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PMC:3312845 / 649-923 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T336 258-266 NN denotes subunits
T335 252-257 NN denotes NF-κB
T334 248-251 CC denotes and
T333 242-247 NN denotes TNF-α
T332 238-241 IN denotes for
T331 230-237 NN denotes studies
T330 210-229 JJ denotes immunohistochemical
T329 206-209 CC denotes and
T328 197-205 NN denotes staining
T327 195-196 NN denotes B
T326 183-194 JJ denotes Fluoro-Jade
T325 173-182 VB denotes performed
T324 170-172 PRP denotes we
T323 168-169 -COMMA- denotes ,
T322 158-168 RB denotes Thereafter
T321 147-156 NN denotes induction
T320 144-146 NN denotes SE
T319 141-143 TO denotes to
T318 135-140 JJ denotes prior
T317 133-134 -RRB- denotes )
T316 125-133 NN denotes sTNFp55R
T315 124-125 -LRB- denotes (
T314 115-123 NN denotes receptor
T313 111-114 NN denotes p55
T312 107-110 NN denotes TNF
T311 99-106 JJ denotes soluble
T310 95-98 CC denotes and
T309 93-94 -COMMA- denotes ,
T308 86-93 NN denotes saline-
T307 81-85 IN denotes with
T306 73-80 VB denotes infused
T305 47-72 RB denotes intracerebroventricularly
T304 42-46 VB denotes were
T303 37-41 WDT denotes that
T302 32-36 NN denotes rats
T301 29-31 IN denotes in
T300 17-28 NN denotes pilocarpine
T299 14-16 IN denotes by
T298 6-13 VB denotes induced
T297 2-5 VB denotes was
R129 T298 T297 arg2Of induced,was
R130 T300 T301 arg1Of pilocarpine,in
R131 T300 T310 arg1Of pilocarpine,and
R132 T302 T301 arg2Of rats,in
R133 T302 T303 arg1Of rats,that
R134 T302 T304 arg1Of rats,were
R135 T302 T306 arg2Of rats,infused
R136 T306 T304 arg2Of infused,were
R137 T306 T305 arg1Of infused,intracerebroventricularly
R138 T306 T307 arg1Of infused,with
R139 T308 T307 arg2Of saline-,with
R140 T310 T298 arg1Of and,induced
R141 T310 T299 arg2Of and,by
R142 T310 T309 arg1Of and,","
R143 T314 T310 arg2Of receptor,and
R144 T314 T311 arg1Of receptor,soluble
R145 T314 T312 arg1Of receptor,TNF
R146 T314 T313 arg1Of receptor,p55
R147 T314 T315 arg1Of receptor,(
R148 T314 T318 arg1Of receptor,prior
R149 T316 T315 arg2Of sTNFp55R,(
R150 T317 T315 arg3Of ),(
R151 T318 T319 arg1Of prior,to
R152 T321 T319 arg2Of induction,to
R153 T321 T320 arg1Of induction,SE
R154 T324 T325 arg1Of we,performed
R155 T325 T322 arg1Of performed,Thereafter
R156 T325 T323 arg1Of performed,","
R157 T328 T326 arg1Of staining,Fluoro-Jade
R158 T328 T327 arg1Of staining,B
R159 T328 T329 arg1Of staining,and
R160 T329 T325 arg2Of and,performed
R161 T329 T332 arg1Of and,for
R162 T331 T329 arg2Of studies,and
R163 T331 T330 arg1Of studies,immunohistochemical
R164 T333 T334 arg1Of TNF-α,and
R165 T335 T334 arg2Of NF-κB,and
R166 T336 T332 arg2Of subunits,for
R167 T336 T333 arg1Of subunits,TNF-α
R168 T336 T335 arg1Of subunits,NF-κB

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T148 107-123 Protein denotes TNF p55 receptor
T149 126-133 Protein denotes TNFp55R
T150 242-247 Protein denotes TNF-α

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T478 111-114 http://www.uniprot.org/uniprot/P01589 denotes p55
T467 107-110 http://www.uniprot.org/uniprot/P01375 denotes TNF
T468 242-245 http://www.uniprot.org/uniprot/P01375 denotes TNF
T474 242-247 http://www.uniprot.org/uniprot/P01375 denotes TNF-α

sentences

Id Subject Object Predicate Lexical cue
T108 158-267 Sentence denotes Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits.
T8 158-267 Sentence denotes Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits.

simple1

Id Subject Object Predicate Lexical cue
T190 242-247 Protein denotes TNF-α
T189 126-133 Protein denotes TNFp55R
T188 107-123 Protein denotes TNF p55 receptor

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T912 107-123 Protein denotes TNF p55 receptor
T913 126-133 Protein denotes TNFp55R
T914 242-247 Protein denotes TNF-α

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T755 242-247 Protein denotes TNF-α
T754 126-133 Protein denotes TNFp55R
T753 107-123 Protein denotes TNF p55 receptor

DLUT931

Id Subject Object Predicate Lexical cue
T795 107-123 Protein denotes TNF p55 receptor
T796 126-133 Protein denotes TNFp55R
T797 242-247 Protein denotes TNF-α

