PMC:3312845 / 686-941
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T340 | 252-253 | -COMMA- | denotes | , |
| T339 | 250-252 | NN | denotes | SE |
| T338 | 240-249 | VB | denotes | Following |
| T337 | 232-239 | NN | denotes | Results |
| T336 | 221-229 | NN | denotes | subunits |
| T335 | 215-220 | NN | denotes | NF-κB |
| T334 | 211-214 | CC | denotes | and |
| T333 | 205-210 | NN | denotes | TNF-α |
| T332 | 201-204 | IN | denotes | for |
| T331 | 193-200 | NN | denotes | studies |
| T330 | 173-192 | JJ | denotes | immunohistochemical |
| T329 | 169-172 | CC | denotes | and |
| T328 | 160-168 | NN | denotes | staining |
| T327 | 158-159 | NN | denotes | B |
| T326 | 146-157 | JJ | denotes | Fluoro-Jade |
| T325 | 136-145 | VB | denotes | performed |
| T324 | 133-135 | PRP | denotes | we |
| T323 | 131-132 | -COMMA- | denotes | , |
| T322 | 121-131 | RB | denotes | Thereafter |
| T321 | 110-119 | NN | denotes | induction |
| T320 | 107-109 | NN | denotes | SE |
| T319 | 104-106 | TO | denotes | to |
| T318 | 98-103 | JJ | denotes | prior |
| T317 | 96-97 | -RRB- | denotes | ) |
| T316 | 88-96 | NN | denotes | sTNFp55R |
| T315 | 87-88 | -LRB- | denotes | ( |
| T314 | 78-86 | NN | denotes | receptor |
| T313 | 74-77 | NN | denotes | p55 |
| T312 | 70-73 | NN | denotes | TNF |
| T311 | 62-69 | JJ | denotes | soluble |
| T310 | 58-61 | CC | denotes | and |
| T309 | 56-57 | -COMMA- | denotes | , |
| T308 | 49-56 | NN | denotes | saline- |
| T307 | 44-48 | IN | denotes | with |
| T306 | 36-43 | VB | denotes | infused |
| T305 | 10-35 | RB | denotes | intracerebroventricularly |
| T304 | 5-9 | VB | denotes | were |
| T303 | 0-4 | WDT | denotes | that |
| R136 | T306 | T304 | arg2Of | infused,were |
| R137 | T306 | T305 | arg1Of | infused,intracerebroventricularly |
| R138 | T306 | T307 | arg1Of | infused,with |
| R139 | T308 | T307 | arg2Of | saline-,with |
| R142 | T310 | T309 | arg1Of | and,"," |
| R143 | T314 | T310 | arg2Of | receptor,and |
| R144 | T314 | T311 | arg1Of | receptor,soluble |
| R145 | T314 | T312 | arg1Of | receptor,TNF |
| R146 | T314 | T313 | arg1Of | receptor,p55 |
| R147 | T314 | T315 | arg1Of | receptor,( |
| R148 | T314 | T318 | arg1Of | receptor,prior |
| R149 | T316 | T315 | arg2Of | sTNFp55R,( |
| R150 | T317 | T315 | arg3Of | ),( |
| R151 | T318 | T319 | arg1Of | prior,to |
| R152 | T321 | T319 | arg2Of | induction,to |
| R153 | T321 | T320 | arg1Of | induction,SE |
| R154 | T324 | T325 | arg1Of | we,performed |
| R155 | T325 | T322 | arg1Of | performed,Thereafter |
| R156 | T325 | T323 | arg1Of | performed,"," |
| R157 | T328 | T326 | arg1Of | staining,Fluoro-Jade |
| R158 | T328 | T327 | arg1Of | staining,B |
| R159 | T328 | T329 | arg1Of | staining,and |
| R160 | T329 | T325 | arg2Of | and,performed |
| R161 | T329 | T332 | arg1Of | and,for |
| R162 | T331 | T329 | arg2Of | studies,and |
| R163 | T331 | T330 | arg1Of | studies,immunohistochemical |
| R164 | T333 | T334 | arg1Of | TNF-α,and |
| R165 | T335 | T334 | arg2Of | NF-κB,and |
| R166 | T336 | T332 | arg2Of | subunits,for |
| R167 | T336 | T333 | arg1Of | subunits,TNF-α |
| R168 | T336 | T335 | arg1Of | subunits,NF-κB |
| R169 | T339 | T338 | arg2Of | SE,Following |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T148 | 70-86 | Protein | denotes | TNF p55 receptor |
| T149 | 89-96 | Protein | denotes | TNFp55R |
