PMC:3312845 / 35-344
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T205 | 8-11 | CD | denotes | 435 |
| T206 | 12-27 | NN | denotes | phosphorylation |
| T207 | 28-30 | IN | denotes | of |
| T208 | 31-34 | NN | denotes | p65 |
| T209 | 35-42 | JJ | denotes | nuclear |
| T210 | 43-52 | NN | denotes | factor-κB |
| T211 | 53-60 | NN | denotes | subunit |
| T212 | 61-63 | IN | denotes | in |
| T213 | 64-75 | JJ | denotes | endothelial |
| T214 | 76-81 | NN | denotes | cells |
| T215 | 82-89 | VB | denotes | induces |
| T216 | 90-99 | JJ | denotes | vasogenic |
| T217 | 100-105 | NN | denotes | edema |
| T218 | 106-109 | CC | denotes | and |
| T219 | 110-120 | NN | denotes | neutrophil |
| T220 | 121-133 | NN | denotes | infiltration |
| T221 | 134-136 | IN | denotes | in |
| T222 | 137-140 | DT | denotes | the |
| T223 | 141-144 | NN | denotes | rat |
| T224 | 145-153 | NN | denotes | piriform |
| T225 | 154-160 | NN | denotes | cortex |
| T226 | 161-170 | VB | denotes | following |
| T227 | 171-177 | NN | denotes | status |
| T228 | 178-189 | NN | denotes | epilepticus |
| T247 | 306-308 | IN | denotes | by |
| T246 | 294-305 | VB | denotes | accompanied |
| T245 | 292-293 | -RRB- | denotes | ) |
| T244 | 290-292 | NN | denotes | PC |
| T243 | 289-290 | -LRB- | denotes | ( |
| T242 | 282-288 | NN | denotes | cortex |
| T241 | 273-281 | NN | denotes | piriform |
| T240 | 269-272 | DT | denotes | the |
| T239 | 266-268 | IN | denotes | in |
| T238 | 260-265 | NN | denotes | edema |
| T237 | 250-259 | JJ | denotes | vasogenic |
| T236 | 243-249 | JJ | denotes | severe |
| T235 | 235-242 | VB | denotes | induces |
| T234 | 233-234 | -RRB- | denotes | ) |
| T233 | 231-233 | NN | denotes | SE |
| T232 | 230-231 | -LRB- | denotes | ( |
| T231 | 218-229 | NN | denotes | epilepticus |
| T230 | 211-217 | NN | denotes | Status |
| T229 | 200-210 | NN | denotes | Background |
| R39 | T206 | T205 | arg1Of | phosphorylation,435 |
| R40 | T206 | T207 | arg1Of | phosphorylation,of |
| R41 | T206 | T212 | arg1Of | phosphorylation,in |
| R42 | T206 | T215 | arg1Of | phosphorylation,induces |
| R43 | T211 | T207 | arg2Of | subunit,of |
| R44 | T211 | T208 | arg1Of | subunit,p65 |
| R45 | T211 | T209 | arg1Of | subunit,nuclear |
| R46 | T211 | T210 | arg1Of | subunit,factor-κB |
| R47 | T214 | T212 | arg2Of | cells,in |
| R48 | T214 | T213 | arg1Of | cells,endothelial |
| R49 | T215 | T221 | arg1Of | induces,in |
| R50 | T217 | T216 | arg1Of | edema,vasogenic |
| R51 | T217 | T218 | arg1Of | edema,and |
| R52 | T218 | T215 | arg2Of | and,induces |
| R53 | T220 | T218 | arg2Of | infiltration,and |
| R54 | T220 | T219 | arg1Of | infiltration,neutrophil |
| R55 | T225 | T221 | arg2Of | cortex,in |
| R56 | T225 | T222 | arg1Of | cortex,the |
| R57 | T225 | T223 | arg1Of | cortex,rat |
| R58 | T225 | T224 | arg1Of | cortex,piriform |
| R59 | T225 | T226 | arg1Of | cortex,following |
| R60 | T228 | T226 | arg2Of | epilepticus,following |
| R61 | T228 | T227 | arg1Of | epilepticus,status |
| R62 | T231 | T230 | arg1Of | epilepticus,Status |
| R63 | T231 | T232 | arg1Of | epilepticus,( |
| R64 | T231 | T235 | arg1Of | epilepticus,induces |
| R65 | T233 | T232 | arg2Of | SE,( |
| R66 | T234 | T232 | arg3Of | ),( |
| R67 | T235 | T239 | arg1Of | induces,in |
| R68 | T238 | T235 | arg2Of | edema,induces |
| R69 | T238 | T236 | arg1Of | edema,severe |
| R70 | T238 | T237 | arg1Of | edema,vasogenic |
| R71 | T242 | T239 | arg2Of | cortex,in |
| R72 | T242 | T240 | arg1Of | cortex,the |
| R73 | T242 | T241 | arg1Of | cortex,piriform |
| R74 | T242 | T243 | arg1Of | cortex,( |
| R75 | T242 | T246 | arg2Of | cortex,accompanied |
| R76 | T244 | T243 | arg2Of | PC,( |
