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PMC:3312845 / 29577-29868 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
22240205-21029730-63147453 38-39 21029730 denotes 5
22240205-2648633-63147453 38-39 2648633 denotes 5
22240205-21742016-63147453 38-39 21742016 denotes 5
22240205-20886625-63147453 38-39 20886625 denotes 5
22240205-9530927-63147454 135-137 9530927 denotes 29

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12178 281-289 NN denotes findings
T12177 277-280 PRP-DOLLAR- denotes our
T12176 275-276 -COMMA- denotes ,
T12175 266-275 RB denotes Therefore
T12174 262-264 NN denotes PC
T12173 258-261 DT denotes the
T12172 255-257 IN denotes in
T12171 248-254 NN denotes damage
T12169 235-238 CC denotes and
T12168 229-234 NN denotes edema
T12167 219-228 JJ denotes vasogenic
T12166 208-218 JJ denotes SE-induced
T12165 200-207 VB denotes prevent
T12164 189-199 RB denotes completely
T12163 185-188 RB denotes not
T12162 179-184 MD denotes could
T12161 170-178 NN denotes infusion
T12160 162-169 NN denotes sTNFp55
T12159 160-161 -COMMA- denotes ,
T12158 155-160 NN denotes study
T12157 147-154 JJ denotes present
T12156 143-146 DT denotes the
T12155 140-142 IN denotes In
T12154 137-138 -RRB- denotes ]
T12153 135-137 CD denotes 29
T12152 134-135 -LRB- denotes [
T12151 127-133 NN denotes models
T12150 119-126 NN denotes disease
T12149 106-118 JJ denotes experimental
T12148 98-105 JJ denotes various
T12147 95-97 IN denotes in
T12146 82-94 NN denotes permeability
T12145 78-81 NN denotes BBB
T12144 68-77 VB denotes increases
T12143 58-67 NN denotes signaling
T12142 52-57 NN denotes TNF-α
T12141 50-51 -COMMA- denotes ,
T12140 44-50 RB denotes Indeed
T12139 41-42 -RRB- denotes ]
T12138 38-41 CD denotes 5-8
T12137 37-38 -LRB- denotes [
T12136 27-36 NN denotes formation
T12135 21-26 NN denotes edema
T12134 11-20 JJ denotes vasogenic
T12133 0-10 JJ denotes SE-induced
T12170 239-247 JJ denotes neuronal
R9385 T12136 T12133 arg1Of formation,SE-induced
R9386 T12136 T12134 arg1Of formation,vasogenic
R9387 T12136 T12135 arg1Of formation,edema
R9388 T12136 T12137 arg1Of formation,[
R9389 T12138 T12137 arg2Of 5-8,[
R9390 T12139 T12137 arg3Of ],[
R9391 T12143 T12142 arg1Of signaling,TNF-α
R9392 T12143 T12144 arg1Of signaling,increases
R9393 T12144 T12140 arg1Of increases,Indeed
R9394 T12144 T12141 arg1Of increases,","
R9395 T12146 T12144 arg2Of permeability,increases
R9396 T12146 T12145 arg1Of permeability,BBB
R9397 T12146 T12147 arg1Of permeability,in
R9398 T12151 T12147 arg2Of models,in
R9399 T12151 T12148 arg1Of models,various
R9400 T12151 T12149 arg1Of models,experimental
R9401 T12151 T12150 arg1Of models,disease
R9402 T12151 T12152 arg1Of models,[
R9403 T12153 T12152 arg2Of 29,[
R9404 T12154 T12152 arg3Of ],[
R9405 T12158 T12155 arg2Of study,In
R9406 T12158 T12156 arg1Of study,the
R9407 T12158 T12157 arg1Of study,present
R9408 T12161 T12160 arg1Of infusion,sTNFp55
R9409 T12161 T12162 arg1Of infusion,could
R9410 T12161 T12165 arg1Of infusion,prevent
R9411 T12165 T12155 arg1Of prevent,In
R9412 T12165 T12159 arg1Of prevent,","
R9413 T12165 T12162 arg2Of prevent,could
R9414 T12165 T12163 arg1Of prevent,not
R9415 T12165 T12164 arg1Of prevent,completely
R9416 T12167 T12166 arg1Of vasogenic,SE-induced
R9417 T12167 T12168 arg1Of vasogenic,edema
R9418 T12167 T12169 arg1Of vasogenic,and
R9419 T12170 T12169 arg2Of neuronal,and
R9420 T12171 T12165 arg2Of damage,prevent
R9421 T12171 T12167 arg1Of damage,vasogenic
R9422 T12171 T12170 arg1Of damage,neuronal
R9423 T12171 T12172 arg1Of damage,in
R9424 T12174 T12172 arg2Of PC,in
R9425 T12174 T12173 arg1Of PC,the
R9426 T12178 T12177 arg1Of findings,our

