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PMC:3312845 / 3-98 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T202 3-11 NN denotes necrosis
T203 12-29 JJ denotes factor-α-mediated
T204 30-39 NN denotes threonine
T205 40-43 CD denotes 435
T206 44-59 NN denotes phosphorylation
T207 60-62 IN denotes of
T208 63-66 NN denotes p65
T209 67-74 JJ denotes nuclear
T210 75-84 NN denotes factor-κB
T211 85-92 NN denotes subunit
T212 93-95 IN denotes in
R36 T203 T202 arg1Of factor-α-mediated,necrosis
R37 T206 T203 arg1Of phosphorylation,factor-α-mediated
R38 T206 T204 arg1Of phosphorylation,threonine
R39 T206 T205 arg1Of phosphorylation,435
R40 T206 T207 arg1Of phosphorylation,of
R41 T206 T212 arg1Of phosphorylation,in
R43 T211 T207 arg2Of subunit,of
R44 T211 T208 arg1Of subunit,p65
R45 T211 T209 arg1Of subunit,nuclear
R46 T211 T210 arg1Of subunit,factor-κB

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T146 63-66 Protein denotes p65

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T458 63-66 http://www.uniprot.org/uniprot/Q04206 denotes p65
T462 63-66 http://www.uniprot.org/uniprot/P21579 denotes p65

GO-BP

Id Subject Object Predicate Lexical cue
T165 3-11 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T167 3-11 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T169 44-59 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T161 3-11 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis
T163 3-11 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis

simple1

Id Subject Object Predicate Lexical cue
T186 63-66 Protein denotes p65

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T910 63-66 Protein denotes p65
T925 44-59 Phosphorylation denotes phosphorylation
R646 T910 T925 themeOf p65,phosphorylation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T766 44-59 Phosphorylation denotes phosphorylation
T767 21-29 Positive_regulation denotes mediated
T751 63-66 Protein denotes p65
R563 T766 T767 themeOf phosphorylation,mediated
R622 T751 T766 themeOf p65,phosphorylation

DLUT931

Id Subject Object Predicate Lexical cue
T793 63-66 Protein denotes p65
T808 44-59 Phosphorylation denotes phosphorylation
T810 21-29 Positive_regulation denotes mediated
R624 T793 T808 themeOf p65,phosphorylation
R633 T808 T810 themeOf phosphorylation,mediated

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T938 30-43 Entity denotes threonine 435

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T481 3-11 NN denotes necrosis
T482 12-29 JJ denotes factor-α-mediated
T483 30-39 NN denotes threonine
T484 40-43 CD denotes 435
T485 44-59 NN denotes phosphorylation
T486 60-62 IN denotes of
T487 63-66 CD denotes p65
T488 67-74 JJ denotes nuclear
T489 75-84 JJ denotes factor-κB
T490 85-92 NN denotes subunit
T491 93-95 IN denotes in
R288 T482 T483 amod factor-α-mediated,threonine
R290 T484 T485 nummod 435,phosphorylation
R291 T485 T483 appos phosphorylation,threonine
R292 T486 T485 prep of,phosphorylation
R293 T487 T490 nummod p65,subunit
R294 T488 T490 amod nuclear,subunit
R295 T489 T490 amod factor-κB,subunit
R296 T490 T486 pobj subunit,of
R297 T491 T485 prep in,phosphorylation

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T842 63-92 Protein denotes p65 nuclear factor-κB subunit
T843 44-59 Phosphorylation denotes phosphorylation
T845 21-29 Positive_regulation denotes mediated
R642 T842 T843 themeOf p65 nuclear factor-κB subunit,phosphorylation
R644 T843 T845 themeOf phosphorylation,mediated

testone

Id Subject Object Predicate Lexical cue
T18 63-66 Protein denotes p65
T33 21-29 Positive_regulation denotes mediated
T34 44-59 Phosphorylation denotes phosphorylation
R2 T18 T34 themeOf p65,phosphorylation
R11 T34 T33 themeOf phosphorylation,mediated

test3

Id Subject Object Predicate Lexical cue
T50 63-66 Protein denotes p65
T66 21-29 Positive_regulation denotes mediated
T67 44-59 Phosphorylation denotes phosphorylation
T68 63-66 Protein denotes p65
R17 T67 T66 themeOf phosphorylation,mediated
R18 T68 T67 themeOf p65,phosphorylation