PMC:3312845 / 35-344
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T205 | 8-11 | CD | denotes | 435 |
T206 | 12-27 | NN | denotes | phosphorylation |
T207 | 28-30 | IN | denotes | of |
T208 | 31-34 | NN | denotes | p65 |
T209 | 35-42 | JJ | denotes | nuclear |
T210 | 43-52 | NN | denotes | factor-κB |
T211 | 53-60 | NN | denotes | subunit |
T212 | 61-63 | IN | denotes | in |
T213 | 64-75 | JJ | denotes | endothelial |
T214 | 76-81 | NN | denotes | cells |
T215 | 82-89 | VB | denotes | induces |
T216 | 90-99 | JJ | denotes | vasogenic |
T217 | 100-105 | NN | denotes | edema |
T218 | 106-109 | CC | denotes | and |
T219 | 110-120 | NN | denotes | neutrophil |
T220 | 121-133 | NN | denotes | infiltration |
T221 | 134-136 | IN | denotes | in |
T222 | 137-140 | DT | denotes | the |
T223 | 141-144 | NN | denotes | rat |
T224 | 145-153 | NN | denotes | piriform |
T225 | 154-160 | NN | denotes | cortex |
T226 | 161-170 | VB | denotes | following |
T227 | 171-177 | NN | denotes | status |
T228 | 178-189 | NN | denotes | epilepticus |
T247 | 306-308 | IN | denotes | by |
T246 | 294-305 | VB | denotes | accompanied |
T245 | 292-293 | -RRB- | denotes | ) |
T244 | 290-292 | NN | denotes | PC |
T243 | 289-290 | -LRB- | denotes | ( |
T242 | 282-288 | NN | denotes | cortex |
T241 | 273-281 | NN | denotes | piriform |
T240 | 269-272 | DT | denotes | the |
T239 | 266-268 | IN | denotes | in |
T238 | 260-265 | NN | denotes | edema |
T237 | 250-259 | JJ | denotes | vasogenic |
T236 | 243-249 | JJ | denotes | severe |
T235 | 235-242 | VB | denotes | induces |
T234 | 233-234 | -RRB- | denotes | ) |
T233 | 231-233 | NN | denotes | SE |
T232 | 230-231 | -LRB- | denotes | ( |
T231 | 218-229 | NN | denotes | epilepticus |
T230 | 211-217 | NN | denotes | Status |
T229 | 200-210 | NN | denotes | Background |
R39 | T206 | T205 | arg1Of | phosphorylation,435 |
R40 | T206 | T207 | arg1Of | phosphorylation,of |
R41 | T206 | T212 | arg1Of | phosphorylation,in |
R42 | T206 | T215 | arg1Of | phosphorylation,induces |
R43 | T211 | T207 | arg2Of | subunit,of |
R44 | T211 | T208 | arg1Of | subunit,p65 |
R45 | T211 | T209 | arg1Of | subunit,nuclear |
R46 | T211 | T210 | arg1Of | subunit,factor-κB |
R47 | T214 | T212 | arg2Of | cells,in |
R48 | T214 | T213 | arg1Of | cells,endothelial |
R49 | T215 | T221 | arg1Of | induces,in |
R50 | T217 | T216 | arg1Of | edema,vasogenic |
R51 | T217 | T218 | arg1Of | edema,and |
R52 | T218 | T215 | arg2Of | and,induces |
R53 | T220 | T218 | arg2Of | infiltration,and |
R54 | T220 | T219 | arg1Of | infiltration,neutrophil |
R55 | T225 | T221 | arg2Of | cortex,in |
R56 | T225 | T222 | arg1Of | cortex,the |
R57 | T225 | T223 | arg1Of | cortex,rat |
R58 | T225 | T224 | arg1Of | cortex,piriform |
R59 | T225 | T226 | arg1Of | cortex,following |
R60 | T228 | T226 | arg2Of | epilepticus,following |
R61 | T228 | T227 | arg1Of | epilepticus,status |
R62 | T231 | T230 | arg1Of | epilepticus,Status |
R63 | T231 | T232 | arg1Of | epilepticus,( |
R64 | T231 | T235 | arg1Of | epilepticus,induces |
R65 | T233 | T232 | arg2Of | SE,( |
R66 | T234 | T232 | arg3Of | ),( |
R67 | T235 | T239 | arg1Of | induces,in |
R68 | T238 | T235 | arg2Of | edema,induces |
R69 | T238 | T236 | arg1Of | edema,severe |
R70 | T238 | T237 | arg1Of | edema,vasogenic |
R71 | T242 | T239 | arg2Of | cortex,in |
R72 | T242 | T240 | arg1Of | cortex,the |
R73 | T242 | T241 | arg1Of | cortex,piriform |
R74 | T242 | T243 | arg1Of | cortex,( |
R75 | T242 | T246 | arg2Of | cortex,accompanied |
R76 | T244 | T243 | arg2Of | PC,( |
