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PMC:3312845 / 25773-26154 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T16382 375-376 -RRB- denotes )
T16381 374-375 NN denotes D
T16380 373-374 -LRB- denotes (
T16379 369-372 FW denotes μm.
T16378 367-368 -RRB- denotes )
T16377 366-367 NN denotes B
T16376 365-366 -LRB- denotes (
T16375 361-364 CD denotes 150
T16374 357-360 CC denotes and
T16373 355-356 -RRB- denotes )
T16372 354-355 NN denotes C
T16371 350-353 CC denotes and
T16370 348-349 NN denotes A
T16369 347-348 -LRB- denotes (
T16368 342-346 CD denotes 12.5
T16367 340-341 SYM denotes =
T16366 335-339 NN denotes Bars
T16365 332-333 -RRB- denotes )
T16364 326-332 NN denotes arrows
T16363 325-326 -LRB- denotes (
T16362 319-324 NN denotes MIP-2
T16361 316-318 IN denotes of
T16360 305-315 NN denotes expression
T16359 294-304 JJ denotes Astroglial
T16358 292-293 -RRB- denotes )
T16357 291-292 NN denotes C
T16356 290-291 -LRB- denotes (
T16355 286-289 FW denotes SE.
T16354 280-285 IN denotes after
T16353 276-279 NN denotes day
T16352 274-275 CD denotes 1
T16351 271-273 NN denotes PC
T16350 267-270 DT denotes the
T16349 264-266 IN denotes in
T16348 253-263 NN denotes expression
T16347 247-252 NN denotes MIP-2
T16346 245-246 -RRB- denotes )
T16345 244-245 NN denotes B
T16344 243-244 -LRB- denotes (
T16343 239-242 FW denotes SE.
T16342 233-238 IN denotes after
T16341 229-232 NN denotes day
T16340 227-228 CD denotes 1
T16339 220-226 NN denotes lesion
T16338 214-219 NN denotes edema
T16337 204-213 JJ denotes vasogenic
T16336 201-203 IN denotes in
T16335 188-200 NN denotes infiltration
T16334 177-187 NN denotes Neutrophil
T16333 175-176 -RRB- denotes )
T16332 174-175 NN denotes A
T16331 173-174 -LRB- denotes (
T16330 169-172 FW denotes SE.
T16329 159-168 VB denotes following
T16328 148-158 NN denotes expression
T16327 142-147 NN denotes MIP-2
T16326 138-141 CC denotes and
T16325 125-137 NN denotes infiltration
T16324 114-124 NN denotes neutrophil
T16323 111-113 IN denotes on
T16322 102-110 NN denotes infusion
T16321 93-101 NN denotes sTNFp55R
T16320 90-92 IN denotes of
T16319 83-89 NN denotes Effect
T10101 62-71 NN denotes formation
T10100 56-61 NN denotes edema
T10099 46-55 JJ denotes vasogenic
T10098 31-45 JJ denotes TNF-α-mediated
T10097 28-30 TO denotes to
T10096 17-27 VB denotes correlated
T10095 14-16 VB denotes be
T10094 10-13 MD denotes may
T10093 7-9 NN denotes PC
T10092 3-6 DT denotes the
R8183 T10093 T10092 arg1Of PC,the
R8186 T10096 T10094 arg2Of correlated,may
R8187 T10096 T10095 arg2Of correlated,be
R8188 T10096 T10097 arg1Of correlated,to
R8189 T10101 T10097 arg2Of formation,to
R8190 T10101 T10098 arg1Of formation,TNF-α-mediated
R8191 T10101 T10099 arg1Of formation,vasogenic
R8192 T10101 T10100 arg1Of formation,edema
R12404 T16319 T16320 arg1Of Effect,of
R12405 T16319 T16323 arg1Of Effect,on
R12406 T16319 T16329 arg1Of Effect,following
R12407 T16319 T16349 arg1Of Effect,in
R12408 T16322 T16320 arg2Of infusion,of
R12409 T16322 T16321 arg1Of infusion,sTNFp55R
R12410 T16325 T16324 arg1Of infiltration,neutrophil
R12411 T16325 T16326 arg1Of infiltration,and
R12412 T16326 T16323 arg2Of and,on
R12413 T16328 T16326 arg2Of expression,and
R12414 T16328 T16327 arg1Of expression,MIP-2
R12415 T16332 T16331 arg2Of A,(
R12416 T16333 T16331 arg3Of ),(
R12417 T16335 T16329 arg2Of infiltration,following
R12418 T16335 T16330 arg1Of infiltration,SE.
R12419 T16335 T16331 arg1Of infiltration,(
R12420 T16335 T16334 arg1Of infiltration,Neutrophil
R12421 T16335 T16336 arg1Of infiltration,in
R12422 T16339 T16336 arg2Of lesion,in
R12423 T16339 T16337 arg1Of lesion,vasogenic
R12424 T16339 T16338 arg1Of lesion,edema
R12425 T16339 T16342 arg1Of lesion,after
R12426 T16341 T16340 arg1Of day,1
R12427 T16342 T16341 arg1Of after,day
R12428 T16345 T16344 arg2Of B,(
R12429 T16346 T16344 arg3Of ),(
R12430 T16348 T16342 arg2Of expression,after
R12431 T16348 T16343 arg1Of expression,SE.
R12432 T16348 T16344 arg1Of expression,(
R12433 T16348 T16347 arg1Of expression,MIP-2
R12434 T16349 T16354 arg1Of in,after
R12435 T16353 T16350 arg1Of day,the
R12436 T16353 T16351 arg1Of day,PC
R12437 T16353 T16352 arg1Of day,1
R12438 T16354 T16353 arg1Of after,day
R12439 T16355 T16354 arg2Of SE.,after
R12440 T16357 T16356 arg2Of C,(
R12441 T16358 T16356 arg3Of ),(
R12442 T16360 T16349 arg2Of expression,in
R12443 T16360 T16356 arg1Of expression,(
R12444 T16360 T16359 arg1Of expression,Astroglial
R12445 T16360 T16361 arg1Of expression,of
R12446 T16362 T16361 arg2Of MIP-2,of
R12447 T16362 T16363 arg1Of MIP-2,(
R12448 T16364 T16363 arg2Of arrows,(
R12449 T16365 T16363 arg3Of ),(
R12451 T16368 T16369 arg1Of 12.5,(
R12452 T16368 T16374 arg1Of 12.5,and
R12453 T16370 T16371 arg1Of A,and
R12454 T16371 T16369 arg2Of and,(
R12455 T16372 T16371 arg2Of C,and
R12456 T16373 T16369 arg3Of ),(
R12457 T16375 T16374 arg2Of 150,and
R12458 T16375 T16376 arg1Of 150,(
R12459 T16377 T16376 arg2Of B,(
R12460 T16378 T16376 arg3Of ),(
R12461 T16379 T16368 arg1Of μm.,12.5
R12462 T16379 T16375 arg1Of μm.,150
R12463 T16381 T16380 arg2Of D,(
R12464 T16382 T16380 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T16303 319-324 Protein denotes MIP-2
T16302 247-252 Protein denotes MIP-2
T16301 142-147 Protein denotes MIP-2
T16300 94-101 Protein denotes TNFp55R
T9896 31-36 Protein denotes TNF-α

