PMC:3312845 / 949-1210 JSONTXT

{"project":"pmc-enju-pas","denotations":[{"id":"T377","span":{"begin":247,"end":253},"obj":"NN"},{"id":"T376","span":{"begin":244,"end":246},"obj":"IN"},{"id":"T375","span":{"begin":232,"end":243},"obj":"VB"},{"id":"T374","span":{"begin":226,"end":231},"obj":"NN"},{"id":"T373","span":{"begin":214,"end":225},"obj":"JJ"},{"id":"T372","span":{"begin":211,"end":213},"obj":"IN"},{"id":"T371","span":{"begin":201,"end":210},"obj":"VB"},{"id":"T370","span":{"begin":197,"end":200},"obj":"VB"},{"id":"T369","span":{"begin":181,"end":196},"obj":"NN"},{"id":"T368","span":{"begin":170,"end":180},"obj":"NN"},{"id":"T367","span":{"begin":165,"end":169},"obj":"RB"},{"id":"T366","span":{"begin":163,"end":164},"obj":"-COMMA-"},{"id":"T365","span":{"begin":155,"end":163},"obj":"NN"},{"id":"T364","span":{"begin":152,"end":154},"obj":"IN"},{"id":"T363","span":{"begin":140,"end":150},"obj":"NN"},{"id":"T362","span":{"begin":137,"end":139},"obj":"IN"},{"id":"T361","span":{"begin":132,"end":136},"obj":"RB"},{"id":"T360","span":{"begin":129,"end":131},"obj":"RB"},{"id":"T359","span":{"begin":123,"end":128},"obj":"NN"},{"id":"T358","span":{"begin":111,"end":122},"obj":"JJ"},{"id":"T357","span":{"begin":108,"end":110},"obj":"IN"},{"id":"T356","span":{"begin":99,"end":107},"obj":"VB"},{"id":"T355","span":{"begin":95,"end":98},"obj":"VB"},{"id":"T354","span":{"begin":84,"end":94},"obj":"NN"},{"id":"T353","span":{"begin":75,"end":83},"obj":"NN"},{"id":"T352","span":{"begin":71,"end":74},"obj":"NN"},{"id":"T351","span":{"begin":67,"end":70},"obj":"NN"},{"id":"T350","span":{"begin":65,"end":66},"obj":"-COMMA-"},{"id":"T349","span":{"begin":57,"end":65},"obj":"NN"},{"id":"T348","span":{"begin":54,"end":56},"obj":"IN"},{"id":"T347","span":{"begin":36,"end":52},"obj":"NN"},{"id":"T346","span":{"begin":30,"end":35},"obj":"NN"},{"id":"T345","span":{"begin":23,"end":29},"obj":"JJ"},{"id":"T344","span":{"begin":16,"end":22},"obj":"VB"},{"id":"T343","span":{"begin":6,"end":15},"obj":"NN"}],"relations":[{"id":"R172","pred":"arg1Of","subj":"T343","obj":"T344"},{"id":"R175","pred":"arg2Of","subj":"T347","obj":"T344"},{"id":"R176","pred":"arg1Of","subj":"T347","obj":"T345"},{"id":"R177","pred":"arg1Of","subj":"T347","obj":"T346"},{"id":"R178","pred":"arg2Of","subj":"T349","obj":"T348"},{"id":"R179","pred":"arg1Of","subj":"T354","obj":"T351"},{"id":"R180","pred":"arg1Of","subj":"T354","obj":"T352"},{"id":"R181","pred":"arg1Of","subj":"T354","obj":"T353"},{"id":"R182","pred":"arg1Of","subj":"T354","obj":"T355"},{"id":"R183","pred":"arg2Of","subj":"T354","obj":"T356"},{"id":"R184","pred":"arg1Of","subj":"T356","obj":"T348"},{"id":"R185","pred":"arg1Of","subj":"T356","obj":"T350"},{"id":"R186","pred":"arg2Of","subj":"T356","obj":"T355"},{"id":"R187","pred":"arg1Of","subj":"T356","obj":"T357"},{"id":"R188","pred":"arg1Of","subj":"T359","obj":"T358"},{"id":"R189","pred":"arg1Of","subj":"T359","obj":"T362"},{"id":"R190","pred":"arg2Of","subj":"T362","obj":"T357"},{"id":"R191","pred":"arg1Of","subj":"T362","obj":"T360"},{"id":"R192","pred":"arg1Of","subj":"T362","obj":"T361"},{"id":"R193","pred":"arg2Of","subj":"T363","obj":"T362"},{"id":"R194","pred":"arg2Of","subj":"T365","obj":"T364"},{"id":"R195","pred":"arg1Of","subj":"T369","obj":"T367"},{"id":"R196","pred":"arg1Of","subj":"T369","obj":"T368"},{"id":"R197","pred":"arg1Of","subj":"T369","obj":"T370"},{"id":"R198","pred":"arg2Of","subj":"T369","obj":"T371"},{"id":"R199","pred":"arg1Of","subj":"T371","obj":"T364"},{"id":"R200","pred":"arg1Of","subj":"T371","obj":"T366"},{"id":"R201","pred":"arg2Of","subj":"T371","obj":"T370"},{"id":"R202","pred":"arg1Of","subj":"T371","obj":"T372"},{"id":"R203","pred":"arg2Of","subj":"T374","obj":"T372"},{"id":"R204","pred":"arg1Of","subj":"T374","obj":"T373"},{"id":"R205","pred":"arg2Of","subj":"T374","obj":"T375"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"vated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 express"}

