PMC:3312845 / 647-806
Annnotations
pmc-enju-pas
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bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T148","span":{"begin":109,"end":125},"obj":"Protein"},{"id":"T149","span":{"begin":128,"end":135},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"\nSE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction."}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T478","span":{"begin":113,"end":116},"obj":"http://www.uniprot.org/uniprot/P01589"},{"id":"T467","span":{"begin":109,"end":112},"obj":"http://www.uniprot.org/uniprot/P01375"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"\nSE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction."}
sentences
{"project":"sentences","denotations":[{"id":"T107","span":{"begin":1,"end":159},"obj":"Sentence"},{"id":"T7","span":{"begin":1,"end":159},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"\nSE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction."}
simple1
{"project":"simple1","denotations":[{"id":"T189","span":{"begin":128,"end":135},"obj":"Protein"},{"id":"T188","span":{"begin":109,"end":125},"obj":"Protein"}],"text":"\nSE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction."}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T912","span":{"begin":109,"end":125},"obj":"Protein"},{"id":"T913","span":{"begin":128,"end":135},"obj":"Protein"}],"text":"\nSE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction."}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T754","span":{"begin":128,"end":135},"obj":"Protein"},{"id":"T753","span":{"begin":109,"end":125},"obj":"Protein"}],"text":"\nSE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction."}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T795","span":{"begin":109,"end":125},"obj":"Protein"},{"id":"T796","span":{"begin":128,"end":135},"obj":"Protein"}],"text":"\nSE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction."}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T989","span":{"begin":1,"end":96},"obj":"Positive_regulation"},{"id":"T988","span":{"begin":1,"end":96},"obj":"Gene_expression"},{"id":"T971","span":{"begin":101,"end":136},"obj":"Protein"},{"id":"T966","span":{"begin":16,"end":30},"obj":"Entity"},{"id":"T965","span":{"begin":128,"end":131},"obj":"Protein"},{"id":"T933","span":{"begin":1,"end":3},"obj":"Protein"},{"id":"T942","span":{"begin":127,"end":135},"obj":"Entity"},{"id":"T950","span":{"begin":146,"end":148},"obj":"Entity"}],"relations":[{"id":"R601","pred":"causeOf","subj":"T966","obj":"T989"},{"id":"R653","pred":"themeOf","subj":"T933","obj":"T988"},{"id":"R654","pred":"themeOf","subj":"T933","obj":"T989"}],"text":"\nSE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction."}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T605","span":{"begin":158,"end":159},"obj":"."},{"id":"T604","span":{"begin":149,"end":158},"obj":"NN"},{"id":"T603","span":{"begin":146,"end":148},"obj":"VB"},{"id":"T602","span":{"begin":143,"end":145},"obj":"TO"},{"id":"T601","span":{"begin":137,"end":142},"obj":"RB"},{"id":"T600","span":{"begin":135,"end":136},"obj":"-RRB-"},{"id":"T599","span":{"begin":127,"end":135},"obj":"JJ"},{"id":"T598","span":{"begin":126,"end":127},"obj":"-LRB-"},{"id":"T597","span":{"begin":117,"end":125},"obj":"NN"},{"id":"T596","span":{"begin":113,"end":116},"obj":"NN"},{"id":"T595","span":{"begin":109,"end":112},"obj":"NNP"},{"id":"T594","span":{"begin":101,"end":108},"obj":"JJ"},{"id":"T593","span":{"begin":97,"end":100},"obj":"CC"},{"id":"T592","span":{"begin":95,"end":96},"obj":","},{"id":"T591","span":{"begin":94,"end":95},"obj":":"},{"id":"T590","span":{"begin":88,"end":94},"obj":"NN"},{"id":"T589","span":{"begin":83,"end":87},"obj":"IN"},{"id":"T588","span":{"begin":75,"end":82},"obj":"VBN"},{"id":"T587","span":{"begin":49,"end":74},"obj":"RB"},{"id":"T586","span":{"begin":44,"end":48},"obj":"VBD"},{"id":"T585","span":{"begin":39,"end":43},"obj":"WDT"},{"id":"T584","span":{"begin":34,"end":38},"obj":"NNS"},{"id":"T583","span":{"begin":31,"end":33},"obj":"IN"},{"id":"T582","span":{"begin":19,"end":30},"obj":"NN"},{"id":"T581","span":{"begin":16,"end":18},"obj":"IN"},{"id":"T580","span":{"begin":8,"end":15},"obj":"VBN"},{"id":"T579","span":{"begin":4,"end":7},"obj":"VBD"},{"id":"T578","span":{"begin":1,"end":3},"obj":"NNP"}],"relations":[{"id":"R384","pred":"nsubjpass","subj":"T578","obj":"T580"},{"id":"R385","pred":"auxpass","subj":"T579","obj":"T580"},{"id":"R386","pred":"ROOT","subj":"T580","obj":"T580"},{"id":"R387","pred":"agent","subj":"T581","obj":"T580"},{"id":"R388","pred":"pobj","subj":"T582","obj":"T581"},{"id":"R389","pred":"prep","subj":"T583","obj":"T580"},{"id":"R390","pred":"pobj","subj":"T584","obj":"T583"},{"id":"R391","pred":"nsubjpass","subj":"T585","obj":"T588"},{"id":"R392","pred":"auxpass","subj":"T586","obj":"T588"},{"id":"R393","pred":"advmod","subj":"T587","obj":"T588"},{"id":"R394","pred":"relcl","subj":"T588","obj":"T584"},{"id":"R395","pred":"prep","subj":"T589","obj":"T588"},{"id":"R396","pred":"pobj","subj":"T590","obj":"T589"},{"id":"R397","pred":"punct","subj":"T591","obj":"T590"},{"id":"R398","pred":"punct","subj":"T592","obj":"T590"},{"id":"R399","pred":"cc","subj":"T593","obj":"T590"},{"id":"R400","pred":"conj","subj":"T594","obj":"T590"},{"id":"R401","pred":"nmod","subj":"T595","obj":"T597"},{"id":"R402","pred":"compound","subj":"T596","obj":"T597"},{"id":"R403","pred":"conj","subj":"T597","obj":"T590"},{"id":"R404","pred":"punct","subj":"T598","obj":"T597"},{"id":"R405","pred":"appos","subj":"T599","obj":"T597"},{"id":"R406","pred":"punct","subj":"T600","obj":"T597"},{"id":"R407","pred":"advmod","subj":"T601","obj":"T588"},{"id":"R408","pred":"prep","subj":"T602","obj":"T601"},{"id":"R409","pred":"compound","subj":"T603","obj":"T604"},{"id":"R410","pred":"pobj","subj":"T604","obj":"T602"},{"id":"R411","pred":"punct","subj":"T605","obj":"T580"}],"text":"\nSE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction."}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T847","span":{"begin":109,"end":125},"obj":"Protein"},{"id":"T848","span":{"begin":127,"end":135},"obj":"Protein"}],"text":"\nSE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction."}
testone
{"project":"testone","denotations":[{"id":"T20","span":{"begin":109,"end":125},"obj":"Protein"},{"id":"T21","span":{"begin":128,"end":135},"obj":"Protein"},{"id":"T37","span":{"begin":8,"end":15},"obj":"Positive_regulation"},{"id":"T38","span":{"begin":149,"end":158},"obj":"Positive_regulation"}],"relations":[{"id":"R3","pred":"themeOf","subj":"T20","obj":"T38"}],"text":"\nSE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction."}
test3
{"project":"test3","denotations":[{"id":"T73","span":{"begin":149,"end":158},"obj":"Positive_regulation"},{"id":"T72","span":{"begin":127,"end":135},"obj":"Protein"},{"id":"T71","span":{"begin":109,"end":125},"obj":"Protein"},{"id":"T52","span":{"begin":109,"end":125},"obj":"Protein"},{"id":"T53","span":{"begin":128,"end":135},"obj":"Protein"},{"id":"T70","span":{"begin":8,"end":15},"obj":"Positive_regulation"}],"relations":[{"id":"R19","pred":"causeOf","subj":"T71","obj":"T70"},{"id":"R20","pred":"themeOf","subj":"T71","obj":"T73"},{"id":"R21","pred":"equivalentTo","subj":"T72","obj":"T71"}],"text":"\nSE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-, and soluble TNF p55 receptor (sTNFp55R) prior to SE induction."}