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PMC:3312845 / 943-1137 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T368 176-186 NN denotes p65-Thr435
T367 171-175 RB denotes only
T366 169-170 -COMMA- denotes ,
T365 161-169 NN denotes addition
T364 158-160 IN denotes In
T363 146-156 NN denotes astrocytes
T362 143-145 IN denotes as
T361 138-142 RB denotes well
T360 135-137 RB denotes as
T359 129-134 NN denotes cells
T358 117-128 JJ denotes endothelial
T357 114-116 IN denotes in
T356 105-113 VB denotes detected
T355 101-104 VB denotes was
T354 90-100 NN denotes expression
T353 81-89 NN denotes receptor
T352 77-80 NN denotes p75
T351 73-76 NN denotes TNF
T350 71-72 -COMMA- denotes ,
T349 63-71 NN denotes addition
T348 60-62 IN denotes In
T347 42-58 NN denotes immunoreactivity
T346 36-41 NN denotes TNF-α
T345 29-35 JJ denotes strong
T344 22-28 VB denotes showed
T343 12-21 NN denotes microglia
T342 2-11 VB denotes activated
R171 T343 T342 arg2Of microglia,activated
R172 T343 T344 arg1Of microglia,showed
R175 T347 T344 arg2Of immunoreactivity,showed
R176 T347 T345 arg1Of immunoreactivity,strong
R177 T347 T346 arg1Of immunoreactivity,TNF-α
R178 T349 T348 arg2Of addition,In
R179 T354 T351 arg1Of expression,TNF
R180 T354 T352 arg1Of expression,p75
R181 T354 T353 arg1Of expression,receptor
R182 T354 T355 arg1Of expression,was
R183 T354 T356 arg2Of expression,detected
R184 T356 T348 arg1Of detected,In
R185 T356 T350 arg1Of detected,","
R186 T356 T355 arg2Of detected,was
R187 T356 T357 arg1Of detected,in
R188 T359 T358 arg1Of cells,endothelial
R189 T359 T362 arg1Of cells,as
R190 T362 T357 arg2Of as,in
R191 T362 T360 arg1Of as,as
R192 T362 T361 arg1Of as,well
R193 T363 T362 arg2Of astrocytes,as
R194 T365 T364 arg2Of addition,In

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T151 36-41 Protein denotes TNF-α
T152 73-89 Protein denotes TNF p75 receptor
T153 176-179 Protein denotes p65

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T459 176-179 http://www.uniprot.org/uniprot/Q04206 denotes p65
T463 176-179 http://www.uniprot.org/uniprot/P21579 denotes p65
T469 36-39 http://www.uniprot.org/uniprot/P01375 denotes TNF
T470 73-76 http://www.uniprot.org/uniprot/P01375 denotes TNF
T475 36-41 http://www.uniprot.org/uniprot/P01375 denotes TNF-α

GO-CC

Id Subject Object Predicate Lexical cue
T181 129-134 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T111 60-157 Sentence denotes In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes.
T11 60-157 Sentence denotes In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes.

simple1

Id Subject Object Predicate Lexical cue
T193 176-179 Protein denotes p65
T192 73-89 Protein denotes TNF p75 receptor
T191 36-41 Protein denotes TNF-α

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T915 36-41 Protein denotes TNF-α
T916 73-89 Protein denotes TNF p75 receptor
T917 176-179 Protein denotes p65
T926 90-100 Gene_expression denotes expression
R647 T916 T926 themeOf TNF p75 receptor,expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T768 90-100 Gene_expression denotes expression
T758 176-179 Protein denotes p65
T757 73-89 Protein denotes TNF p75 receptor
T756 36-41 Protein denotes TNF-α
R556 T757 T768 themeOf TNF p75 receptor,expression