{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T151","span":{"begin":30,"end":35},"obj":"Protein"},{"id":"T152","span":{"begin":67,"end":83},"obj":"Protein"},{"id":"T153","span":{"begin":170,"end":173},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"vated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 express"}

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T459","span":{"begin":170,"end":173},"obj":"http://www.uniprot.org/uniprot/Q04206"},{"id":"T463","span":{"begin":170,"end":173},"obj":"http://www.uniprot.org/uniprot/P21579"},{"id":"T469","span":{"begin":30,"end":33},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T470","span":{"begin":67,"end":70},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T475","span":{"begin":30,"end":35},"obj":"http://www.uniprot.org/uniprot/P01375"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"vated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 express"}

{"project":"GO-BP","denotations":[{"id":"T170","span":{"begin":181,"end":196},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"text":"vated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 express"}

{"project":"GO-CC","denotations":[{"id":"T181","span":{"begin":123,"end":128},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T182","span":{"begin":226,"end":231},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"vated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 express"}

{"project":"sentences","denotations":[{"id":"T111","span":{"begin":54,"end":151},"obj":"Sentence"},{"id":"T11","span":{"begin":54,"end":151},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"vated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 express"}

{"project":"simple1","denotations":[{"id":"T193","span":{"begin":170,"end":173},"obj":"Protein"},{"id":"T192","span":{"begin":67,"end":83},"obj":"Protein"},{"id":"T191","span":{"begin":30,"end":35},"obj":"Protein"}],"text":"vated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 express"}

{"project":"BioNLP16_DUT","denotations":[{"id":"T915","span":{"begin":30,"end":35},"obj":"Protein"},{"id":"T916","span":{"begin":67,"end":83},"obj":"Protein"},{"id":"T917","span":{"begin":170,"end":173},"obj":"Protein"},{"id":"T926","span":{"begin":84,"end":94},"obj":"Gene_expression"},{"id":"T927","span":{"begin":201,"end":210},"obj":"Positive_regulation"},{"id":"T928","span":{"begin":181,"end":196},"obj":"Phosphorylation"}],"relations":[{"id":"R647","pred":"themeOf","subj":"T916","obj":"T926"},{"id":"R648","pred":"themeOf","subj":"T917","obj":"T928"},{"id":"R651","pred":"themeOf","subj":"T928","obj":"T927"}],"text":"vated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 express"}