| R77 | T245 | T243 | arg3Of | ),( |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T146 | 31-34 | Protein | denotes | p65 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T458 | 31-34 | http://www.uniprot.org/uniprot/Q04206 | denotes | p65 |
| T462 | 31-34 | http://www.uniprot.org/uniprot/P21579 | denotes | p65 |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T94 | 145-160 | http://purl.obolibrary.org/obo/UBERON_0004725 | denotes | piriform cortex |
| T96 | 154-160 | http://purl.obolibrary.org/obo/UBERON_0001851 | denotes | cortex |
| T95 | 273-288 | http://purl.obolibrary.org/obo/UBERON_0004725 | denotes | piriform cortex |
| T97 | 282-288 | http://purl.obolibrary.org/obo/UBERON_0001851 | denotes | cortex |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T169 | 12-27 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T180 | 76-81 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T103 | 200-210 | Sentence | denotes | Background |
| T2 | 191-199 | Sentence | denotes | Abstract |
| T3 | 200-210 | Sentence | denotes | Background |
ICD10
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T174 | 171-189 | http://purl.bioontology.org/ontology/ICD10/G41.9 | denotes | status epilepticus |
| T176 | 171-189 | http://purl.bioontology.org/ontology/ICD10/G41 | denotes | status epilepticus |
| T175 | 211-229 | http://purl.bioontology.org/ontology/ICD10/G41.9 | denotes | Status epilepticus |
| T177 | 211-229 | http://purl.bioontology.org/ontology/ICD10/G41 | denotes | Status epilepticus |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T186 | 31-34 | Protein | denotes | p65 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T910 | 31-34 | Protein | denotes | p65 |
| T925 | 12-27 | Phosphorylation | denotes | phosphorylation |
| R646 | T910 | T925 | themeOf | p65,phosphorylation |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T766 | 12-27 | Phosphorylation | denotes | phosphorylation |
| T751 | 31-34 | Protein | denotes | p65 |
| R622 | T751 | T766 | themeOf | p65,phosphorylation |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T793 | 31-34 | Protein | denotes | p65 |
| T808 | 12-27 | Phosphorylation | denotes | phosphorylation |
| T809 | 82-89 | Positive_regulation | denotes | induces |
| R624 | T793 | T808 | themeOf | p65,phosphorylation |
| R632 | T808 | T809 | themeOf | phosphorylation,induces |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T970 | 290-292 | Protein | denotes | PC |
| T967 | 231-233 | Entity | denotes | SE |
| T940 | 64-81 | Entity | denotes | endothelial cells |
| T962 | 110-120 | Entity | denotes | neutrophil |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T484 | 8-11 | CD | denotes | 435 |
| T485 | 12-27 | NN | denotes | phosphorylation |
| T486 | 28-30 | IN | denotes | of |
| T487 | 31-34 | CD | denotes | p65 |
| T488 | 35-42 | JJ | denotes | nuclear |
| T489 | 43-52 | JJ | denotes | factor-κB |
| T490 | 53-60 | NN | denotes | subunit |
| T491 | 61-63 | IN | denotes | in |
| T492 | 64-75 | JJ | denotes | endothelial |
| T493 | 76-81 | NNS | denotes | cells |
| T494 | 82-89 | VBZ | denotes | induces |
| T495 | 90-99 | JJ | denotes | vasogenic |
| T496 | 100-105 | NN | denotes | edema |
| T497 | 106-109 | CC | denotes | and |
| T498 | 110-120 | NN | denotes | neutrophil |
| T499 | 121-133 | NN | denotes | infiltration |
| T500 | 134-136 | IN | denotes | in |
| T501 | 137-140 | DT | denotes | the |
| T502 | 141-144 | NN | denotes | rat |
| T503 | 145-153 | NN | denotes | piriform |
| T504 | 154-160 | NN | denotes | cortex |
| T505 | 161-170 | VBG | denotes | following |
| T506 | 171-177 | NN | denotes | status |
| T507 | 178-189 | NN | denotes | epilepticus |