DLUT931

Id Subject Object Predicate Lexical cue
T798 36-41 Protein denotes TNF-α
T799 73-89 Protein denotes TNF p75 receptor
T800 176-179 Protein denotes p65
T811 90-100 Gene_expression denotes expression
R625 T799 T811 themeOf TNF p75 receptor,expression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T983 73-100 Gene_expression denotes TNF p75 receptor expression
T978 117-156 Entity denotes endothelial cells as well as astrocytes
T975 36-41 Protein denotes TNF-α
T964 73-89 Protein denotes TNF p75 receptor
T939 176-186 Entity denotes p65-Thr435
T943 176-186 Protein denotes p65-Thr435
T951 146-156 Entity denotes astrocytes
R600 T964 T983 themeOf TNF p75 receptor,TNF p75 receptor expression
R656 T939 T943 partOf p65-Thr435,p65-Thr435

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T655 176-186 JJ denotes p65-Thr435
T654 171-175 RB denotes only
T653 169-170 , denotes ,
T652 161-169 NN denotes addition
T651 158-160 IN denotes In
T650 156-157 . denotes .
T649 146-156 NNS denotes astrocytes
T648 143-145 IN denotes as
T647 138-142 RB denotes well
T646 135-137 RB denotes as
T645 129-134 NNS denotes cells
T644 117-128 JJ denotes endothelial
T643 114-116 IN denotes in
T642 105-113 VBN denotes detected
T641 101-104 VBD denotes was
T640 90-100 NN denotes expression
T639 81-89 NN denotes receptor
T638 77-80 NN denotes p75
T637 73-76 NNP denotes TNF
T636 71-72 , denotes ,
T635 63-71 NN denotes addition
T634 60-62 IN denotes In
T633 58-59 . denotes .
T632 42-58 NN denotes immunoreactivity
T631 36-41 JJ denotes TNF-α
T630 29-35 JJ denotes strong
T629 22-28 VBD denotes showed
T628 12-21 NN denotes microglia
T627 2-11 VBN denotes activated
R453 T647 T648 advmod well,as
R454 T648 T645 cc as,cells
R455 T649 T645 conj astrocytes,cells
R456 T650 T642 punct .,detected
R458 T652 T651 pobj addition,In
R433 T627 T628 amod activated,microglia
R434 T628 T629 nsubj microglia,showed
R435 T629 T629 ROOT showed,showed
R436 T630 T632 amod strong,immunoreactivity
R437 T631 T632 amod TNF-α,immunoreactivity
R438 T632 T629 dobj immunoreactivity,showed
R439 T633 T629 punct .,showed
R440 T634 T642 prep In,detected
R441 T635 T634 pobj addition,In
R442 T636 T642 punct ",",detected
R443 T637 T640 compound TNF,expression
R444 T638 T640 compound p75,expression
R445 T639 T640 compound receptor,expression
R446 T640 T642 nsubjpass expression,detected
R447 T641 T642 auxpass was,detected
R448 T642 T642 ROOT detected,detected
R449 T643 T642 prep in,detected
R450 T644 T645 amod endothelial,cells
R451 T645 T643 pobj cells,in
R452 T646 T648 advmod as,as

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T855 180-186 Protein denotes Thr435
T854 176-179 Protein denotes p65
T853 90-100 Gene_expression denotes expression
T852 73-89 Protein denotes TNF p75 receptor
T851 36-41 Protein denotes TNF-α
R568 T852 T853 themeOf TNF p75 receptor,expression

testone

Id Subject Object Predicate Lexical cue
T23 36-41 Protein denotes TNF-α
T24 73-89 Protein denotes TNF p75 receptor
T25 176-179 Protein denotes p65
T40 90-100 Gene_expression denotes expression
R4 T24 T40 themeOf TNF p75 receptor,expression

test3

Id Subject Object Predicate Lexical cue
T78 176-179 Protein denotes p65
T77 90-100 Gene_expression denotes expression
T76 73-89 Protein denotes TNF p75 receptor
T75 36-41 Protein denotes TNF-α
T55 36-41 Protein denotes TNF-α
T56 73-89 Protein denotes TNF p75 receptor
T57 176-179 Protein denotes p65
R22 T76 T77 themeOf TNF p75 receptor,expression