R77 | T245 | T243 | arg3Of | ),( |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T146 | 31-34 | Protein | denotes | p65 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T458 | 31-34 | http://www.uniprot.org/uniprot/Q04206 | denotes | p65 |
T462 | 31-34 | http://www.uniprot.org/uniprot/P21579 | denotes | p65 |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T94 | 145-160 | http://purl.obolibrary.org/obo/UBERON_0004725 | denotes | piriform cortex |
T96 | 154-160 | http://purl.obolibrary.org/obo/UBERON_0001851 | denotes | cortex |
T95 | 273-288 | http://purl.obolibrary.org/obo/UBERON_0004725 | denotes | piriform cortex |
T97 | 282-288 | http://purl.obolibrary.org/obo/UBERON_0001851 | denotes | cortex |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T169 | 12-27 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T180 | 76-81 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T103 | 200-210 | Sentence | denotes | Background |
T2 | 191-199 | Sentence | denotes | Abstract |
T3 | 200-210 | Sentence | denotes | Background |
ICD10
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T174 | 171-189 | http://purl.bioontology.org/ontology/ICD10/G41.9 | denotes | status epilepticus |
T176 | 171-189 | http://purl.bioontology.org/ontology/ICD10/G41 | denotes | status epilepticus |
T175 | 211-229 | http://purl.bioontology.org/ontology/ICD10/G41.9 | denotes | Status epilepticus |
T177 | 211-229 | http://purl.bioontology.org/ontology/ICD10/G41 | denotes | Status epilepticus |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T186 | 31-34 | Protein | denotes | p65 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T910 | 31-34 | Protein | denotes | p65 |
T925 | 12-27 | Phosphorylation | denotes | phosphorylation |
R646 | T910 | T925 | themeOf | p65,phosphorylation |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T766 | 12-27 | Phosphorylation | denotes | phosphorylation |
T751 | 31-34 | Protein | denotes | p65 |
R622 | T751 | T766 | themeOf | p65,phosphorylation |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T793 | 31-34 | Protein | denotes | p65 |
T808 | 12-27 | Phosphorylation | denotes | phosphorylation |
T809 | 82-89 | Positive_regulation | denotes | induces |
R624 | T793 | T808 | themeOf | p65,phosphorylation |
R632 | T808 | T809 | themeOf | phosphorylation,induces |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T970 | 290-292 | Protein | denotes | PC |
T967 | 231-233 | Entity | denotes | SE |
T940 | 64-81 | Entity | denotes | endothelial cells |
T962 | 110-120 | Entity | denotes | neutrophil |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T484 | 8-11 | CD | denotes | 435 |
T485 | 12-27 | NN | denotes | phosphorylation |
T486 | 28-30 | IN | denotes | of |
T487 | 31-34 | CD | denotes | p65 |
T488 | 35-42 | JJ | denotes | nuclear |
T489 | 43-52 | JJ | denotes | factor-κB |
T490 | 53-60 | NN | denotes | subunit |
T491 | 61-63 | IN | denotes | in |
T492 | 64-75 | JJ | denotes | endothelial |
T493 | 76-81 | NNS | denotes | cells |
T494 | 82-89 | VBZ | denotes | induces |
T495 | 90-99 | JJ | denotes | vasogenic |
T496 | 100-105 | NN | denotes | edema |
T497 | 106-109 | CC | denotes | and |
T498 | 110-120 | NN | denotes | neutrophil |
T499 | 121-133 | NN | denotes | infiltration |
T500 | 134-136 | IN | denotes | in |
T501 | 137-140 | DT | denotes | the |
T502 | 141-144 | NN | denotes | rat |
T503 | 145-153 | NN | denotes | piriform |
T504 | 154-160 | NN | denotes | cortex |
T505 | 161-170 | VBG | denotes | following |
T506 | 171-177 | NN | denotes | status |
