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PMC:3312845 / 31111-31159 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
22240205-20001970-63147465 44-46 20001970 denotes 39

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12383 47-48 -COMMA- denotes ,
T12382 46-47 -RRB- denotes ]
T12381 44-46 CD denotes 39
T12380 43-44 -LRB- denotes [
T12379 37-42 NN denotes TNF-α
T12378 34-36 IN denotes by
T12377 23-33 NN denotes p65-Thr435
T12376 20-22 IN denotes of
T12375 4-19 NN denotes phosphorylation
T12374 0-3 DT denotes the
R9624 T12375 T12374 arg1Of phosphorylation,the
R9625 T12375 T12376 arg1Of phosphorylation,of
R9626 T12375 T12378 arg1Of phosphorylation,by
R9627 T12377 T12376 arg2Of p65-Thr435,of
R9628 T12379 T12378 arg2Of TNF-α,by
R9629 T12379 T12380 arg1Of TNF-α,[
R9630 T12381 T12380 arg2Of 39,[
R9631 T12382 T12380 arg3Of ],[

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T11677 37-42 Protein denotes TNF-α
T11676 23-26 Protein denotes p65

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T12869 23-26 http://www.uniprot.org/uniprot/P21579 denotes p65
T12850 23-26 http://www.uniprot.org/uniprot/Q04206 denotes p65
T12840 37-42 http://www.uniprot.org/uniprot/P01375 denotes TNF-α
T12828 37-40 http://www.uniprot.org/uniprot/P01375 denotes TNF

GO-BP

Id Subject Object Predicate Lexical cue
T11721 4-19 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

simple1

Id Subject Object Predicate Lexical cue
T11930 37-42 Protein denotes TNF-α
T11929 23-26 Protein denotes p65

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T14240 4-19 Phosphorylation denotes phosphorylation
T14199 37-42 Protein denotes TNF-α
T14198 23-26 Protein denotes p65
R11157 T14198 T14240 themeOf p65,phosphorylation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T13841 4-19 Phosphorylation denotes phosphorylation
T13802 37-42 Protein denotes TNF-α
T13801 23-26 Protein denotes p65
R10976 T13802 T13841 themeOf TNF-α,phosphorylation

DLUT931

Id Subject Object Predicate Lexical cue
T13917 4-19 Phosphorylation denotes phosphorylation
T13877 37-42 Protein denotes TNF-α
T13876 23-26 Protein denotes p65
R10993 T13876 T13917 themeOf p65,phosphorylation
R10995 T13877 T13917 themeOf TNF-α,phosphorylation

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T14300 20-33 Protein denotes of p65-Thr435
T14395 0-48 Phosphorylation denotes the phosphorylation of p65-Thr435 by TNF-α [39],
T14371 20-33 Entity denotes of p65-Thr435
T14352 34-47 Protein denotes by TNF-α [39]
R11203 T14300 T14395 themeOf of p65-Thr435,"the phosphorylation of p65-Thr435 by TNF-α [39],"
R11212 T14352 T14395 causeOf by TNF-α [39],"the phosphorylation of p65-Thr435 by TNF-α [39],"
R11218 T14371 T14300 partOf of p65-Thr435,of p65-Thr435
R11219 T14371 T14395 siteOf of p65-Thr435,"the phosphorylation of p65-Thr435 by TNF-α [39],"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T13329 47-48 , denotes ,
T13328 46-47 NNP denotes ]
T13327 44-46 CD denotes 39
T13326 43-44 NNP denotes [
T13325 37-42 NNP denotes TNF-α
T13324 34-36 IN denotes by
T13323 23-33 NN denotes p65-Thr435
T13322 20-22 IN denotes of
T13321 4-19 NN denotes phosphorylation
T13320 0-3 DT denotes the
R10507 T13320 T13321 det the,phosphorylation
R10509 T13322 T13321 prep of,phosphorylation
R10510 T13323 T13322 pobj p65-Thr435,of
R10511 T13324 T13321 prep by,phosphorylation
R10512 T13325 T13326 compound TNF-α,[
R10513 T13326 T13328 nmod [,]
R10514 T13327 T13328 nummod 39,]
R10515 T13328 T13324 pobj ],by

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T13968 4-19 Phosphorylation denotes phosphorylation
T13967 4-19 Phosphorylation denotes phosphorylation
T13963 37-42 Protein denotes TNF-α
T13962 27-33 Protein denotes Thr435
T13961 23-26 Protein denotes p65
R11048 T13961 T13967 themeOf p65,phosphorylation
R11053 T13962 T13968 themeOf Thr435,phosphorylation

testone

Id Subject Object Predicate Lexical cue
T11386 37-42 Protein denotes TNF-α
T11385 23-26 Protein denotes p65
T11435 4-19 Phosphorylation denotes phosphorylation
R9041 T11385 T11435 themeOf p65,phosphorylation

test3

Id Subject Object Predicate Lexical cue
T11544 37-42 Protein denotes TNF-α
T11543 23-26 Protein denotes p65
T11542 4-19 Phosphorylation denotes phosphorylation
T11484 37-42 Protein denotes TNF-α
T11483 23-26 Protein denotes p65
R9096 T11543 T11542 themeOf p65,phosphorylation