PMC:3312845 / 23320-23554 JSONTXT

Annnotations TAB JSON ListView MergeView

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T15826","span":{"begin":214,"end":221},"obj":"Protein"},{"id":"T15825","span":{"begin":174,"end":181},"obj":"Protein"},{"id":"T15824","span":{"begin":143,"end":146},"obj":"Protein"},{"id":"T15823","span":{"begin":81,"end":87},"obj":"Protein"},{"id":"T15822","span":{"begin":3,"end":6},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"E. p65-Thr435 phosphorylation is enhanced, while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows). (F-G) Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE. sTNFp55R infusion eff"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T15879","span":{"begin":143,"end":146},"obj":"http://www.uniprot.org/uniprot/P21579"},{"id":"T15878","span":{"begin":3,"end":6},"obj":"http://www.uniprot.org/uniprot/P21579"},{"id":"T15871","span":{"begin":143,"end":146},"obj":"http://www.uniprot.org/uniprot/Q04206"},{"id":"T15870","span":{"begin":3,"end":6},"obj":"http://www.uniprot.org/uniprot/Q04206"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"E. p65-Thr435 phosphorylation is enhanced, while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows). (F-G) Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE. sTNFp55R infusion eff"}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T15835","span":{"begin":154,"end":169},"obj":"http://purl.obolibrary.org/obo/GO_0016310"},{"id":"T15834","span":{"begin":14,"end":29},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"text":"E. p65-Thr435 phosphorylation is enhanced, while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows). (F-G) Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE. sTNFp55R infusion eff"}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T15837","span":{"begin":109,"end":114},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"E. p65-Thr435 phosphorylation is enhanced, while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows). (F-G) Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE. sTNFp55R infusion eff"}

