
PMC:3312845 / 360-672
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T282 | 191-196 | NN | denotes | edema |
T299 | 303-305 | IN | denotes | by |
T298 | 295-302 | VB | denotes | induced |
T297 | 291-294 | VB | denotes | was |
T296 | 288-290 | NN | denotes | SE |
T295 | 280-287 | NN | denotes | Methods |
T294 | 275-277 | NN | denotes | SE |
T293 | 255-274 | JJ | denotes | pilocarpine-induced |
T292 | 252-254 | IN | denotes | by |
T291 | 243-251 | VB | denotes | provoked |
T290 | 236-242 | NN | denotes | models |
T289 | 227-235 | NN | denotes | epilepsy |
T288 | 223-226 | NN | denotes | rat |
T287 | 220-222 | IN | denotes | in |
T286 | 213-219 | NN | denotes | events |
T285 | 205-212 | JJ | denotes | related |
T284 | 201-204 | PRP-DOLLAR- | denotes | its |
T283 | 197-200 | CC | denotes | and |
T281 | 181-190 | JJ | denotes | vasogenic |
T280 | 174-180 | IN | denotes | during |
T279 | 163-173 | NN | denotes | disruption |
T278 | 161-162 | -RRB- | denotes | ) |
T277 | 158-161 | NN | denotes | BBB |
T276 | 157-158 | -LRB- | denotes | ( |
T275 | 149-156 | NN | denotes | barrier |
T274 | 137-148 | NN | denotes | blood-brain |
T273 | 134-136 | IN | denotes | in |
T272 | 131-133 | NN | denotes | -α |
T271 | 130-131 | -RRB- | denotes | ) |
T270 | 127-130 | NN | denotes | TNF |
T269 | 126-127 | -LRB- | denotes | ( |
T268 | 119-125 | NN | denotes | factor |
T267 | 110-118 | NN | denotes | necrosis |
T266 | 104-109 | NN | denotes | tumor |
T265 | 101-103 | IN | denotes | of |
T264 | 95-100 | NN | denotes | roles |
T263 | 91-94 | DT | denotes | the |
T262 | 78-90 | VB | denotes | investigated |
T261 | 75-77 | PRP | denotes | we |
T260 | 73-74 | -COMMA- | denotes | , |
T259 | 68-73 | NN | denotes | edema |
T258 | 58-67 | JJ | denotes | vasogenic |
T257 | 47-57 | JJ | denotes | SE-induced |
T256 | 44-46 | IN | denotes | of |
T255 | 34-43 | NN | denotes | mechanism |
T254 | 30-33 | DT | denotes | the |
T253 | 20-29 | VB | denotes | elucidate |
T252 | 17-19 | TO | denotes | To |
T251 | 8-15 | NN | denotes | damages |
R84 | T253 | T252 | arg1Of | elucidate,To |
R85 | T255 | T253 | arg2Of | mechanism,elucidate |
R86 | T255 | T254 | arg1Of | mechanism,the |
R87 | T255 | T256 | arg1Of | mechanism,of |
R88 | T259 | T256 | arg2Of | edema,of |
R89 | T259 | T257 | arg1Of | edema,SE-induced |
R90 | T259 | T258 | arg1Of | edema,vasogenic |
R91 | T261 | T253 | arg1Of | we,elucidate |
R92 | T261 | T262 | arg1Of | we,investigated |
R93 | T262 | T252 | modOf | investigated,To |
R94 | T262 | T260 | arg1Of | investigated,"," |
R95 | T262 | T280 | arg1Of | investigated,during |
R96 | T262 | T287 | arg1Of | investigated,in |
R97 | T264 | T262 | arg2Of | roles,investigated |
R98 | T264 | T263 | arg1Of | roles,the |
R99 | T264 | T265 | arg1Of | roles,of |
R100 | T268 | T266 | arg1Of | factor,tumor |
R101 | T268 | T267 | arg1Of | factor,necrosis |
R102 | T268 | T269 | arg1Of | factor,( |
R103 | T270 | T269 | arg2Of | TNF,( |
R104 | T271 | T269 | arg3Of | ),( |
R105 | T272 | T265 | arg2Of | -α,of |
R106 | T272 | T268 | arg1Of | -α,factor |
R107 | T272 | T273 | arg1Of | -α,in |
R108 | T275 | T274 | arg1Of | barrier,blood-brain |
R109 | T275 | T276 | arg1Of | barrier,( |
R110 | T277 | T276 | arg2Of | BBB,( |
R111 | T278 | T276 | arg3Of | ),( |
R112 | T279 | T273 | arg2Of | disruption,in |
R113 | T279 | T275 | arg1Of | disruption,barrier |
R114 | T282 | T281 | arg1Of | edema,vasogenic |
R115 | T282 | T283 | arg1Of | edema,and |
R116 | T283 | T280 | arg2Of | and,during |
R117 | T286 | T283 | arg2Of | events,and |
R118 | T286 | T284 | arg1Of | events,its |
R119 | T286 | T285 | arg1Of | events,related |
R120 | T290 | T287 | arg2Of | models,in |
R121 | T290 | T288 | arg1Of | models,rat |
R122 | T290 | T289 | arg1Of | models,epilepsy |
R123 | T290 | T291 | arg2Of | models,provoked |
R124 | T294 | T291 | arg1Of | SE,provoked |
R125 | T294 | T292 | arg2Of | SE,by |
R126 | T294 | T293 | arg1Of | SE,pilocarpine-induced |