{"project":"BioNLP16_Messiy","denotations":[{"id":"T768","span":{"begin":84,"end":94},"obj":"Gene_expression"},{"id":"T758","span":{"begin":170,"end":173},"obj":"Protein"},{"id":"T757","span":{"begin":67,"end":83},"obj":"Protein"},{"id":"T756","span":{"begin":30,"end":35},"obj":"Protein"},{"id":"T770","span":{"begin":201,"end":210},"obj":"Positive_regulation"},{"id":"T769","span":{"begin":181,"end":196},"obj":"Phosphorylation"}],"relations":[{"id":"R556","pred":"themeOf","subj":"T757","obj":"T768"},{"id":"R557","pred":"themeOf","subj":"T758","obj":"T769"},{"id":"R564","pred":"themeOf","subj":"T769","obj":"T770"}],"text":"vated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 express"}

{"project":"DLUT931","denotations":[{"id":"T798","span":{"begin":30,"end":35},"obj":"Protein"},{"id":"T799","span":{"begin":67,"end":83},"obj":"Protein"},{"id":"T800","span":{"begin":170,"end":173},"obj":"Protein"},{"id":"T811","span":{"begin":84,"end":94},"obj":"Gene_expression"},{"id":"T812","span":{"begin":181,"end":196},"obj":"Phosphorylation"},{"id":"T813","span":{"begin":201,"end":210},"obj":"Positive_regulation"}],"relations":[{"id":"R625","pred":"themeOf","subj":"T799","obj":"T811"},{"id":"R626","pred":"themeOf","subj":"T800","obj":"T812"},{"id":"R634","pred":"themeOf","subj":"T812","obj":"T813"}],"text":"vated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 express"}

{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T986","span":{"begin":165,"end":210},"obj":"Positive_regulation"},{"id":"T985","span":{"begin":165,"end":196},"obj":"Phosphorylation"},{"id":"T983","span":{"begin":67,"end":94},"obj":"Gene_expression"},{"id":"T978","span":{"begin":111,"end":150},"obj":"Entity"},{"id":"T975","span":{"begin":30,"end":35},"obj":"Protein"},{"id":"T964","span":{"begin":67,"end":83},"obj":"Protein"},{"id":"T939","span":{"begin":170,"end":180},"obj":"Entity"},{"id":"T943","span":{"begin":170,"end":180},"obj":"Protein"},{"id":"T951","span":{"begin":140,"end":150},"obj":"Entity"}],"relations":[{"id":"R600","pred":"themeOf","subj":"T964","obj":"T983"},{"id":"R605","pred":"themeOf","subj":"T985","obj":"T986"},{"id":"R656","pred":"partOf","subj":"T939","obj":"T943"},{"id":"R657","pred":"siteOf","subj":"T939","obj":"T985"},{"id":"R658","pred":"themeOf","subj":"T943","obj":"T985"}],"text":"vated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 express"}