| T150 | 205-210 | Protein | denotes | TNF-α |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T478 | 74-77 | http://www.uniprot.org/uniprot/P01589 | denotes | p55 |
| T467 | 70-73 | http://www.uniprot.org/uniprot/P01375 | denotes | TNF |
| T468 | 205-208 | http://www.uniprot.org/uniprot/P01375 | denotes | TNF |
| T474 | 205-210 | http://www.uniprot.org/uniprot/P01375 | denotes | TNF-α |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T109 | 232-239 | Sentence | denotes | Results |
| T108 | 121-230 | Sentence | denotes | Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits. |
| T8 | 121-230 | Sentence | denotes | Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits. |
| T9 | 232-239 | Sentence | denotes | Results |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T190 | 205-210 | Protein | denotes | TNF-α |
| T189 | 89-96 | Protein | denotes | TNFp55R |
| T188 | 70-86 | Protein | denotes | TNF p55 receptor |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T912 | 70-86 | Protein | denotes | TNF p55 receptor |
| T913 | 89-96 | Protein | denotes | TNFp55R |
| T914 | 205-210 | Protein | denotes | TNF-α |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T755 | 205-210 | Protein | denotes | TNF-α |
| T754 | 89-96 | Protein | denotes | TNFp55R |
| T753 | 70-86 | Protein | denotes | TNF p55 receptor |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T795 | 70-86 | Protein | denotes | TNF p55 receptor |
| T796 | 89-96 | Protein | denotes | TNFp55R |
| T797 | 205-210 | Protein | denotes | TNF-α |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T979 | 146-157 | Entity | denotes | Fluoro-Jade |
| T977 | 153-157 | Protein | denotes | Jade |
| T971 | 62-97 | Protein | denotes | soluble TNF p55 receptor (sTNFp55R) |
| T965 | 89-92 | Protein | denotes | TNF |
| T942 | 88-96 | Entity | denotes | sTNFp55R |
| T944 | 146-157 | Entity | denotes | Fluoro-Jade |
| T950 | 107-109 | Entity | denotes | SE |
| T954 | 205-210 | Protein | denotes | TNF-α |
| T957 | 215-220 | Protein | denotes | NF-κB |
| T961 | 250-253 | Protein | denotes | SE, |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T625 | 252-253 | , | denotes | , |
| T624 | 250-252 | NNP | denotes | SE |
| T623 | 240-249 | VBG | denotes | Following |
| T622 | 232-239 | NNS | denotes | Results |
| T621 | 229-230 | . | denotes | . |
| T620 | 221-229 | NNS | denotes | subunits |
| T619 | 215-220 | NNP | denotes | NF-κB |
| T618 | 211-214 | CC | denotes | and |
| T617 | 205-210 | NNP | denotes | TNF-α |
| T616 | 201-204 | IN | denotes | for |
| T615 | 193-200 | NNS | denotes | studies |
| T614 | 173-192 | JJ | denotes | immunohistochemical |
| T613 | 169-172 | CC | denotes | and |
| T612 | 160-168 | VBG | denotes | staining |
| T611 | 158-159 | NNP | denotes | B |
| T610 | 146-157 | NNP | denotes | Fluoro-Jade |
| T609 | 136-145 | VBD | denotes | performed |
| T608 | 133-135 | PRP | denotes | we |
| T607 | 131-132 | , | denotes | , |
| T606 | 121-131 | RB | denotes | Thereafter |
| T605 | 119-120 | . | denotes | . |
| T604 | 110-119 | NN | denotes | induction |
| T603 | 107-109 | VB | denotes | SE |
| T602 | 104-106 | TO | denotes | to |
| T601 | 98-103 | RB | denotes | prior |
| T600 | 96-97 | -RRB- | denotes | ) |
| T599 | 88-96 | JJ | denotes | sTNFp55R |
| T598 | 87-88 | -LRB- | denotes | ( |
| T597 | 78-86 | NN | denotes | receptor |