| T526 | 306-308 | IN | denotes | by |
| T525 | 294-305 | VBN | denotes | accompanied |
| T524 | 292-293 | -RRB- | denotes | ) |
| T523 | 290-292 | NN | denotes | PC |
| T522 | 289-290 | -LRB- | denotes | ( |
| T521 | 282-288 | NN | denotes | cortex |
| T520 | 273-281 | NN | denotes | piriform |
| T519 | 269-272 | DT | denotes | the |
| T518 | 266-268 | IN | denotes | in |
| T517 | 260-265 | NN | denotes | edema |
| T516 | 250-259 | JJ | denotes | vasogenic |
| T515 | 243-249 | JJ | denotes | severe |
| T514 | 235-242 | VBZ | denotes | induces |
| T513 | 233-234 | -RRB- | denotes | ) |
| T512 | 231-233 | FW | denotes | SE |
| T511 | 230-231 | -LRB- | denotes | ( |
| T510 | 218-229 | NN | denotes | epilepticus |
| T509 | 211-217 | NNP | denotes | Status |
| T508 | 200-210 | NNP | denotes | Background |
| R290 | T484 | T485 | nummod | 435,phosphorylation |
| R292 | T486 | T485 | prep | of,phosphorylation |
| R293 | T487 | T490 | nummod | p65,subunit |
| R294 | T488 | T490 | amod | nuclear,subunit |
| R295 | T489 | T490 | amod | factor-κB,subunit |
| R296 | T490 | T486 | pobj | subunit,of |
| R297 | T491 | T485 | prep | in,phosphorylation |
| R298 | T492 | T493 | amod | endothelial,cells |
| R299 | T493 | T491 | pobj | cells,in |
| R300 | T494 | T494 | ROOT | induces,induces |
| R301 | T495 | T496 | amod | vasogenic,edema |
| R302 | T496 | T494 | dobj | edema,induces |
| R303 | T497 | T496 | cc | and,edema |
| R304 | T498 | T499 | compound | neutrophil,infiltration |
| R305 | T499 | T496 | conj | infiltration,edema |
| R306 | T500 | T494 | prep | in,induces |
| R307 | T501 | T514 | det | the,induces |
| R308 | T502 | T503 | compound | rat,piriform |
| R309 | T503 | T504 | compound | piriform,cortex |
| R310 | T504 | T505 | advmod | cortex,following |
| R311 | T505 | T507 | amod | following,epilepticus |
| R312 | T506 | T507 | compound | status,epilepticus |
| R313 | T507 | T514 | nsubj | epilepticus,induces |
| R314 | T508 | T509 | compound | Background,Status |
| R315 | T509 | T510 | compound | Status,epilepticus |
| R316 | T510 | T507 | appos | epilepticus,epilepticus |
| R317 | T511 | T512 | punct | (,SE |
| R318 | T512 | T510 | appos | SE,epilepticus |
| R319 | T513 | T510 | punct | ),epilepticus |
| R320 | T514 | T494 | conj | induces,induces |
| R321 | T515 | T517 | amod | severe,edema |
| R322 | T516 | T517 | amod | vasogenic,edema |
| R323 | T517 | T514 | dobj | edema,induces |
| R324 | T518 | T514 | prep | in,induces |
| R325 | T519 | T521 | det | the,cortex |
| R326 | T520 | T521 | compound | piriform,cortex |
| R327 | T521 | T518 | pobj | cortex,in |
| R328 | T522 | T521 | punct | (,cortex |
| R329 | T523 | T521 | appos | PC,cortex |
| R330 | T524 | T521 | punct | ),cortex |
| R331 | T525 | T514 | advcl | accompanied,induces |
| R332 | T526 | T525 | agent | by,accompanied |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T842 | 31-60 | Protein | denotes | p65 nuclear factor-κB subunit |
| T843 | 12-27 | Phosphorylation | denotes | phosphorylation |
| T844 | 82-89 | Positive_regulation | denotes | induces |
| R642 | T842 | T843 | themeOf | p65 nuclear factor-κB subunit,phosphorylation |
| R643 | T843 | T844 | themeOf | phosphorylation,induces |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T18 | 31-34 | Protein | denotes | p65 |
| T34 | 12-27 | Phosphorylation | denotes | phosphorylation |
| R2 | T18 | T34 | themeOf | p65,phosphorylation |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T50 | 31-34 | Protein | denotes | p65 |
| T67 | 12-27 | Phosphorylation | denotes | phosphorylation |
| T68 | 31-34 | Protein | denotes | p65 |
| R18 | T68 | T67 | themeOf | p65,phosphorylation |