{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T664","span":{"begin":247,"end":253},"obj":"NNP"},{"id":"T663","span":{"begin":244,"end":246},"obj":"IN"},{"id":"T662","span":{"begin":232,"end":243},"obj":"VBN"},{"id":"T661","span":{"begin":226,"end":231},"obj":"NNS"},{"id":"T660","span":{"begin":214,"end":225},"obj":"JJ"},{"id":"T659","span":{"begin":211,"end":213},"obj":"IN"},{"id":"T658","span":{"begin":201,"end":210},"obj":"VBN"},{"id":"T657","span":{"begin":197,"end":200},"obj":"VBD"},{"id":"T656","span":{"begin":181,"end":196},"obj":"NN"},{"id":"T655","span":{"begin":170,"end":180},"obj":"JJ"},{"id":"T654","span":{"begin":165,"end":169},"obj":"RB"},{"id":"T653","span":{"begin":163,"end":164},"obj":","},{"id":"T652","span":{"begin":155,"end":163},"obj":"NN"},{"id":"T651","span":{"begin":152,"end":154},"obj":"IN"},{"id":"T650","span":{"begin":150,"end":151},"obj":"."},{"id":"T649","span":{"begin":140,"end":150},"obj":"NNS"},{"id":"T648","span":{"begin":137,"end":139},"obj":"IN"},{"id":"T647","span":{"begin":132,"end":136},"obj":"RB"},{"id":"T646","span":{"begin":129,"end":131},"obj":"RB"},{"id":"T645","span":{"begin":123,"end":128},"obj":"NNS"},{"id":"T644","span":{"begin":111,"end":122},"obj":"JJ"},{"id":"T643","span":{"begin":108,"end":110},"obj":"IN"},{"id":"T642","span":{"begin":99,"end":107},"obj":"VBN"},{"id":"T641","span":{"begin":95,"end":98},"obj":"VBD"},{"id":"T640","span":{"begin":84,"end":94},"obj":"NN"},{"id":"T639","span":{"begin":75,"end":83},"obj":"NN"},{"id":"T638","span":{"begin":71,"end":74},"obj":"NN"},{"id":"T637","span":{"begin":67,"end":70},"obj":"NNP"},{"id":"T636","span":{"begin":65,"end":66},"obj":","},{"id":"T635","span":{"begin":57,"end":65},"obj":"NN"},{"id":"T634","span":{"begin":54,"end":56},"obj":"IN"},{"id":"T633","span":{"begin":52,"end":53},"obj":"."},{"id":"T632","span":{"begin":36,"end":52},"obj":"NN"},{"id":"T631","span":{"begin":30,"end":35},"obj":"JJ"},{"id":"T630","span":{"begin":23,"end":29},"obj":"JJ"},{"id":"T629","span":{"begin":16,"end":22},"obj":"VBD"},{"id":"T628","span":{"begin":6,"end":15},"obj":"NN"}],"relations":[{"id":"R453","pred":"advmod","subj":"T647","obj":"T648"},{"id":"R454","pred":"cc","subj":"T648","obj":"T645"},{"id":"R455","pred":"conj","subj":"T649","obj":"T645"},{"id":"R456","pred":"punct","subj":"T650","obj":"T642"},{"id":"R457","pred":"prep","subj":"T651","obj":"T658"},{"id":"R458","pred":"pobj","subj":"T652","obj":"T651"},{"id":"R459","pred":"punct","subj":"T653","obj":"T658"},{"id":"R434","pred":"nsubj","subj":"T628","obj":"T629"},{"id":"R435","pred":"ROOT","subj":"T629","obj":"T629"},{"id":"R436","pred":"amod","subj":"T630","obj":"T632"},{"id":"R437","pred":"amod","subj":"T631","obj":"T632"},{"id":"R438","pred":"dobj","subj":"T632","obj":"T629"},{"id":"R439","pred":"punct","subj":"T633","obj":"T629"},{"id":"R440","pred":"prep","subj":"T634","obj":"T642"},{"id":"R441","pred":"pobj","subj":"T635","obj":"T634"},{"id":"R442","pred":"punct","subj":"T636","obj":"T642"},{"id":"R443","pred":"compound","subj":"T637","obj":"T640"},{"id":"R444","pred":"compound","subj":"T638","obj":"T640"},{"id":"R445","pred":"compound","subj":"T639","obj":"T640"},{"id":"R446","pred":"nsubjpass","subj":"T640","obj":"T642"},{"id":"R447","pred":"auxpass","subj":"T641","obj":"T642"},{"id":"R448","pred":"ROOT","subj":"T642","obj":"T642"},{"id":"R449","pred":"prep","subj":"T643","obj":"T642"},{"id":"R450","pred":"amod","subj":"T644","obj":"T645"},{"id":"R451","pred":"pobj","subj":"T645","obj":"T643"},{"id":"R452","pred":"advmod","subj":"T646","obj":"T648"},{"id":"R460","pred":"advmod","subj":"T654","obj":"T656"},{"id":"R461","pred":"amod","subj":"T655","obj":"T656"},{"id":"R462","pred":"nsubjpass","subj":"T656","obj":"T658"},{"id":"R463","pred":"auxpass","subj":"T657","obj":"T658"},{"id":"R464","pred":"ROOT","subj":"T658","obj":"T658"},{"id":"R465","pred":"prep","subj":"T659","obj":"T658"},{"id":"R466","pred":"amod","subj":"T660","obj":"T661"},{"id":"R467","pred":"pobj","subj":"T661","obj":"T659"},{"id":"R468","pred":"acl","subj":"T662","obj":"T661"},{"id":"R469","pred":"agent","subj":"T663","obj":"T662"}],"text":"vated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 express"}