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T10102 31-36 http://www.uniprot.org/uniprot/P01375 denotes TNF-α
T16513 319-324 http://www.uniprot.org/uniprot/P10889 denotes MIP-2
T16512 247-252 http://www.uniprot.org/uniprot/P10889 denotes MIP-2
T16511 142-147 http://www.uniprot.org/uniprot/P10889 denotes MIP-2

GO-BP

Id Subject Object Predicate Lexical cue
T9898 62-71 http://purl.obolibrary.org/obo/GO_0009058 denotes formation

sentences

Id Subject Object Predicate Lexical cue
T16281 83-334 Sentence denotes Effect of sTNFp55R infusion on neutrophil infiltration and MIP-2 expression following SE. (A) Neutrophil infiltration in vasogenic edema lesion 1 day after SE. (B) MIP-2 expression in the PC 1 day after SE. (C) Astroglial expression of MIP-2 (arrows).
T196 73-334 Sentence denotes Figure 6 Effect of sTNFp55R infusion on neutrophil infiltration and MIP-2 expression following SE. (A) Neutrophil infiltration in vasogenic edema lesion 1 day after SE. (B) MIP-2 expression in the PC 1 day after SE. (C) Astroglial expression of MIP-2 (arrows).

simple1

Id Subject Object Predicate Lexical cue
T16314 319-324 Protein denotes MIP-2
T16313 247-252 Protein denotes MIP-2
T16312 142-147 Protein denotes MIP-2
T16311 94-101 Protein denotes TNFp55R
T9903 31-36 Protein denotes TNF-α