    simple1

    {"project":"simple1","denotations":[{"id":"T15850","span":{"begin":214,"end":221},"obj":"Protein"},{"id":"T15849","span":{"begin":174,"end":181},"obj":"Protein"},{"id":"T15848","span":{"begin":143,"end":146},"obj":"Protein"},{"id":"T15847","span":{"begin":81,"end":87},"obj":"Protein"},{"id":"T15846","span":{"begin":3,"end":6},"obj":"Protein"}],"text":"E. p65-Thr435 phosphorylation is enhanced, while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows). (F-G) Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE. sTNFp55R infusion eff"}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T16175","span":{"begin":154,"end":169},"obj":"Phosphorylation"},{"id":"T16161","span":{"begin":143,"end":146},"obj":"Protein"},{"id":"T16160","span":{"begin":81,"end":87},"obj":"Protein"},{"id":"T16159","span":{"begin":3,"end":6},"obj":"Protein"},{"id":"T16174","span":{"begin":88,"end":96},"obj":"Gene_expression"},{"id":"T16173","span":{"begin":33,"end":41},"obj":"Positive_regulation"},{"id":"T16171","span":{"begin":14,"end":29},"obj":"Phosphorylation"},{"id":"T16163","span":{"begin":214,"end":221},"obj":"Protein"},{"id":"T16162","span":{"begin":174,"end":181},"obj":"Protein"}],"relations":[{"id":"R12358","pred":"themeOf","subj":"T16160","obj":"T16174"},{"id":"R12359","pred":"themeOf","subj":"T16161","obj":"T16175"},{"id":"R12357","pred":"themeOf","subj":"T16159","obj":"T16171"}],"text":"E. p65-Thr435 phosphorylation is enhanced, while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows). (F-G) Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE. sTNFp55R infusion eff"}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T16044","span":{"begin":154,"end":169},"obj":"Phosphorylation"},{"id":"T16041","span":{"begin":88,"end":96},"obj":"Gene_expression"},{"id":"T16040","span":{"begin":33,"end":41},"obj":"Positive_regulation"},{"id":"T16038","span":{"begin":14,"end":29},"obj":"Phosphorylation"},{"id":"T16031","span":{"begin":214,"end":221},"obj":"Protein"},{"id":"T16030","span":{"begin":174,"end":181},"obj":"Protein"},{"id":"T16029","span":{"begin":143,"end":146},"obj":"Protein"},{"id":"T16028","span":{"begin":81,"end":87},"obj":"Protein"},{"id":"T16027","span":{"begin":3,"end":6},"obj":"Protein"}],"relations":[{"id":"R12293","pred":"themeOf","subj":"T16027","obj":"T16038"},{"id":"R12294","pred":"themeOf","subj":"T16028","obj":"T16041"},{"id":"R12295","pred":"themeOf","subj":"T16029","obj":"T16044"}],"text":"E. p65-Thr435 phosphorylation is enhanced, while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows). (F-G) Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE. sTNFp55R infusion eff"}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T16069","span":{"begin":182,"end":189},"obj":"Positive_regulation"},{"id":"T16068","span":{"begin":154,"end":169},"obj":"Phosphorylation"},{"id":"T16067","span":{"begin":88,"end":96},"obj":"Gene_expression"},{"id":"T16066","span":{"begin":33,"end":41},"obj":"Positive_regulation"},{"id":"T16065","span":{"begin":14,"end":29},"obj":"Phosphorylation"},{"id":"T16056","span":{"begin":214,"end":221},"obj":"Protein"},{"id":"T16055","span":{"begin":174,"end":181},"obj":"Protein"},{"id":"T16054","span":{"begin":143,"end":146},"obj":"Protein"},{"id":"T16053","span":{"begin":81,"end":87},"obj":"Protein"},{"id":"T16052","span":{"begin":3,"end":6},"obj":"Protein"}],"relations":[{"id":"R12304","pred":"themeOf","subj":"T16052","obj":"T16065"},{"id":"R12305","pred":"themeOf","subj":"T16053","obj":"T16067"},{"id":"R12306","pred":"themeOf","subj":"T16054","obj":"T16068"},{"id":"R12307","pred":"themeOf","subj":"T16055","obj":"T16069"}],"text":"E. p65-Thr435 phosphorylation is enhanced, while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows). (F-G) Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE. sTNFp55R infusion eff"}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T16220","span":{"begin":43,"end":123},"obj":"Negative_regulation"},{"id":"T16216","span":{"begin":3,"end":29},"obj":"Phosphorylation"},{"id":"T16214","span":{"begin":131,"end":211},"obj":"Phosphorylation"},{"id":"T16213","span":{"begin":3,"end":41},"obj":"Positive_regulation"},{"id":"T16210","span":{"begin":88,"end":114},"obj":"Entity"},{"id":"T16201","span":{"begin":143,"end":153},"obj":"Entity"},{"id":"T16199","span":{"begin":3,"end":13},"obj":"Protein"},{"id":"T16196","span":{"begin":3,"end":13},"obj":"Entity"},{"id":"T16195","span":{"begin":173,"end":211},"obj":"Entity"},{"id":"T16194","span":{"begin":143,"end":153},"obj":"Protein"},{"id":"T16192","span":{"begin":222,"end":230},"obj":"Entity"},{"id":"T16190","span":{"begin":81,"end":87},"obj":"Protein"},{"id":"T16188","span":{"begin":214,"end":221},"obj":"Protein"},{"id":"T16185","span":{"begin":214,"end":221},"obj":"Entity"}],"relations":[{"id":"R12369","pred":"themeOf","subj":"T16194","obj":"T16214"},{"id":"R12370","pred":"partOf","subj":"T16196","obj":"T16199"},{"id":"R12371","pred":"siteOf","subj":"T16196","obj":"T16216"},{"id":"R12373","pred":"themeOf","subj":"T16199","obj":"T16216"},{"id":"R12374","pred":"partOf","subj":"T16201","obj":"T16194"},{"id":"R12375","pred":"siteOf","subj":"T16201","obj":"T16214"},{"id":"R12382","pred":"themeOf","subj":"T16216","obj":"T16213"}],"text":"E. p65-Thr435 phosphorylation is enhanced, while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows). (F-G) Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE. sTNFp55R infusion eff"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T15977","span":{"begin":222,"end":230},"obj":"NN"},{"id":"T15976","span":{"begin":213,"end":221},"obj":"JJ"},{"id":"T15975","span":{"begin":211,"end":212},"obj":"."