{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T859","span":{"begin":201,"end":210},"obj":"Positive_regulation"},{"id":"T858","span":{"begin":201,"end":210},"obj":"Positive_regulation"},{"id":"T857","span":{"begin":181,"end":196},"obj":"Phosphorylation"},{"id":"T856","span":{"begin":181,"end":196},"obj":"Phosphorylation"},{"id":"T855","span":{"begin":174,"end":180},"obj":"Protein"},{"id":"T854","span":{"begin":170,"end":173},"obj":"Protein"},{"id":"T853","span":{"begin":84,"end":94},"obj":"Gene_expression"},{"id":"T852","span":{"begin":67,"end":83},"obj":"Protein"},{"id":"T851","span":{"begin":30,"end":35},"obj":"Protein"}],"relations":[{"id":"R568","pred":"themeOf","subj":"T852","obj":"T853"},{"id":"R569","pred":"themeOf","subj":"T854","obj":"T856"},{"id":"R570","pred":"themeOf","subj":"T855","obj":"T857"},{"id":"R571","pred":"themeOf","subj":"T856","obj":"T858"},{"id":"R572","pred":"themeOf","subj":"T857","obj":"T859"}],"text":"vated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 express"}

{"project":"testone","denotations":[{"id":"T23","span":{"begin":30,"end":35},"obj":"Protein"},{"id":"T24","span":{"begin":67,"end":83},"obj":"Protein"},{"id":"T25","span":{"begin":170,"end":173},"obj":"Protein"},{"id":"T40","span":{"begin":84,"end":94},"obj":"Gene_expression"},{"id":"T41","span":{"begin":181,"end":196},"obj":"Phosphorylation"},{"id":"T42","span":{"begin":201,"end":210},"obj":"Positive_regulation"}],"relations":[{"id":"R4","pred":"themeOf","subj":"T24","obj":"T40"},{"id":"R5","pred":"themeOf","subj":"T25","obj":"T41"},{"id":"R12","pred":"themeOf","subj":"T41","obj":"T42"}],"text":"vated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 express"}

{"project":"test3","denotations":[{"id":"T80","span":{"begin":201,"end":210},"obj":"Positive_regulation"},{"id":"T79","span":{"begin":181,"end":196},"obj":"Phosphorylation"},{"id":"T78","span":{"begin":170,"end":173},"obj":"Protein"},{"id":"T77","span":{"begin":84,"end":94},"obj":"Gene_expression"},{"id":"T76","span":{"begin":67,"end":83},"obj":"Protein"},{"id":"T75","span":{"begin":30,"end":35},"obj":"Protein"},{"id":"T55","span":{"begin":30,"end":35},"obj":"Protein"},{"id":"T56","span":{"begin":67,"end":83},"obj":"Protein"},{"id":"T57","span":{"begin":170,"end":173},"obj":"Protein"}],"relations":[{"id":"R22","pred":"themeOf","subj":"T76","obj":"T77"},{"id":"R23","pred":"themeOf","subj":"T78","obj":"T79"},{"id":"R24","pred":"themeOf","subj":"T79","obj":"T80"}],"text":"vated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was increased in endothelial cells accompanied by SMI-71 express"}