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T11670 163-169 Protein denotes TNFp55
T11669 52-57 Protein denotes TNF-α

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T12838 52-57 http://www.uniprot.org/uniprot/P01375 denotes TNF-α
T12826 52-55 http://www.uniprot.org/uniprot/P01375 denotes TNF

GO-BP

Id Subject Object Predicate Lexical cue
T11728 27-36 http://purl.obolibrary.org/obo/GO_0009058 denotes formation
T11715 58-67 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

sentences

Id Subject Object Predicate Lexical cue
T11634 140-265 Sentence denotes In the present study, sTNFp55 infusion could not completely prevent SE-induced vasogenic edema and neuronal damage in the PC.
T11633 44-139 Sentence denotes Indeed, TNF-α signaling increases BBB permeability in various experimental disease models [29].
T218 44-139 Sentence denotes Indeed, TNF-α signaling increases BBB permeability in various experimental disease models [29].
T219 140-265 Sentence denotes In the present study, sTNFp55 infusion could not completely prevent SE-induced vasogenic edema and neuronal damage in the PC.

simple1

Id Subject Object Predicate Lexical cue
T11923 163-169 Protein denotes TNFp55
T11922 52-57 Protein denotes TNF-α

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T14192 163-169 Protein denotes TNFp55
T14191 52-57 Protein denotes TNF-α

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T13795 163-169 Protein denotes TNFp55
T13794 52-57 Protein denotes TNF-α

DLUT931

Id Subject Object Predicate Lexical cue
T13870 163-169 Protein denotes TNFp55
T13869 52-57 Protein denotes TNF-α

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T14314 52-57 Protein denotes TNF-α
T14301 162-178 Entity denotes sTNFp55 infusion
T14280 258-264 Protein denotes the PC
T14261 0-10 Entity denotes SE-induced
T14405 52-67 Positive_regulation denotes TNF-α signaling
T14389 208-218 Entity denotes SE-induced
R11207 T14314 T14405 causeOf TNF-α,TNF-α signaling

