PMC:3312845 / 895-1153 JSONTXT

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{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T151","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T152","span":{"begin":121,"end":137},"obj":"Protein"},{"id":"T153","span":{"begin":224,"end":227},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"α and NF-κB subunits.\n\nResults\nFollowing SE, most activated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was inc"}

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T459","span":{"begin":224,"end":227},"obj":"http://www.uniprot.org/uniprot/Q04206"},{"id":"T463","span":{"begin":224,"end":227},"obj":"http://www.uniprot.org/uniprot/P21579"},{"id":"T469","span":{"begin":84,"end":87},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T470","span":{"begin":121,"end":124},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T475","span":{"begin":84,"end":89},"obj":"http://www.uniprot.org/uniprot/P01375"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"α and NF-κB subunits.\n\nResults\nFollowing SE, most activated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was inc"}

{"project":"GO-BP","denotations":[{"id":"T170","span":{"begin":235,"end":250},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"text":"α and NF-κB subunits.\n\nResults\nFollowing SE, most activated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was inc"}

{"project":"GO-CC","denotations":[{"id":"T181","span":{"begin":177,"end":182},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"α and NF-κB subunits.\n\nResults\nFollowing SE, most activated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was inc"}

{"project":"sentences","denotations":[{"id":"T111","span":{"begin":108,"end":205},"obj":"Sentence"},{"id":"T110","span":{"begin":31,"end":107},"obj":"Sentence"},{"id":"T109","span":{"begin":23,"end":30},"obj":"Sentence"},{"id":"T9","span":{"begin":23,"end":30},"obj":"Sentence"},{"id":"T10","span":{"begin":31,"end":107},"obj":"Sentence"},{"id":"T11","span":{"begin":108,"end":205},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"α and NF-κB subunits.\n\nResults\nFollowing SE, most activated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was inc"}

{"project":"simple1","denotations":[{"id":"T193","span":{"begin":224,"end":227},"obj":"Protein"},{"id":"T192","span":{"begin":121,"end":137},"obj":"Protein"},{"id":"T191","span":{"begin":84,"end":89},"obj":"Protein"}],"text":"α and NF-κB subunits.\n\nResults\nFollowing SE, most activated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was inc"}

{"project":"BioNLP16_DUT","denotations":[{"id":"T915","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T916","span":{"begin":121,"end":137},"obj":"Protein"},{"id":"T917","span":{"begin":224,"end":227},"obj":"Protein"},{"id":"T926","span":{"begin":138,"end":148},"obj":"Gene_expression"},{"id":"T928","span":{"begin":235,"end":250},"obj":"Phosphorylation"}],"relations":[{"id":"R647","pred":"themeOf","subj":"T916","obj":"T926"},{"id":"R648","pred":"themeOf","subj":"T917","obj":"T928"}],"text":"α and NF-κB subunits.\n\nResults\nFollowing SE, most activated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was inc"}

{"project":"BioNLP16_Messiy","denotations":[{"id":"T768","span":{"begin":138,"end":148},"obj":"Gene_expression"},{"id":"T758","span":{"begin":224,"end":227},"obj":"Protein"},{"id":"T757","span":{"begin":121,"end":137},"obj":"Protein"},{"id":"T756","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T769","span":{"begin":235,"end":250},"obj":"Phosphorylation"}],"relations":[{"id":"R556","pred":"themeOf","subj":"T757","obj":"T768"},{"id":"R557","pred":"themeOf","subj":"T758","obj":"T769"}],"text":"α and NF-κB subunits.\n\nResults\nFollowing SE, most activated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was inc"}

{"project":"DLUT931","denotations":[{"id":"T798","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T799","span":{"begin":121,"end":137},"obj":"Protein"},{"id":"T800","span":{"begin":224,"end":227},"obj":"Protein"},{"id":"T811","span":{"begin":138,"end":148},"obj":"Gene_expression"},{"id":"T812","span":{"begin":235,"end":250},"obj":"Phosphorylation"}],"relations":[{"id":"R625","pred":"themeOf","subj":"T799","obj":"T811"},{"id":"R626","pred":"themeOf","subj":"T800","obj":"T812"}],"text":"α and NF-κB subunits.\n\nResults\nFollowing SE, most activated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was inc"}

