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PMC:3312845 / 31982-32103 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12515 118-120 NN denotes SE
T12514 108-117 VB denotes following
T12513 97-107 NN denotes astrocytes
T12512 94-96 IN denotes in
T12511 68-93 NN denotes p65-Ser311phosphorylation
T12510 64-67 CC denotes and
T12509 53-63 NN denotes p65-Ser276
T12508 43-52 VB denotes inhibited
T12507 31-42 RB denotes effectively
T12506 22-30 NN denotes infusion
T12505 13-21 NN denotes sTNFp55R
T12504 11-12 -COMMA- denotes ,
T12503 0-11 RB denotes Furthermore
R9755 T12506 T12505 arg1Of infusion,sTNFp55R
R9756 T12506 T12508 arg1Of infusion,inhibited
R9757 T12508 T12503 arg1Of inhibited,Furthermore
R9758 T12508 T12504 arg1Of inhibited,","
R9759 T12508 T12507 arg1Of inhibited,effectively
R9760 T12508 T12514 arg1Of inhibited,following
R9761 T12509 T12510 arg1Of p65-Ser276,and
R9762 T12510 T12508 arg2Of and,inhibited
R9763 T12510 T12512 arg1Of and,in
R9764 T12511 T12510 arg2Of p65-Ser311phosphorylation,and
R9765 T12513 T12512 arg2Of astrocytes,in
R9766 T12515 T12514 arg2Of SE,following

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T11688 68-71 Protein denotes p65
T11687 53-56 Protein denotes p65
T11686 14-21 Protein denotes TNFp55R

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T12876 68-71 http://www.uniprot.org/uniprot/P21579 denotes p65
T12875 53-56 http://www.uniprot.org/uniprot/P21579 denotes p65
T12857 68-71 http://www.uniprot.org/uniprot/Q04206 denotes p65
T12856 53-56 http://www.uniprot.org/uniprot/Q04206 denotes p65

sentences

Id Subject Object Predicate Lexical cue
T11648 0-121 Sentence denotes Furthermore, sTNFp55R infusion effectively inhibited p65-Ser276 and p65-Ser311phosphorylation in astrocytes following SE.
T233 0-121 Sentence denotes Furthermore, sTNFp55R infusion effectively inhibited p65-Ser276 and p65-Ser311phosphorylation in astrocytes following SE.

simple1

Id Subject Object Predicate Lexical cue
T11941 68-71 Protein denotes p65
T11940 53-56 Protein denotes p65
T11939 14-21 Protein denotes TNFp55R

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T14246 72-93 Phosphorylation denotes Ser311phosphorylation
T14245 43-52 Negative_regulation denotes inhibited
T14210 68-71 Protein denotes p65
T14209 53-56 Protein denotes p65
T14208 14-21 Protein denotes TNFp55R
R11166 T14209 T14245 themeOf p65,inhibited
R11167 T14210 T14246 themeOf p65,Ser311phosphorylation
R11168 T14210 T14245 themeOf p65,inhibited

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T13846 72-93 Phosphorylation denotes Ser311phosphorylation
T13845 43-52 Negative_regulation denotes inhibited
T13813 68-71 Protein denotes p65
T13812 53-56 Protein denotes p65
T13811 14-21 Protein denotes TNFp55R
R10985 T13812 T13845 themeOf p65,inhibited
R10987 T13813 T13846 themeOf p65,Ser311phosphorylation
R10988 T13813 T13845 themeOf p65,inhibited

DLUT931

Id Subject Object Predicate Lexical cue
T13923 72-93 Phosphorylation denotes Ser311phosphorylation
T13922 43-52 Negative_regulation denotes inhibited
T13888 68-71 Protein denotes p65
T13887 53-56 Protein denotes p65
T13886 14-21 Protein denotes TNFp55R
R11004 T13887 T13922 themeOf p65,inhibited
R11005 T13887 T13923 themeOf p65,Ser311phosphorylation
R11007 T13888 T13923 themeOf p65,Ser311phosphorylation
R11031 T13923 T13922 themeOf Ser311phosphorylation,inhibited
R11032 T13923 T13922 themeOf Ser311phosphorylation,inhibited