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T16779 142-147 Protein denotes MIP-2
T16789 305-315 Gene_expression denotes expression
T16788 253-263 Gene_expression denotes expression
T16787 148-158 Gene_expression denotes expression
T16786 83-89 Regulation denotes Effect
T16781 319-324 Protein denotes MIP-2
T16780 247-252 Protein denotes MIP-2
T10340 31-36 Protein denotes TNF-α
T16778 94-101 Protein denotes TNFp55R
R12817 T16778 T16786 themeOf TNFp55R,Effect
R12818 T16779 T16787 themeOf MIP-2,expression
R12819 T16780 T16788 themeOf MIP-2,expression
R12820 T16781 T16789 themeOf MIP-2,expression
R12822 T16787 T16786 themeOf expression,Effect

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T16732 305-315 Gene_expression denotes expression
T16731 253-263 Gene_expression denotes expression
T16730 83-89 Regulation denotes Effect
T16729 148-158 Gene_expression denotes expression
T16724 319-324 Protein denotes MIP-2
T16723 247-252 Protein denotes MIP-2
T16722 142-147 Protein denotes MIP-2
T16721 94-101 Protein denotes TNFp55R
T10313 31-36 Protein denotes TNF-α
R12797 T16722 T16729 themeOf MIP-2,expression
R12798 T16723 T16731 themeOf MIP-2,expression
R12799 T16724 T16732 themeOf MIP-2,expression
R12801 T16729 T16730 themeOf expression,Effect

DLUT931

Id Subject Object Predicate Lexical cue
T16745 305-315 Gene_expression denotes expression
T16744 253-263 Gene_expression denotes expression
T16743 83-89 Regulation denotes Effect
T16742 148-158 Gene_expression denotes expression
T16737 319-324 Protein denotes MIP-2
T16736 247-252 Protein denotes MIP-2
T16735 142-147 Protein denotes MIP-2
T16734 94-101 Protein denotes TNFp55R
T10318 37-45 Positive_regulation denotes mediated
T10317 31-36 Protein denotes TNF-α
R8400 T10317 T10318 themeOf TNF-α,mediated
R12802 T16735 T16742 themeOf MIP-2,expression
R12803 T16736 T16744 themeOf MIP-2,expression
R12804 T16737 T16745 themeOf MIP-2,expression
R12808 T16742 T16743 themeOf expression,Effect

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T16816 142-158 Gene_expression denotes MIP-2 expression
T16815 247-288 Gene_expression denotes MIP-2 expression in the PC 1 day after SE
T16814 114-124 Entity denotes neutrophil
T16809 94-97 Protein denotes TNF
T16807 247-252 Protein denotes MIP-2
T16805 294-333 Protein denotes Astroglial expression of MIP-2 (arrows)
T16804 239-241 Entity denotes SE
T16803 286-288 Protein denotes SE
T16802 177-187 Entity denotes Neutrophil
T16800 142-147 Protein denotes MIP-2
T16799 267-279 Protein denotes the PC 1 day
T16797 94-171 Entity denotes TNFp55R infusion on neutrophil infiltration and MIP-2 expression following SE
T16793 169-171 Protein denotes SE
T10363 28-71 Regulation denotes to TNF-α-mediated vasogenic edema formation
T10354 3-9 Protein denotes the PC
T10353 31-45 Protein denotes TNF-α-mediated
R8401 T10353 T10363 causeOf TNF-α-mediated,to TNF-α-mediated vasogenic edema formation
R12823 T16800 T16816 themeOf MIP-2,MIP-2 expression
R12824 T16807 T16815 themeOf MIP-2,MIP-2 expression in the PC 1 day after SE