},{"id":"T15974","span":{"begin":209,"end":211},"obj":"NNP"},{"id":"T15973","span":{"begin":203,"end":208},"obj":"IN"},{"id":"T15972","span":{"begin":199,"end":202},"obj":"NN"},{"id":"T15971","span":{"begin":197,"end":198},"obj":"CD"},{"id":"T15970","span":{"begin":190,"end":196},"obj":"NN"},{"id":"T15969","span":{"begin":173,"end":189},"obj":"JJ"},{"id":"T15968","span":{"begin":170,"end":172},"obj":"IN"},{"id":"T15967","span":{"begin":154,"end":169},"obj":"NN"},{"id":"T15966","span":{"begin":143,"end":153},"obj":"NNP"},{"id":"T15965","span":{"begin":131,"end":142},"obj":"NNP"},{"id":"T15964","span":{"begin":129,"end":130},"obj":"-RRB-"},{"id":"T15963","span":{"begin":126,"end":129},"obj":"NNP"},{"id":"T15962","span":{"begin":125,"end":126},"obj":"-LRB-"},{"id":"T15961","span":{"begin":123,"end":124},"obj":"."},{"id":"T15960","span":{"begin":122,"end":123},"obj":"-RRB-"},{"id":"T15959","span":{"begin":116,"end":122},"obj":"NNS"},{"id":"T15958","span":{"begin":115,"end":116},"obj":"-LRB-"},{"id":"T15957","span":{"begin":109,"end":114},"obj":"NNS"},{"id":"T15956","span":{"begin":97,"end":108},"obj":"JJ"},{"id":"T15955","span":{"begin":81,"end":96},"obj":"JJ"},{"id":"T15954","span":{"begin":78,"end":80},"obj":"IN"},{"id":"T15953","span":{"begin":70,"end":77},"obj":"VBN"},{"id":"T15952","span":{"begin":67,"end":69},"obj":"VBZ"},{"id":"T15951","span":{"begin":56,"end":66},"obj":"NN"},{"id":"T15950","span":{"begin":49,"end":55},"obj":"NNP"},{"id":"T15949","span":{"begin":43,"end":48},"obj":"IN"},{"id":"T15948","span":{"begin":41,"end":42},"obj":","},{"id":"T15947","span":{"begin":33,"end":41},"obj":"VBN"},{"id":"T15946","span":{"begin":30,"end":32},"obj":"VBZ"},{"id":"T15945","span":{"begin":14,"end":29},"obj":"NN"},{"id":"T15944","span":{"begin":3,"end":13},"obj":"NN"},{"id":"T15943","span":{"begin":1,"end":2},"obj":"."}],"relations":[{"id":"R12226","pred":"compound","subj":"T15944","obj":"T15945"},{"id":"R12227","pred":"nsubjpass","subj":"T15945","obj":"T15947"},{"id":"R12228","pred":"auxpass","subj":"T15946","obj":"T15947"},{"id":"R12229","pred":"ROOT","subj":"T15947","obj":"T15947"},{"id":"R12230","pred":"punct","subj":"T15948","obj":"T15947"},{"id":"R12231","pred":"mark","subj":"T15949","obj":"T15953"},{"id":"R12232","pred":"compound","subj":"T15950","obj":"T15951"},{"id":"R12233","pred":"nsubjpass","subj":"T15951","obj":"T15953"},{"id":"R12234","pred":"auxpass","subj":"T15952","obj":"T15953"},{"id":"R12235","pred":"advcl","subj":"T15953","obj":"T15947"},{"id":"R12236","pred":"prep","subj":"T15954","obj":"T15953"},{"id":"R12237","pred":"amod","subj":"T15955","obj":"T15957"},{"id":"R12238","pred":"amod","subj":"T15956","obj":"T15957"},{"id":"R12239","pred":"pobj","subj":"T15957","obj":"T15954"},{"id":"R12240","pred":"punct","subj":"T15958","obj":"T15959"},{"id":"R12241","pred":"appos","subj":"T15959","obj":"T15957"},{"id":"R12242","pred":"punct","subj":"T15960","obj":"T15957"},{"id":"R12243","pred":"punct","subj":"T15961","obj":"T15947"},{"id":"R12244","pred":"punct","subj":"T15962","obj":"T15967"},{"id":"R12245","pred":"compound","subj":"T15963","obj":"T15967"},{"id":"R12246","pred":"punct","subj":"T15964","obj":"T15965"},{"id":"R12247","pred":"compound","subj":"T15965","obj":"T15967"},{"id":"R12248","pred":"compound","subj":"T15966","obj":"T15967"},{"id":"R12249","pred":"ROOT","subj":"T15967","obj":"T15967"},{"id":"R12250","pred":"prep","subj":"T15968","obj":"T15967"},{"id":"R12251","pred":"amod","subj":"T15969","obj":"T15970"},{"id":"R12252","pred":"pobj","subj":"T15970","obj":"T15968"},{"id":"R12253","pred":"nummod","subj":"T15971","obj":"T15972"},{"id":"R12254","pred":"npadvmod","subj":"T15972","obj":"T15973"},{"id":"R12255","pred":"prep","subj":"T15973","obj":"T15967"},{"id":"R12256","pred":"pobj","subj":"T15974","obj":"T15973"},{"id":"R12257","pred":"punct","subj":"T15975","obj":"T15967"},{"id":"R12258","pred":"amod","subj":"T15976","obj":"T15977"}],"text":"E. p65-Thr435 phosphorylation is enhanced, while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows). (F-G) Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE. sTNFp55R infusion eff"}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T16120","span":{"begin":154,"end":169},"obj":"Phosphorylation"},{"id":"T16119","span":{"begin":154,"end":169},"obj":"Phosphorylation"},{"id":"T16116","span":{"begin":213,"end":221},"obj":"Protein"},{"id":"T16115","span":{"begin":173,"end":181},"obj":"Protein"},{"id":"T16114","span":{"begin":147,"end":153},"obj":"Protein"},{"id":"T16113","span":{"begin":143,"end":146},"obj":"Protein"}],"relations":[{"id":"R12329","pred":"themeOf","subj":"T16113","obj":"T16119"},{"id":"R12330","pred":"themeOf","subj":"T16114","obj":"T16120"}],"text":"E. p65-Thr435 phosphorylation is enhanced, while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows). (F-G) Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE. sTNFp55R infusion eff"}