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T979 183-194 Entity denotes Fluoro-Jade
T977 190-194 Protein denotes Jade
T971 99-134 Protein denotes soluble TNF p55 receptor (sTNFp55R)
T966 14-28 Entity denotes by pilocarpine
T965 126-129 Protein denotes TNF
T942 125-133 Entity denotes sTNFp55R
T944 183-194 Entity denotes Fluoro-Jade
T950 144-146 Entity denotes SE
T954 242-247 Protein denotes TNF-α
T957 252-257 Protein denotes NF-κB

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T621 266-267 . denotes .
T620 258-266 NNS denotes subunits
T619 252-257 NNP denotes NF-κB
T618 248-251 CC denotes and
T617 242-247 NNP denotes TNF-α
T616 238-241 IN denotes for
T615 230-237 NNS denotes studies
T614 210-229 JJ denotes immunohistochemical
T613 206-209 CC denotes and
T612 197-205 VBG denotes staining
T611 195-196 NNP denotes B
T610 183-194 NNP denotes Fluoro-Jade
T609 173-182 VBD denotes performed
T608 170-172 PRP denotes we
T607 168-169 , denotes ,
T606 158-168 RB denotes Thereafter
T605 156-157 . denotes .
T604 147-156 NN denotes induction
T603 144-146 VB denotes SE
T602 141-143 TO denotes to
T601 135-140 RB denotes prior
T600 133-134 -RRB- denotes )
T599 125-133 JJ denotes sTNFp55R
T598 124-125 -LRB- denotes (
T597 115-123 NN denotes receptor
T596 111-114 NN denotes p55
T595 107-110 NNP denotes TNF
T594 99-106 JJ denotes soluble
T593 95-98 CC denotes and
T592 93-94 , denotes ,
T591 92-93 : denotes -
T590 86-92 NN denotes saline
T589 81-85 IN denotes with
T588 73-80 VBN denotes infused
T587 47-72 RB denotes intracerebroventricularly
T586 42-46 VBD denotes were
T585 37-41 WDT denotes that
T584 32-36 NNS denotes rats
T583 29-31 IN denotes in
T582 17-28 NN denotes pilocarpine
T581 14-16 IN denotes by
T580 6-13 VBN denotes induced
T579 2-5 VBD denotes was
R385 T579 T580 auxpass was,induced
R386 T580 T580 ROOT induced,induced
R387 T581 T580 agent by,induced
R388 T582 T581 pobj pilocarpine,by
R389 T583 T580 prep in,induced
R390 T584 T583 pobj rats,in
R391 T585 T588 nsubjpass that,infused
R392 T586 T588 auxpass were,infused
R393 T587 T588 advmod intracerebroventricularly,infused
R394 T588 T584 relcl infused,rats
R395 T589 T588 prep with,infused
R396 T590 T589 pobj saline,with
R397 T591 T590 punct -,saline
R398 T592 T590 punct ",",saline
R399 T593 T590 cc and,saline
R400 T594 T590 conj soluble,saline
R401 T595 T597 nmod TNF,receptor
R402 T596 T597 compound p55,receptor
R403 T597 T590 conj receptor,saline
R404 T598 T597 punct (,receptor
R405 T599 T597 appos sTNFp55R,receptor
R406 T600 T597 punct ),receptor
R407 T601 T588 advmod prior,infused
R408 T602 T601 prep to,prior
R409 T603 T604 compound SE,induction
R410 T604 T602 pobj induction,to
R411 T605 T580 punct .,induced
R412 T606 T609 advmod Thereafter,performed
R413 T607 T609 punct ",",performed
R414 T608 T609 nsubj we,performed
R415 T609 T609 ROOT performed,performed
R416 T610 T611 compound Fluoro-Jade,B
R417 T611 T609 dobj B,performed
R418 T612 T609 prep staining,performed
R419 T613 T612 cc and,staining
R420 T614 T615 amod immunohistochemical,studies
R421 T615 T612 conj studies,staining
R422 T616 T615 prep for,studies
R423 T617 T620 nmod TNF-α,subunits
R424 T618 T617 cc and,TNF-α
R425 T619 T617 conj NF-κB,TNF-α
R426 T620 T616 pobj subunits,for
R427 T621 T609 punct .,performed

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T850 252-266 Protein denotes NF-κB subunits
T849 242-247 Protein denotes TNF-α
T847 107-123 Protein denotes TNF p55 receptor
T848 125-133 Protein denotes sTNFp55R

testone

Id Subject Object Predicate Lexical cue
T20 107-123 Protein denotes TNF p55 receptor
T21 126-133 Protein denotes TNFp55R
T22 242-247 Protein denotes TNF-α
T37 6-13 Positive_regulation denotes induced
T38 147-156 Positive_regulation denotes induction
T39 197-205 Gene_expression denotes staining
R3 T20 T38 themeOf TNF p55 receptor,induction

test3

Id Subject Object Predicate Lexical cue
T74 242-247 Protein denotes TNF-α
T73 147-156 Positive_regulation denotes induction
T72 125-133 Protein denotes sTNFp55R
T71 107-123 Protein denotes TNF p55 receptor
T52 107-123 Protein denotes TNF p55 receptor
T53 126-133 Protein denotes TNFp55R
T54 242-247 Protein denotes TNF-α
T70 6-13 Positive_regulation denotes induced
R19 T71 T70 causeOf TNF p55 receptor,induced
R20 T71 T73 themeOf TNF p55 receptor,induction
R21 T72 T71 equivalentTo sTNFp55R,TNF p55 receptor