T507 | 178-189 | NN | denotes | epilepticus |
T526 | 306-308 | IN | denotes | by |
T525 | 294-305 | VBN | denotes | accompanied |
T524 | 292-293 | -RRB- | denotes | ) |
T523 | 290-292 | NN | denotes | PC |
T522 | 289-290 | -LRB- | denotes | ( |
T521 | 282-288 | NN | denotes | cortex |
T520 | 273-281 | NN | denotes | piriform |
T519 | 269-272 | DT | denotes | the |
T518 | 266-268 | IN | denotes | in |
T517 | 260-265 | NN | denotes | edema |
T516 | 250-259 | JJ | denotes | vasogenic |
T515 | 243-249 | JJ | denotes | severe |
T514 | 235-242 | VBZ | denotes | induces |
T513 | 233-234 | -RRB- | denotes | ) |
T512 | 231-233 | FW | denotes | SE |
T511 | 230-231 | -LRB- | denotes | ( |
T510 | 218-229 | NN | denotes | epilepticus |
T509 | 211-217 | NNP | denotes | Status |
T508 | 200-210 | NNP | denotes | Background |
R290 | T484 | T485 | nummod | 435,phosphorylation |
R292 | T486 | T485 | prep | of,phosphorylation |
R293 | T487 | T490 | nummod | p65,subunit |
R294 | T488 | T490 | amod | nuclear,subunit |
R295 | T489 | T490 | amod | factor-κB,subunit |
R296 | T490 | T486 | pobj | subunit,of |
R297 | T491 | T485 | prep | in,phosphorylation |
R298 | T492 | T493 | amod | endothelial,cells |
R299 | T493 | T491 | pobj | cells,in |
R300 | T494 | T494 | ROOT | induces,induces |
R301 | T495 | T496 | amod | vasogenic,edema |
R302 | T496 | T494 | dobj | edema,induces |
R303 | T497 | T496 | cc | and,edema |
R304 | T498 | T499 | compound | neutrophil,infiltration |
R305 | T499 | T496 | conj | infiltration,edema |
R306 | T500 | T494 | prep | in,induces |
R307 | T501 | T514 | det | the,induces |
R308 | T502 | T503 | compound | rat,piriform |
R309 | T503 | T504 | compound | piriform,cortex |
R310 | T504 | T505 | advmod | cortex,following |
R311 | T505 | T507 | amod | following,epilepticus |
R312 | T506 | T507 | compound | status,epilepticus |
R313 | T507 | T514 | nsubj | epilepticus,induces |
R314 | T508 | T509 | compound | Background,Status |
R315 | T509 | T510 | compound | Status,epilepticus |
R316 | T510 | T507 | appos | epilepticus,epilepticus |
R317 | T511 | T512 | punct | (,SE |
R318 | T512 | T510 | appos | SE,epilepticus |
R319 | T513 | T510 | punct | ),epilepticus |
R320 | T514 | T494 | conj | induces,induces |
R321 | T515 | T517 | amod | severe,edema |
R322 | T516 | T517 | amod | vasogenic,edema |
R323 | T517 | T514 | dobj | edema,induces |
R324 | T518 | T514 | prep | in,induces |
R325 | T519 | T521 | det | the,cortex |
R326 | T520 | T521 | compound | piriform,cortex |
R327 | T521 | T518 | pobj | cortex,in |
R328 | T522 | T521 | punct | (,cortex |
R329 | T523 | T521 | appos | PC,cortex |
R330 | T524 | T521 | punct | ),cortex |
R331 | T525 | T514 | advcl | accompanied,induces |
R332 | T526 | T525 | agent | by,accompanied |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T842 | 31-60 | Protein | denotes | p65 nuclear factor-κB subunit |
T843 | 12-27 | Phosphorylation | denotes | phosphorylation |
T844 | 82-89 | Positive_regulation | denotes | induces |
R642 | T842 | T843 | themeOf | p65 nuclear factor-κB subunit,phosphorylation |
R643 | T843 | T844 | themeOf | phosphorylation,induces |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18 | 31-34 | Protein | denotes | p65 |
T34 | 12-27 | Phosphorylation | denotes | phosphorylation |
R2 | T18 | T34 | themeOf | p65,phosphorylation |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T50 | 31-34 | Protein | denotes | p65 |
T67 | 12-27 | Phosphorylation | denotes | phosphorylation |
T68 | 31-34 | Protein | denotes | p65 |
R18 | T68 | T67 | themeOf | p65,phosphorylation |