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PMC:3312845 / 24134-24230 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T9544 94-95 -RRB- denotes )
T9543 90-94 NN denotes 5C-D
T9542 82-89 NN denotes Figures
T9541 81-82 -LRB- denotes (
T9540 65-80 NN denotes phosphorylation
T9539 54-64 NN denotes p65-Thr435
T9538 44-53 VB denotes increased
T9537 41-43 IN denotes by
T9536 29-40 VB denotes accompanied
T9535 25-28 VB denotes was
T9534 18-24 NN denotes SMI-71
T9533 15-17 IN denotes in
T9532 5-14 NN denotes reduction
T9531 0-4 DT denotes This
R7718 T9532 T9531 arg1Of reduction,This
R7719 T9532 T9533 arg1Of reduction,in
R7720 T9532 T9535 arg1Of reduction,was
R7721 T9532 T9536 arg2Of reduction,accompanied
R7722 T9534 T9533 arg2Of SMI-71,in
R7723 T9536 T9535 arg2Of accompanied,was
R7724 T9540 T9536 arg1Of phosphorylation,accompanied
R7725 T9540 T9537 arg2Of phosphorylation,by
R7726 T9540 T9538 arg2Of phosphorylation,increased
R7727 T9540 T9539 arg1Of phosphorylation,p65-Thr435
R7728 T9540 T9541 arg1Of phosphorylation,(
R7729 T9543 T9541 arg2Of 5C-D,(
R7730 T9543 T9542 arg1Of 5C-D,Figures
R7731 T9544 T9541 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T9422 54-57 Protein denotes p65

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T9613 54-57 http://www.uniprot.org/uniprot/P21579 denotes p65
T9610 54-57 http://www.uniprot.org/uniprot/Q04206 denotes p65

GO-BP

Id Subject Object Predicate Lexical cue
T9426 65-80 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

sentences

Id Subject Object Predicate Lexical cue
T9407 0-96 Sentence denotes This reduction in SMI-71 was accompanied by increased p65-Thr435 phosphorylation (Figures 5C-D).
T184 0-96 Sentence denotes This reduction in SMI-71 was accompanied by increased p65-Thr435 phosphorylation (Figures 5C-D).

simple1

Id Subject Object Predicate Lexical cue
T9448 54-57 Protein denotes p65

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T9830 44-53 Positive_regulation denotes increased
T9829 65-80 Phosphorylation denotes phosphorylation
T9825 54-57 Protein denotes p65
R7985 T9825 T9829 themeOf p65,phosphorylation
R7986 T9825 T9830 themeOf p65,increased
R7989 T9829 T9830 themeOf phosphorylation,increased

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T9785 65-80 Phosphorylation denotes phosphorylation
T9784 44-53 Positive_regulation denotes increased
T9780 54-57 Protein denotes p65
R7960 T9780 T9785 themeOf p65,phosphorylation
R7961 T9780 T9784 themeOf p65,increased
R7965 T9785 T9784 themeOf phosphorylation,increased

DLUT931

Id Subject Object Predicate Lexical cue
T9795 44-53 Positive_regulation denotes increased
T9794 65-80 Phosphorylation denotes phosphorylation
T9790 54-57 Protein denotes p65
R7967 T9790 T9794 themeOf p65,phosphorylation
R7970 T9794 T9795 themeOf phosphorylation,increased

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T9854 44-95 Phosphorylation denotes increased p65-Thr435 phosphorylation (Figures 5C-D)
T9853 44-95 Positive_regulation denotes increased p65-Thr435 phosphorylation (Figures 5C-D)
T9848 54-64 Protein denotes p65-Thr435
T9843 54-64 Entity denotes p65-Thr435
R7994 T9843 T9848 partOf p65-Thr435,p65-Thr435
R7995 T9843 T9854 siteOf p65-Thr435,increased p65-Thr435 phosphorylation (Figures 5C-D)
R7996 T9848 T9854 themeOf p65-Thr435,increased p65-Thr435 phosphorylation (Figures 5C-D)
R7997 T9854 T9853 themeOf increased p65-Thr435 phosphorylation (Figures 5C-D),increased p65-Thr435 phosphorylation (Figures 5C-D)

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T9712 95-96 . denotes .
T9711 94-95 -RRB- denotes )
T9710 90-94 NN denotes 5C-D
T9709 82-89 NNS denotes Figures
T9708 81-82 -LRB- denotes (
T9707 65-80 NN denotes phosphorylation
T9706 54-64 NN denotes p65-Thr435
T9705 44-53 VBN denotes increased
T9704 41-43 IN denotes by
T9703 29-40 VBN denotes accompanied
T9702 25-28 VBD denotes was
T9701 18-24 NN denotes SMI-71
T9700 15-17 IN denotes in
T9699 5-14 NN denotes reduction
T9698 0-4 DT denotes This
R7878 T9698 T9699 det This,reduction
R7879 T9699 T9703 nsubjpass reduction,accompanied
R7880 T9700 T9699 prep in,reduction
R7881 T9701 T9700 pobj SMI-71,in
R7882 T9702 T9703 auxpass was,accompanied
R7883 T9703 T9703 ROOT accompanied,accompanied
R7884 T9704 T9703 agent by,accompanied
R7885 T9705 T9707 amod increased,phosphorylation
R7886 T9706 T9707 compound p65-Thr435,phosphorylation
R7887 T9707 T9704 pobj phosphorylation,by
R7888 T9708 T9710 punct (,5C-D
R7889 T9709 T9710 compound Figures,5C-D
R7890 T9710 T9707 appos 5C-D,phosphorylation
R7891 T9711 T9710 punct ),5C-D
R7892 T9712 T9703 punct .,accompanied

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T9437 44-53 Positive_regulation denotes increased
T9436 44-53 Positive_regulation denotes increased
T9435 65-80 Phosphorylation denotes phosphorylation
T9434 65-80 Phosphorylation denotes phosphorylation
T9433 58-64 Protein denotes Thr435
T9432 54-57 Protein denotes p65
R7633 T9432 T9434 themeOf p65,phosphorylation
R7634 T9433 T9435 themeOf Thr435,phosphorylation
R7635 T9434 T9436 themeOf phosphorylation,increased
R7636 T9435 T9437 themeOf phosphorylation,increased

testone

Id Subject Object Predicate Lexical cue
T9384 65-80 Phosphorylation denotes phosphorylation
T9383 44-53 Positive_regulation denotes increased
T9382 5-14 Negative_regulation denotes reduction
T9375 54-57 Protein denotes p65
R7612 T9375 T9384 themeOf p65,phosphorylation
R7615 T9384 T9383 themeOf phosphorylation,increased

test3

Id Subject Object Predicate Lexical cue
T9396 65-80 Phosphorylation denotes phosphorylation
T9395 54-57 Protein denotes p65
T9394 44-53 Positive_regulation denotes increased
T9389 54-57 Protein denotes p65
R7617 T9395 T9396 themeOf p65,phosphorylation
R7618 T9396 T9394 themeOf phosphorylation,increased