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PMC:3312845 / 22927-23005 JSONTXT

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bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T15816 31-34 Protein denotes p65
T15815 11-18 Protein denotes TNFp55R

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T15873 31-34 http://www.uniprot.org/uniprot/P21579 denotes p65
T15865 31-34 http://www.uniprot.org/uniprot/Q04206 denotes p65

GO-BP

Id Subject Object Predicate Lexical cue
T15829 42-57 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

GO-CC

Id Subject Object Predicate Lexical cue
T15836 73-78 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

simple1

Id Subject Object Predicate Lexical cue
T15840 31-34 Protein denotes p65
T15839 11-18 Protein denotes TNFp55R

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T16153 31-34 Protein denotes p65
T16152 11-18 Protein denotes TNFp55R
T16166 42-57 Phosphorylation denotes phosphorylation
R12352 T16153 T16166 themeOf p65,phosphorylation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T16034 42-57 Phosphorylation denotes phosphorylation
T16021 31-34 Protein denotes p65
T16020 11-18 Protein denotes TNFp55R
R12288 T16021 T16034 themeOf p65,phosphorylation

DLUT931

Id Subject Object Predicate Lexical cue
T16059 42-57 Phosphorylation denotes phosphorylation
T16046 31-34 Protein denotes p65
T16045 11-18 Protein denotes TNFp55R
R12299 T16046 T16059 themeOf p65,phosphorylation

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T16211 0-78 Protein denotes Effect of sTNFp55R infusion on p65-Thr435 phosphorylation in endothelial cells
T16208 35-41 Entity denotes Thr435
T16204 0-78 Entity denotes Effect of sTNFp55R infusion on p65-Thr435 phosphorylation in endothelial cells
T16198 0-78 Protein denotes Effect of sTNFp55R infusion on p65-Thr435 phosphorylation in endothelial cells
T16181 61-78 Entity denotes endothelial cells

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T15890 73-78 NNS denotes cells
T15889 61-72 JJ denotes endothelial
T15888 58-60 IN denotes in
T15887 42-57 NN denotes phosphorylation
T15886 31-41 NN denotes p65-Thr435
T15885 28-30 IN denotes on
T15884 19-27 NN denotes infusion
T15883 10-18 JJ denotes sTNFp55R
T15882 7-9 IN denotes of
T15881 0-6 NN denotes Effect
R12163 T15881 T15881 ROOT Effect,Effect
R12164 T15882 T15881 prep of,Effect
R12165 T15883 T15884 amod sTNFp55R,infusion
R12166 T15884 T15882 pobj infusion,of
R12167 T15885 T15884 prep on,infusion
R12168 T15886 T15887 compound p65-Thr435,phosphorylation
R12169 T15887 T15885 pobj phosphorylation,on
R12170 T15888 T15887 prep in,phosphorylation
R12171 T15889 T15890 amod endothelial,cells
R12172 T15890 T15888 pobj cells,in

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T16100 0-6 Regulation denotes Effect
T16099 0-6 Regulation denotes Effect
T16098 42-57 Phosphorylation denotes phosphorylation
T16097 42-57 Phosphorylation denotes phosphorylation
T16096 35-41 Protein denotes Thr435
T16095 31-34 Protein denotes p65
T16094 10-18 Protein denotes sTNFp55R
R12318 T16095 T16097 themeOf p65,phosphorylation
R12319 T16096 T16098 themeOf Thr435,phosphorylation
R12320 T16097 T16099 themeOf phosphorylation,Effect
R12321 T16098 T16100 themeOf phosphorylation,Effect

testone

Id Subject Object Predicate Lexical cue
T15726 42-57 Phosphorylation denotes phosphorylation
T15725 0-6 Regulation denotes Effect
T15712 31-34 Protein denotes p65
T15711 11-18 Protein denotes TNFp55R
R12104 T15712 T15726 themeOf p65,phosphorylation
R12113 T15726 T15725 themeOf phosphorylation,Effect

test3

Id Subject Object Predicate Lexical cue
T15742 31-34 Protein denotes p65
T15741 11-18 Protein denotes TNFp55R
T15757 42-57 Phosphorylation denotes phosphorylation
T15756 31-34 Protein denotes p65
T15755 10-18 Protein denotes sTNFp55R
R12120 T15756 T15757 themeOf p65,phosphorylation