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T16585 375-376 -RRB- denotes )
T16584 374-375 NNP denotes D
T16583 373-374 -LRB- denotes (
T16582 371-372 . denotes .
T16581 369-371 NN denotes μm
T16580 367-368 -RRB- denotes )
T16579 366-367 NN denotes B
T16578 365-366 -LRB- denotes (
T16577 361-364 CD denotes 150
T16576 357-360 CC denotes and
T16575 355-356 -RRB- denotes )
T16574 354-355 NNP denotes C
T16573 350-353 CC denotes and
T16572 348-349 DT denotes A
T16571 347-348 -LRB- denotes (
T16570 342-346 CD denotes 12.5
T16569 340-341 SYM denotes =
T16568 335-339 NNS denotes Bars
T16567 333-334 . denotes .
T16566 332-333 -RRB- denotes )
T16565 326-332 NNS denotes arrows
T16564 325-326 -LRB- denotes (
T16527 159-168 VBG denotes following
T16526 148-158 NN denotes expression
T16525 142-147 NN denotes MIP-2
T16524 138-141 CC denotes and
T16523 125-137 NN denotes infiltration
T16522 114-124 NN denotes neutrophil
T16521 111-113 IN denotes on
T16520 102-110 NN denotes infusion
T16519 93-101 JJ denotes sTNFp55R
T16518 90-92 IN denotes of
T16517 83-89 NN denotes Effect
T16563 319-324 NNP denotes MIP-2
T16562 316-318 IN denotes of
T16561 305-315 NN denotes expression
T16560 294-304 NNP denotes Astroglial
T16559 292-293 -RRB- denotes )
T16558 291-292 NNP denotes C
T16557 290-291 -LRB- denotes (
T16556 288-289 . denotes .
T16555 286-288 NNP denotes SE
T16554 280-285 IN denotes after
T16553 276-279 NN denotes day
T16552 274-275 CD denotes 1
T16551 271-273 NN denotes PC
T16550 267-270 DT denotes the
T16549 264-266 IN denotes in
T16548 253-263 NN denotes expression
T16547 247-252 NNP denotes MIP-2
T16546 245-246 -RRB- denotes )
T16545 244-245 NNP denotes B
T16544 243-244 -LRB- denotes (
T16543 241-242 . denotes .
T16542 239-241 NNP denotes SE
T16541 233-238 IN denotes after
T16540 229-232 NN denotes day
T16539 227-228 CD denotes 1
T16538 220-226 NN denotes lesion
T16537 214-219 NN denotes edema
T16536 204-213 JJ denotes vasogenic
T16535 201-203 IN denotes in
T16534 188-200 NN denotes infiltration
T16533 177-187 NNP denotes Neutrophil
T16532 175-176 -RRB- denotes )
T16531 174-175 NNP denotes A
T16530 173-174 -LRB- denotes (
T16529 171-172 . denotes .
T16528 169-171 NNP denotes SE
T10309 71-72 . denotes .
T10308 62-71 NN denotes formation
T10307 56-61 NN denotes edema
T10306 46-55 JJ denotes vasogenic
T10305 31-45 JJ denotes TNF-α-mediated
T10304 28-30 TO denotes to
T10303 17-27 VBN denotes correlated
T10302 14-16 VB denotes be
T10301 10-13 MD denotes may
T10300 7-9 NN denotes PC
T10299 3-6 DT denotes the
R8389 T10299 T10300 det the,PC
R8391 T10301 T10303 aux may,correlated
R8392 T10302 T10303 auxpass be,correlated
R8394 T10304 T10303 prep to,correlated
R8395 T10305 T10308 amod TNF-α-mediated,formation
R8396 T10306 T10308 amod vasogenic,formation
R8397 T10307 T10308 compound edema,formation
R8398 T10308 T10304 pobj formation,to
R12600 T16524 T16523 cc and,infiltration
R12601 T16525 T16526 compound MIP-2,expression
R12602 T16526 T16523 conj expression,infiltration
R12603 T16527 T16517 prep following,Effect
R12604 T16528 T16527 dobj SE,following
R12605 T16529 T16517 punct .,Effect
R12606 T16530 T16534 punct (,infiltration
R12607 T16531 T16534 det A,infiltration
R12608 T16532 T16533 punct ),Neutrophil
R12609 T16533 T16534 compound Neutrophil,infiltration
R12610 T16534 T16534 ROOT infiltration,infiltration
R12611 T16535 T16534 prep in,infiltration
R12612 T16536 T16538 amod vasogenic,lesion
R12613 T16537 T16538 compound edema,lesion
R12614 T16538 T16535 pobj lesion,in
R12615 T16539 T16540 nummod 1,day
R12616 T16540 T16541 npadvmod day,after
R12617 T16541 T16534 prep after,infiltration
R12618 T16542 T16541 pobj SE,after
R12619 T16543 T16534 punct .,infiltration
R12620 T16544 T16548 punct (,expression
R12621 T16545 T16548 nmod B,expression
R12622 T16546 T16545 punct ),B
R12623 T16547 T16548 compound MIP-2,expression
R12624 T16548 T16548 ROOT expression,expression
R12625 T16549 T16548 prep in,expression
R12626 T16550 T16553 det the,day
R12627 T16551 T16553 nmod PC,day
R12628 T16552 T16553 nummod 1,day
R12629 T16553 T16549 pobj day,in
R12630 T16554 T16553 prep after,day
R12631 T16555 T16554 pobj SE,after
R12632 T16556 T16548 punct .,expression
R12633 T16557 T16561 punct (,expression
R12634 T16558 T16561 nmod C,expression
R12635 T16559 T16558 punct ),C
R12636 T16560 T16561 compound Astroglial,expression
R12637 T16561 T16561 ROOT expression,expression
R12638 T16562 T16561 prep of,expression
R12639 T16563 T16562 pobj MIP-2,of
R12640 T16564 T16565 punct (,arrows
R12641 T16565 T16561 appos arrows,expression
R12642 T16566 T16565 punct ),arrows
R12643 T16567 T16561 punct .,expression
R12644 T16568 T16568 ROOT Bars,Bars
R12645 T16569 T16570 punct =,12.5
R12646 T16570 T16568 nummod 12.5,Bars
R12647 T16571 T16572 punct (,A
R12648 T16572 T16568 appos A,Bars
R12649 T16573 T16572 cc and,A
R12650 T16574 T16572 conj C,A
R12651 T16575 T16574 punct ),C
R12652 T16576 T16574 cc and,C
R12653 T16577 T16579 nummod 150,B
R12654 T16578 T16579 punct (,B
R12655 T16579 T16581 compound B,μm
R12656 T16580 T16581 punct ),μm
R12657 T16581 T16574 conj μm,C
R12658 T16582 T16568 punct .,Bars
R12659 T16583 T16584 punct (,D
R12660 T16584 T16584 ROOT D,D
R12661 T16585 T16584 punct ),D
R12593 T16517 T16517 ROOT Effect,Effect
R12594 T16518 T16517 prep of,Effect
R12595 T16519 T16520 amod sTNFp55R,infusion
R12596 T16520 T16518 pobj infusion,of
R12597 T16521 T16520 prep on,infusion
R12598 T16522 T16523 compound neutrophil,infiltration
R12599 T16523 T16521 pobj infiltration,on