{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T985","span":{"begin":219,"end":250},"obj":"Phosphorylation"},{"id":"T983","span":{"begin":121,"end":148},"obj":"Gene_expression"},{"id":"T978","span":{"begin":165,"end":204},"obj":"Entity"},{"id":"T975","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T968","span":{"begin":45,"end":69},"obj":"Entity"},{"id":"T964","span":{"begin":121,"end":137},"obj":"Protein"},{"id":"T939","span":{"begin":224,"end":234},"obj":"Entity"},{"id":"T943","span":{"begin":224,"end":234},"obj":"Protein"},{"id":"T951","span":{"begin":194,"end":204},"obj":"Entity"},{"id":"T957","span":{"begin":6,"end":11},"obj":"Protein"},{"id":"T961","span":{"begin":41,"end":44},"obj":"Protein"}],"relations":[{"id":"R600","pred":"themeOf","subj":"T964","obj":"T983"},{"id":"R656","pred":"partOf","subj":"T939","obj":"T943"},{"id":"R657","pred":"siteOf","subj":"T939","obj":"T985"},{"id":"R658","pred":"themeOf","subj":"T943","obj":"T985"}],"text":"α and NF-κB subunits.\n\nResults\nFollowing SE, most activated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was inc"}

{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T657","span":{"begin":251,"end":254},"obj":"VBD"},{"id":"T656","span":{"begin":235,"end":250},"obj":"NN"},{"id":"T655","span":{"begin":224,"end":234},"obj":"JJ"},{"id":"T654","span":{"begin":219,"end":223},"obj":"RB"},{"id":"T653","span":{"begin":217,"end":218},"obj":","},{"id":"T652","span":{"begin":209,"end":217},"obj":"NN"},{"id":"T651","span":{"begin":206,"end":208},"obj":"IN"},{"id":"T650","span":{"begin":204,"end":205},"obj":"."},{"id":"T649","span":{"begin":194,"end":204},"obj":"NNS"},{"id":"T648","span":{"begin":191,"end":193},"obj":"IN"},{"id":"T647","span":{"begin":186,"end":190},"obj":"RB"},{"id":"T646","span":{"begin":183,"end":185},"obj":"RB"},{"id":"T645","span":{"begin":177,"end":182},"obj":"NNS"},{"id":"T644","span":{"begin":165,"end":176},"obj":"JJ"},{"id":"T643","span":{"begin":162,"end":164},"obj":"IN"},{"id":"T642","span":{"begin":153,"end":161},"obj":"VBN"},{"id":"T641","span":{"begin":149,"end":152},"obj":"VBD"},{"id":"T640","span":{"begin":138,"end":148},"obj":"NN"},{"id":"T639","span":{"begin":129,"end":137},"obj":"NN"},{"id":"T638","span":{"begin":125,"end":128},"obj":"NN"},{"id":"T637","span":{"begin":121,"end":124},"obj":"NNP"},{"id":"T636","span":{"begin":119,"end":120},"obj":","},{"id":"T635","span":{"begin":111,"end":119},"obj":"NN"},{"id":"T634","span":{"begin":108,"end":110},"obj":"IN"},{"id":"T633","span":{"begin":106,"end":107},"obj":"."},{"id":"T632","span":{"begin":90,"end":106},"obj":"NN"},{"id":"T631","span":{"begin":84,"end":89},"obj":"JJ"},{"id":"T630","span":{"begin":77,"end":83},"obj":"JJ"},{"id":"T629","span":{"begin":70,"end":76},"obj":"VBD"},{"id":"T628","span":{"begin":60,"end":69},"obj":"NN"},{"id":"T627","span":{"begin":50,"end":59},"obj":"VBN"},{"id":"T626","span":{"begin":45,"end":49},"obj":"JJS"},{"id":"T625","span":{"begin":43,"end":44},"obj":","},{"id":"T624","span":{"begin":41,"end":43},"obj":"NNP"},{"id":"T623","span":{"begin":31,"end":40},"obj":"VBG"},{"id":"T622","span":{"begin":23,"end":30},"obj":"NNS"},{"id":"T621","span":{"begin":20,"end":21},"obj":"."},{"id":"T620","span":{"begin":12,"end":20},"obj":"NNS"},{"id":"T619","span":{"begin":6,"end":11},"obj":"NNP"},{"id":"T618","span":{"begin":2,"end":5},"obj":"CC"}],"relations":[{"id":"R453","pred":"advmod","subj":"T647","obj":"T648"},{"id":"R454","pred":"cc","subj":"T648","obj":"T645"},{"id":"R455","pred":"conj","subj":"T649","obj":"T645"},{"id":"R456","pred":"punct","subj":"T650","obj":"T642"},{"id":"R458","pred":"pobj","subj":"T652","obj":"T651"},{"id":"R428","pred":"ROOT","subj":"T622","obj":"T622"},{"id":"R429","pred":"prep","subj":"T623","obj":"T629"},{"id":"R430","pred":"pobj","subj":"T624","obj":"T623"},{"id":"R431","pred":"punct","subj":"T625","obj":"T629"},{"id":"R432","pred":"advmod","subj":"T626","obj":"T627"},{"id":"R433","pred":"amod","subj":"T627","obj":"T628"},{"id":"R434","pred":"nsubj","subj":"T628","obj":"T629"},{"id":"R435","pred":"ROOT","subj":"T629","obj":"T629"},{"id":"R436","pred":"amod","subj":"T630","obj":"T632"},{"id":"R437","pred":"amod","subj":"T631","obj":"T632"},{"id":"R438","pred":"dobj","subj":"T632","obj":"T629"},{"id":"R439","pred":"punct","subj":"T633","obj":"T629"},{"id":"R440","pred":"prep","subj":"T634","obj":"T642"},{"id":"R441","pred":"pobj","subj":"T635","obj":"T634"},{"id":"R442","pred":"punct","subj":"T636","obj":"T642"},{"id":"R443","pred":"compound","subj":"T637","obj":"T640"},{"id":"R444","pred":"compound","subj":"T638","obj":"T640"},{"id":"R445","pred":"compound","subj":"T639","obj":"T640"},{"id":"R446","pred":"nsubjpass","subj":"T640","obj":"T642"},{"id":"R447","pred":"auxpass","subj":"T641","obj":"T642"},{"id":"R448","pred":"ROOT","subj":"T642","obj":"T642"},{"id":"R449","pred":"prep","subj":"T643","obj":"T642"},{"id":"R450","pred":"amod","subj":"T644","obj":"T645"},{"id":"R451","pred":"pobj","subj":"T645","obj":"T643"},{"id":"R452","pred":"advmod","subj":"T646","obj":"T648"},{"id":"R460","pred":"advmod","subj":"T654","obj":"T656"},{"id":"R461","pred":"amod","subj":"T655","obj":"T656"}],"text":"α and NF-κB subunits.\n\nResults\nFollowing SE, most activated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was inc"}

