

Id Subject Object Predicate Lexical cue
T23 4-9 Protein denotes TNF-α
T24 41-57 Protein denotes TNF p75 receptor
T25 144-147 Protein denotes p65
T40 58-68 Gene_expression denotes expression
R4 T24 T40 themeOf TNF p75 receptor,expression

test3

Id Subject Object Predicate Lexical cue
T78 144-147 Protein denotes p65
T77 58-68 Gene_expression denotes expression
T76 41-57 Protein denotes TNF p75 receptor
T75 4-9 Protein denotes TNF-α
T55 4-9 Protein denotes TNF-α
T56 41-57 Protein denotes TNF p75 receptor
T57 144-147 Protein denotes p65
R22 T76 T77 themeOf TNF p75 receptor,expression