| T596 | 74-77 | NN | denotes | p55 |
| T595 | 70-73 | NNP | denotes | TNF |
| T594 | 62-69 | JJ | denotes | soluble |
| T593 | 58-61 | CC | denotes | and |
| T592 | 56-57 | , | denotes | , |
| T591 | 55-56 | : | denotes | - |
| T590 | 49-55 | NN | denotes | saline |
| T589 | 44-48 | IN | denotes | with |
| T588 | 36-43 | VBN | denotes | infused |
| T587 | 10-35 | RB | denotes | intracerebroventricularly |
| T586 | 5-9 | VBD | denotes | were |
| T585 | 0-4 | WDT | denotes | that |
| R391 | T585 | T588 | nsubjpass | that,infused |
| R392 | T586 | T588 | auxpass | were,infused |
| R393 | T587 | T588 | advmod | intracerebroventricularly,infused |
| R395 | T589 | T588 | prep | with,infused |
| R396 | T590 | T589 | pobj | saline,with |
| R397 | T591 | T590 | punct | -,saline |
| R398 | T592 | T590 | punct | ",",saline |
| R399 | T593 | T590 | cc | and,saline |
| R400 | T594 | T590 | conj | soluble,saline |
| R401 | T595 | T597 | nmod | TNF,receptor |
| R402 | T596 | T597 | compound | p55,receptor |
| R403 | T597 | T590 | conj | receptor,saline |
| R404 | T598 | T597 | punct | (,receptor |
| R405 | T599 | T597 | appos | sTNFp55R,receptor |
| R406 | T600 | T597 | punct | ),receptor |
| R407 | T601 | T588 | advmod | prior,infused |
| R408 | T602 | T601 | prep | to,prior |
| R409 | T603 | T604 | compound | SE,induction |
| R410 | T604 | T602 | pobj | induction,to |
| R412 | T606 | T609 | advmod | Thereafter,performed |
| R413 | T607 | T609 | punct | ",",performed |
| R414 | T608 | T609 | nsubj | we,performed |
| R415 | T609 | T609 | ROOT | performed,performed |
| R416 | T610 | T611 | compound | Fluoro-Jade,B |
| R417 | T611 | T609 | dobj | B,performed |
| R418 | T612 | T609 | prep | staining,performed |
| R419 | T613 | T612 | cc | and,staining |
| R420 | T614 | T615 | amod | immunohistochemical,studies |
| R421 | T615 | T612 | conj | studies,staining |
| R422 | T616 | T615 | prep | for,studies |
| R423 | T617 | T620 | nmod | TNF-α,subunits |
| R424 | T618 | T617 | cc | and,TNF-α |
| R425 | T619 | T617 | conj | NF-κB,TNF-α |
| R426 | T620 | T616 | pobj | subunits,for |
| R427 | T621 | T609 | punct | .,performed |
| R428 | T622 | T622 | ROOT | Results,Results |
| R430 | T624 | T623 | pobj | SE,Following |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T850 | 215-229 | Protein | denotes | NF-κB subunits |
| T849 | 205-210 | Protein | denotes | TNF-α |
| T847 | 70-86 | Protein | denotes | TNF p55 receptor |
| T848 | 88-96 | Protein | denotes | sTNFp55R |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T20 | 70-86 | Protein | denotes | TNF p55 receptor |
| T21 | 89-96 | Protein | denotes | TNFp55R |
| T22 | 205-210 | Protein | denotes | TNF-α |
| T38 | 110-119 | Positive_regulation | denotes | induction |
| T39 | 160-168 | Gene_expression | denotes | staining |
| R3 | T20 | T38 | themeOf | TNF p55 receptor,induction |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T74 | 205-210 | Protein | denotes | TNF-α |
| T73 | 110-119 | Positive_regulation | denotes | induction |
| T72 | 88-96 | Protein | denotes | sTNFp55R |
| T71 | 70-86 | Protein | denotes | TNF p55 receptor |
| T52 | 70-86 | Protein | denotes | TNF p55 receptor |
| T53 | 89-96 | Protein | denotes | TNFp55R |
| T54 | 205-210 | Protein | denotes | TNF-α |
| R20 | T71 | T73 | themeOf | TNF p55 receptor,induction |
| R21 | T72 | T71 | equivalentTo | sTNFp55R,TNF p55 receptor |