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T16771 253-263 Gene_expression denotes expression
T16770 271-275 Protein denotes PC 1
T16769 83-89 Regulation denotes Effect
T16768 93-101 Protein denotes sTNFp55R
T10329 31-36 Protein denotes TNF-α
R12813 T16768 T16769 themeOf sTNFp55R,Effect
R12814 T16770 T16771 themeOf PC 1,expression

testone

Id Subject Object Predicate Lexical cue
T16254 305-315 Gene_expression denotes expression
T16253 253-263 Gene_expression denotes expression
T16252 159-168 Positive_regulation denotes following
T16251 148-158 Gene_expression denotes expression
T16246 319-324 Protein denotes MIP-2
T16245 247-252 Protein denotes MIP-2
T16244 142-147 Protein denotes MIP-2
T16243 94-101 Protein denotes TNFp55R
T9870 31-36 Protein denotes TNF-α
R12383 T16244 T16251 themeOf MIP-2,expression
R12384 T16245 T16253 themeOf MIP-2,expression
R12385 T16246 T16254 themeOf MIP-2,expression
R12389 T16251 T16252 themeOf expression,following

test3

Id Subject Object Predicate Lexical cue
T16273 319-324 Protein denotes MIP-2
T16272 305-315 Gene_expression denotes expression
T16271 253-263 Gene_expression denotes expression
T16270 247-252 Protein denotes MIP-2
T16269 159-168 Positive_regulation denotes following
T16268 148-158 Gene_expression denotes expression
T16267 142-147 Protein denotes MIP-2
T16266 93-101 Protein denotes sTNFp55R
T16261 319-324 Protein denotes MIP-2
T16260 247-252 Protein denotes MIP-2
T16259 142-147 Protein denotes MIP-2
T16258 94-101 Protein denotes TNFp55R
T9878 31-36 Protein denotes TNF-α
T9874 31-36 Protein denotes TNF-α
R12390 T16267 T16268 themeOf MIP-2,expression
R12391 T16270 T16271 themeOf MIP-2,expression
R12392 T16273 T16272 themeOf MIP-2,expression