{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T857","span":{"begin":235,"end":250},"obj":"Phosphorylation"},{"id":"T856","span":{"begin":235,"end":250},"obj":"Phosphorylation"},{"id":"T855","span":{"begin":228,"end":234},"obj":"Protein"},{"id":"T854","span":{"begin":224,"end":227},"obj":"Protein"},{"id":"T853","span":{"begin":138,"end":148},"obj":"Gene_expression"},{"id":"T852","span":{"begin":121,"end":137},"obj":"Protein"},{"id":"T851","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T850","span":{"begin":6,"end":20},"obj":"Protein"}],"relations":[{"id":"R568","pred":"themeOf","subj":"T852","obj":"T853"},{"id":"R569","pred":"themeOf","subj":"T854","obj":"T856"},{"id":"R570","pred":"themeOf","subj":"T855","obj":"T857"}],"text":"α and NF-κB subunits.\n\nResults\nFollowing SE, most activated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was inc"}

{"project":"testone","denotations":[{"id":"T23","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T24","span":{"begin":121,"end":137},"obj":"Protein"},{"id":"T25","span":{"begin":224,"end":227},"obj":"Protein"},{"id":"T40","span":{"begin":138,"end":148},"obj":"Gene_expression"},{"id":"T41","span":{"begin":235,"end":250},"obj":"Phosphorylation"}],"relations":[{"id":"R4","pred":"themeOf","subj":"T24","obj":"T40"},{"id":"R5","pred":"themeOf","subj":"T25","obj":"T41"}],"text":"α and NF-κB subunits.\n\nResults\nFollowing SE, most activated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was inc"}

{"project":"test3","denotations":[{"id":"T79","span":{"begin":235,"end":250},"obj":"Phosphorylation"},{"id":"T78","span":{"begin":224,"end":227},"obj":"Protein"},{"id":"T77","span":{"begin":138,"end":148},"obj":"Gene_expression"},{"id":"T76","span":{"begin":121,"end":137},"obj":"Protein"},{"id":"T75","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T55","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T56","span":{"begin":121,"end":137},"obj":"Protein"},{"id":"T57","span":{"begin":224,"end":227},"obj":"Protein"}],"relations":[{"id":"R22","pred":"themeOf","subj":"T76","obj":"T77"},{"id":"R23","pred":"themeOf","subj":"T78","obj":"T79"}],"text":"α and NF-κB subunits.\n\nResults\nFollowing SE, most activated microglia showed strong TNF-α immunoreactivity. In addition, TNF p75 receptor expression was detected in endothelial cells as well as astrocytes. In addition, only p65-Thr435 phosphorylation was inc"}