    testone

    {"project":"testone","denotations":[{"id":"T15738","span":{"begin":154,"end":169},"obj":"Phosphorylation"},{"id":"T15737","span":{"begin":88,"end":96},"obj":"Gene_expression"},{"id":"T15736","span":{"begin":70,"end":77},"obj":"Negative_regulation"},{"id":"T15735","span":{"begin":56,"end":66},"obj":"Gene_expression"},{"id":"T15734","span":{"begin":33,"end":41},"obj":"Positive_regulation"},{"id":"T15733","span":{"begin":14,"end":29},"obj":"Phosphorylation"},{"id":"T15722","span":{"begin":214,"end":221},"obj":"Protein"},{"id":"T15721","span":{"begin":174,"end":181},"obj":"Protein"},{"id":"T15720","span":{"begin":143,"end":146},"obj":"Protein"},{"id":"T15719","span":{"begin":81,"end":87},"obj":"Protein"},{"id":"T15718","span":{"begin":3,"end":6},"obj":"Protein"}],"relations":[{"id":"R12109","pred":"themeOf","subj":"T15718","obj":"T15733"},{"id":"R12110","pred":"causeOf","subj":"T15719","obj":"T15736"},{"id":"R12111","pred":"themeOf","subj":"T15719","obj":"T15737"},{"id":"R12112","pred":"themeOf","subj":"T15720","obj":"T15738"},{"id":"R12116","pred":"themeOf","subj":"T15733","obj":"T15734"},{"id":"R12117","pred":"themeOf","subj":"T15735","obj":"T15736"},{"id":"R12118","pred":"causeOf","subj":"T15737","obj":"T15736"}],"text":"E. p65-Thr435 phosphorylation is enhanced, while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows). (F-G) Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE. sTNFp55R infusion eff"}

    test3

    {"project":"test3","denotations":[{"id":"T15748","span":{"begin":3,"end":6},"obj":"Protein"},{"id":"T15778","span":{"begin":213,"end":221},"obj":"Protein"},{"id":"T15777","span":{"begin":173,"end":181},"obj":"Protein"},{"id":"T15776","span":{"begin":154,"end":169},"obj":"Phosphorylation"},{"id":"T15775","span":{"begin":143,"end":146},"obj":"Protein"},{"id":"T15774","span":{"begin":81,"end":87},"obj":"Protein"},{"id":"T15773","span":{"begin":70,"end":77},"obj":"Negative_regulation"},{"id":"T15772","span":{"begin":56,"end":66},"obj":"Gene_expression"},{"id":"T15771","span":{"begin":33,"end":41},"obj":"Positive_regulation"},{"id":"T15770","span":{"begin":14,"end":29},"obj":"Phosphorylation"},{"id":"T15769","span":{"begin":3,"end":6},"obj":"Protein"},{"id":"T15752","span":{"begin":214,"end":221},"obj":"Protein"},{"id":"T15751","span":{"begin":174,"end":181},"obj":"Protein"},{"id":"T15750","span":{"begin":143,"end":146},"obj":"Protein"},{"id":"T15749","span":{"begin":81,"end":87},"obj":"Protein"}],"relations":[{"id":"R12128","pred":"themeOf","subj":"T15769","obj":"T15770"},{"id":"R12129","pred":"themeOf","subj":"T15770","obj":"T15771"},{"id":"R12130","pred":"themeOf","subj":"T15771","obj":"T15773"},{"id":"R12131","pred":"themeOf","subj":"T15772","obj":"T15773"},{"id":"R12132","pred":"themeOf","subj":"T15775","obj":"T15776"}],"text":"E. p65-Thr435 phosphorylation is enhanced, while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows). (F-G) Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE. sTNFp55R infusion eff"}