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T14309 118-120 Protein denotes SE
T14304 13-30 Entity denotes sTNFp55R infusion
T14267 53-63 Protein denotes p65-Ser276
T14384 53-63 Entity denotes p65-Ser276
T14351 97-107 Entity denotes astrocytes
T14349 14-17 Protein denotes TNF

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T13466 120-121 . denotes .
T13465 118-120 NNP denotes SE
T13464 108-117 VBG denotes following
T13463 97-107 NNS denotes astrocytes
T13462 94-96 IN denotes in
T13461 68-93 NN denotes p65-Ser311phosphorylation
T13460 64-67 CC denotes and
T13459 53-63 NN denotes p65-Ser276
T13458 43-52 VBD denotes inhibited
T13457 31-42 RB denotes effectively
T13456 22-30 NN denotes infusion
T13455 13-21 JJ denotes sTNFp55R
T13454 11-12 , denotes ,
T13453 0-11 RB denotes Furthermore
R10640 T13453 T13458 advmod Furthermore,inhibited
R10641 T13454 T13458 punct ",",inhibited
R10642 T13455 T13456 amod sTNFp55R,infusion
R10643 T13456 T13458 nsubj infusion,inhibited
R10644 T13457 T13458 advmod effectively,inhibited
R10645 T13458 T13458 ROOT inhibited,inhibited
R10646 T13459 T13458 dobj p65-Ser276,inhibited
R10647 T13460 T13459 cc and,p65-Ser276
R10648 T13461 T13459 conj p65-Ser311phosphorylation,p65-Ser276
R10649 T13462 T13458 prep in,inhibited
R10650 T13463 T13462 pobj astrocytes,in
R10651 T13464 T13463 prep following,astrocytes
R10652 T13465 T13464 pobj SE,following
R10653 T13466 T13458 punct .,inhibited

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T13988 43-52 Negative_regulation denotes inhibited
T13987 43-52 Negative_regulation denotes inhibited
T13986 68-93 Phosphorylation denotes p65-Ser311phosphorylation
T13985 68-93 Phosphorylation denotes p65-Ser311phosphorylation
T13984 43-52 Negative_regulation denotes inhibited
T13983 57-63 Protein denotes Ser276
T13982 53-56 Protein denotes p65
T13981 13-21 Protein denotes sTNFp55R
R11068 T13982 T13985 themeOf p65,p65-Ser311phosphorylation
R11069 T13983 T13984 themeOf Ser276,inhibited
R11071 T13983 T13986 themeOf Ser276,p65-Ser311phosphorylation
R11072 T13985 T13987 themeOf p65-Ser311phosphorylation,inhibited
R11074 T13986 T13988 themeOf p65-Ser311phosphorylation,inhibited

testone

Id Subject Object Predicate Lexical cue
T11397 68-71 Protein denotes p65
T11396 53-56 Protein denotes p65
T11395 14-21 Protein denotes TNFp55R
T11447 108-117 Positive_regulation denotes following
T11446 57-63 Entity denotes Ser276
T11445 43-52 Negative_regulation denotes inhibited
R9075 T11446 T11396 partOf Ser276,p65

test3

Id Subject Object Predicate Lexical cue
T11566 108-117 Positive_regulation denotes following
T11565 72-93 Phosphorylation denotes Ser311phosphorylation
T11564 68-71 Protein denotes p65
T11563 57-63 Entity denotes Ser276
T11562 53-56 Protein denotes p65
T11561 43-52 Negative_regulation denotes inhibited
T11560 13-21 Protein denotes sTNFp55R
T11495 68-71 Protein denotes p65
T11494 53-56 Protein denotes p65
T11493 14-21 Protein denotes TNFp55R
R9111 T11560 T11561 causeOf sTNFp55R,inhibited
R9112 T11562 T11565 themeOf p65,Ser311phosphorylation
R9113 T11563 T11565 themeOf Ser276,Ser311phosphorylation
R9114 T11563 T11561 themeOf Ser276,inhibited
R9115 T11563 T11562 partOf Ser276,p65
R9116 T11564 T11565 themeOf p65,Ser311phosphorylation
R9117 T11565 T11561 themeOf Ser311phosphorylation,inhibited
R9118 T11565 T11566 themeOf Ser311phosphorylation,following