R127 | T296 | T297 | arg1Of | SE,was |
R128 | T296 | T298 | arg2Of | SE,induced |
R129 | T298 | T297 | arg2Of | induced,was |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T147 | 104-133 | Protein | denotes | tumor necrosis factor (TNF)-α |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T466 | 127-130 | http://www.uniprot.org/uniprot/P01375 | denotes | TNF |
T473 | 127-133 | http://www.uniprot.org/uniprot/P01375 | denotes | TNF)-α |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T98 | 137-142 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T99 | 137-156 | http://purl.obolibrary.org/obo/UBERON_0000120 | denotes | blood-brain barrier |
T100 | 143-148 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T166 | 110-118 | http://purl.obolibrary.org/obo/GO_0019835 | denotes | necrosis |
T168 | 110-118 | http://purl.obolibrary.org/obo/GO_0070265 | denotes | necrosis |
T162 | 110-118 | http://purl.obolibrary.org/obo/GO_0001906 | denotes | necrosis |
T164 | 110-118 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | necrosis |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T106 | 280-287 | Sentence | denotes | Methods |
T105 | 17-278 | Sentence | denotes | To elucidate the mechanism of SE-induced vasogenic edema, we investigated the roles of tumor necrosis factor (TNF)-α in blood-brain barrier (BBB) disruption during vasogenic edema and its related events in rat epilepsy models provoked by pilocarpine-induced SE. |
T5 | 17-278 | Sentence | denotes | To elucidate the mechanism of SE-induced vasogenic edema, we investigated the roles of tumor necrosis factor (TNF)-α in blood-brain barrier (BBB) disruption during vasogenic edema and its related events in rat epilepsy models provoked by pilocarpine-induced SE. |
T6 | 280-287 | Sentence | denotes | Methods |
ICD10
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T178 | 227-235 | http://purl.bioontology.org/ontology/ICD10/G40.9 | denotes | epilepsy |
T179 | 227-235 | http://purl.bioontology.org/ontology/ICD10/G40 | denotes | epilepsy |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T187 | 104-133 | Protein | denotes | tumor necrosis factor (TNF)-α |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T911 | 104-133 | Protein | denotes | tumor necrosis factor (TNF)-α |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T752 | 104-133 | Protein | denotes | tumor necrosis factor (TNF)-α |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T794 | 104-133 | Protein | denotes | tumor necrosis factor (TNF)-α |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T974 | 47-57 | Entity | denotes | SE-induced |
T933 | 288-290 | Protein | denotes | SE |
T934 | 252-277 | Entity | denotes | by pilocarpine-induced SE |
T958 | 255-274 | Entity | denotes | pilocarpine-induced |
T959 | 101-133 | Protein | denotes | of tumor necrosis factor (TNF)-α |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T575 | 275-277 | NNP | denotes | SE |
T574 | 255-274 | JJ | denotes | pilocarpine-induced |
T573 | 252-254 | IN | denotes | by |
T572 | 243-251 | VBN | denotes | provoked |
T571 | 236-242 | NNS | denotes | models |
T570 | 227-235 | NN | denotes | epilepsy |
T569 | 223-226 | NN | denotes | rat |
T568 | 220-222 | IN | denotes | in |
T567 | 213-219 | NNS | denotes | events |
T566 | 205-212 | JJ | denotes | related |
T565 | 201-204 | PRP$ | denotes | its |
T564 | 197-200 | CC | denotes | and |
T563 | 191-196 | NN | denotes | edema |
T562 | 181-190 | JJ | denotes | vasogenic |
T561 | 174-180 | IN | denotes | during |
T560 | 163-173 | NN | denotes | disruption |
T559 | 161-162 | -RRB- | denotes | ) |
T558 | 158-161 | NNP | denotes | BBB |
T557 | 157-158 | -LRB- | denotes | ( |
T556 | 149-156 | NN | denotes | barrier |
T555 | 137-148 | JJ | denotes | blood-brain |
T554 | 134-136 | IN | denotes | in |
T553 | 132-133 | NN | denotes | α |
T552 | 131-132 | : | denotes | - |