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T13115 281-289 NNS denotes findings
T13114 277-280 PRP$ denotes our
T13113 275-276 , denotes ,
T13112 266-275 RB denotes Therefore
T13111 264-265 . denotes .
T13110 262-264 NN denotes PC
T13109 258-261 DT denotes the
T13108 255-257 IN denotes in
T13107 248-254 NN denotes damage
T13106 239-247 JJ denotes neuronal
T13105 235-238 CC denotes and
T13104 229-234 NN denotes edema
T13103 219-228 JJ denotes vasogenic
T13102 208-218 JJ denotes SE-induced
T13101 200-207 VB denotes prevent
T13100 189-199 RB denotes completely
T13099 185-188 RB denotes not
T13098 179-184 MD denotes could
T13097 170-178 NN denotes infusion
T13096 162-169 JJ denotes sTNFp55
T13095 160-161 , denotes ,
T13094 155-160 NN denotes study
T13093 147-154 JJ denotes present
T13092 143-146 DT denotes the
T13091 140-142 IN denotes In
T13090 138-139 . denotes .
T13089 137-138 NNP denotes ]
T13088 135-137 CD denotes 29
T13087 134-135 NNP denotes [
T13086 127-133 NNS denotes models
T13085 119-126 NN denotes disease
T13084 106-118 JJ denotes experimental
T13083 98-105 JJ denotes various
T13082 95-97 IN denotes in
T13081 82-94 NN denotes permeability
T13080 78-81 NNP denotes BBB
T13079 68-77 NNS denotes increases
T13078 58-67 VBG denotes signaling
T13077 52-57 JJ denotes TNF-α
T13076 50-51 , denotes ,
T13075 44-50 RB denotes Indeed
T13074 42-43 . denotes .
T13073 41-42 NNP denotes ]
T13072 38-41 CD denotes 5-8
T13071 37-38 NNP denotes [
T13070 27-36 NN denotes formation
T13069 21-26 NN denotes edema
T13068 11-20 JJ denotes vasogenic
T13067 0-10 JJ denotes SE-induced
R10254 T13067 T13070 amod SE-induced,formation
R10255 T13068 T13070 amod vasogenic,formation
R10256 T13069 T13070 compound edema,formation
R10258 T13071 T13073 nmod [,]
R10259 T13072 T13073 nummod 5-8,]
R10260 T13073 T13070 appos ],formation
R10262 T13075 T13078 advmod Indeed,signaling
R10263 T13076 T13078 punct ",",signaling
R10264 T13077 T13078 amod TNF-α,signaling
R10265 T13078 T13078 ROOT signaling,signaling
R10266 T13079 T13081 nmod increases,permeability
R10267 T13080 T13081 compound BBB,permeability
R10268 T13081 T13078 dobj permeability,signaling
R10269 T13082 T13081 prep in,permeability
R10270 T13083 T13086 amod various,models
R10271 T13084 T13086 amod experimental,models
R10272 T13085 T13086 compound disease,models
R10273 T13086 T13082 pobj models,in
R10274 T13087 T13089 quantmod [,]
R10275 T13088 T13089 nummod 29,]
R10276 T13089 T13078 nsubj ],signaling
R10277 T13090 T13078 punct .,signaling
R10278 T13091 T13101 prep In,prevent
R10279 T13092 T13094 det the,study
R10280 T13093 T13094 amod present,study
R10281 T13094 T13091 pobj study,In
R10282 T13095 T13101 punct ",",prevent
R10283 T13096 T13097 amod sTNFp55,infusion
R10284 T13097 T13101 nsubj infusion,prevent
R10285 T13098 T13101 aux could,prevent
R10286 T13099 T13101 neg not,prevent
R10287 T13100 T13101 advmod completely,prevent
R10288 T13101 T13101 ROOT prevent,prevent
R10289 T13102 T13104 nmod SE-induced,edema
R10290 T13103 T13104 amod vasogenic,edema
R10291 T13104 T13101 dobj edema,prevent
R10292 T13105 T13104 cc and,edema
R10293 T13106 T13107 amod neuronal,damage
R10294 T13107 T13104 conj damage,edema
R10295 T13108 T13107 prep in,damage
R10296 T13109 T13110 det the,PC
R10297 T13110 T13108 pobj PC,in
R10298 T13111 T13101 punct .,prevent
R10301 T13114 T13115 poss our,findings

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T13951 162-169 Protein denotes sTNFp55
T13950 52-57 Protein denotes TNF-α

testone

Id Subject Object Predicate Lexical cue
T11379 163-169 Protein denotes TNFp55
T11378 52-57 Protein denotes TNF-α

test3

Id Subject Object Predicate Lexical cue
T11531 162-169 Protein denotes sTNFp55
T11530 52-57 Protein denotes TNF-α
T11477 163-169 Protein denotes TNFp55
T11476 52-57 Protein denotes TNF-α