T551 | 130-131 | -RRB- | denotes | ) |
T550 | 127-130 | NNP | denotes | TNF |
T549 | 126-127 | -LRB- | denotes | ( |
T548 | 119-125 | NN | denotes | factor |
T547 | 110-118 | NN | denotes | necrosis |
T546 | 104-109 | NN | denotes | tumor |
T545 | 101-103 | IN | denotes | of |
T544 | 95-100 | NNS | denotes | roles |
T543 | 91-94 | DT | denotes | the |
T542 | 78-90 | VBD | denotes | investigated |
T541 | 75-77 | PRP | denotes | we |
T540 | 73-74 | , | denotes | , |
T539 | 68-73 | NN | denotes | edema |
T538 | 58-67 | JJ | denotes | vasogenic |
T537 | 47-57 | JJ | denotes | SE-induced |
T536 | 44-46 | IN | denotes | of |
T535 | 34-43 | NN | denotes | mechanism |
T534 | 30-33 | DT | denotes | the |
T533 | 20-29 | VB | denotes | elucidate |
T532 | 17-19 | TO | denotes | To |
T531 | 15-16 | . | denotes | . |
T530 | 8-15 | NNS | denotes | damages |
T581 | 303-305 | IN | denotes | by |
T580 | 295-302 | VBN | denotes | induced |
T579 | 291-294 | VBD | denotes | was |
T578 | 288-290 | NNP | denotes | SE |
T577 | 280-287 | NNP | denotes | Methods |
T576 | 277-278 | . | denotes | . |
R338 | T532 | T533 | aux | To,elucidate |
R339 | T533 | T542 | advcl | elucidate,investigated |
R340 | T534 | T535 | det | the,mechanism |
R341 | T535 | T533 | dobj | mechanism,elucidate |
R342 | T536 | T535 | prep | of,mechanism |
R343 | T537 | T539 | amod | SE-induced,edema |
R344 | T538 | T539 | amod | vasogenic,edema |
R345 | T539 | T536 | pobj | edema,of |
R346 | T540 | T542 | punct | ",",investigated |
R347 | T541 | T542 | nsubj | we,investigated |
R348 | T542 | T542 | ROOT | investigated,investigated |
R349 | T543 | T544 | det | the,roles |
R350 | T544 | T542 | dobj | roles,investigated |
R351 | T545 | T544 | prep | of,roles |
R352 | T546 | T547 | compound | tumor,necrosis |
R353 | T547 | T548 | compound | necrosis,factor |
R354 | T548 | T545 | pobj | factor,of |
R355 | T549 | T550 | punct | (,TNF |
R356 | T550 | T548 | appos | TNF,factor |
R357 | T551 | T550 | punct | ),TNF |
R358 | T552 | T553 | punct | -,α |
R359 | T553 | T544 | conj | α,roles |
R360 | T554 | T553 | prep | in,α |
R361 | T555 | T556 | amod | blood-brain,barrier |
R362 | T556 | T554 | pobj | barrier,in |
R363 | T557 | T558 | punct | (,BBB |
R364 | T558 | T553 | appos | BBB,α |
R365 | T559 | T553 | punct | ),α |
R366 | T560 | T542 | npadvmod | disruption,investigated |
R367 | T561 | T560 | prep | during,disruption |
R368 | T562 | T563 | amod | vasogenic,edema |
R369 | T563 | T561 | pobj | edema,during |
R370 | T564 | T563 | cc | and,edema |
R371 | T565 | T567 | poss | its,events |
R372 | T566 | T567 | amod | related,events |
R373 | T567 | T563 | conj | events,edema |
R374 | T568 | T567 | prep | in,events |
R375 | T569 | T571 | compound | rat,models |
R376 | T570 | T571 | compound | epilepsy,models |
R377 | T571 | T568 | pobj | models,in |
R378 | T572 | T571 | acl | provoked,models |
R379 | T573 | T572 | agent | by,provoked |
R380 | T574 | T575 | amod | pilocarpine-induced,SE |
R381 | T575 | T573 | pobj | SE,by |
R382 | T576 | T542 | punct | .,investigated |
R383 | T577 | T578 | compound | Methods,SE |
R384 | T578 | T580 | nsubjpass | SE,induced |
R385 | T579 | T580 | auxpass | was,induced |
R386 | T580 | T580 | ROOT | induced,induced |
R387 | T581 | T580 | agent | by,induced |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T846 | 104-133 | Protein | denotes | tumor necrosis factor (TNF)-α |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19 | 104-133 | Protein | denotes | tumor necrosis factor (TNF)-α |
T35 | 163-173 | Negative_regulation | denotes | disruption |
T36 | 267-274 | Positive_regulation | denotes | induced |
T37 | 295-302 | Positive_regulation | denotes | induced |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T51 | 104-133 | Protein | denotes | tumor necrosis factor (TNF)-α |
T69 | 104-133 | Protein | denotes | tumor necrosis factor (TNF)-α |
T70 | 295-302 | Positive_regulation | denotes | induced |