PMC:3312845 / 22917-23660
Annnotations
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15828 | 700-706 | Protein | denotes | GLUT-1 |
| T15827 | 654-657 | Protein | denotes | p65 |
| T15826 | 617-624 | Protein | denotes | TNFp55R |
| T15825 | 577-584 | Protein | denotes | TNFp55R |
| T15824 | 546-549 | Protein | denotes | p65 |
| T15823 | 484-490 | Protein | denotes | GLUT-1 |
| T15822 | 406-409 | Protein | denotes | p65 |
| T15821 | 337-340 | Protein | denotes | p65 |
| T15820 | 273-276 | Protein | denotes | p65 |
| T15819 | 187-190 | Protein | denotes | p65 |
| T15818 | 154-161 | Protein | denotes | TNFp55R |
| T15817 | 123-126 | Protein | denotes | p65 |
| T15816 | 41-44 | Protein | denotes | p65 |
| T15815 | 21-28 | Protein | denotes | TNFp55R |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15880 | 654-657 | http://www.uniprot.org/uniprot/P21579 | denotes | p65 |
| T15879 | 546-549 | http://www.uniprot.org/uniprot/P21579 | denotes | p65 |
| T15878 | 406-409 | http://www.uniprot.org/uniprot/P21579 | denotes | p65 |
| T15877 | 337-340 | http://www.uniprot.org/uniprot/P21579 | denotes | p65 |
| T15876 | 273-276 | http://www.uniprot.org/uniprot/P21579 | denotes | p65 |
| T15875 | 187-190 | http://www.uniprot.org/uniprot/P21579 | denotes | p65 |
| T15874 | 123-126 | http://www.uniprot.org/uniprot/P21579 | denotes | p65 |
| T15873 | 41-44 | http://www.uniprot.org/uniprot/P21579 | denotes | p65 |
| T15872 | 654-657 | http://www.uniprot.org/uniprot/Q04206 | denotes | p65 |
| T15871 | 546-549 | http://www.uniprot.org/uniprot/Q04206 | denotes | p65 |
| T15870 | 406-409 | http://www.uniprot.org/uniprot/Q04206 | denotes | p65 |
| T15869 | 337-340 | http://www.uniprot.org/uniprot/Q04206 | denotes | p65 |
| T15868 | 273-276 | http://www.uniprot.org/uniprot/Q04206 | denotes | p65 |
| T15867 | 187-190 | http://www.uniprot.org/uniprot/Q04206 | denotes | p65 |
| T15866 | 123-126 | http://www.uniprot.org/uniprot/Q04206 | denotes | p65 |
| T15865 | 41-44 | http://www.uniprot.org/uniprot/Q04206 | denotes | p65 |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15835 | 557-572 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
| T15834 | 417-432 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
| T15833 | 348-363 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
| T15832 | 284-299 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
| T15831 | 198-213 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
| T15830 | 134-149 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
| T15829 | 52-67 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15838 | 728-733 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T15837 | 512-517 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T15836 | 83-88 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15783 | 10-743 | Sentence | denotes | Effect of sTNFp55R infusion on p65-Thr435 phosphorylation in endothelial cells following SE. (A-B) Inhibition of p65-Thr435 phosphorylation by sTNFp55R infusion 12 hr after SE. p65-Thr435 phosphorylation is rarely observed in astrocytes (arrows). (C) Endothelial p65-Thr435 phosphorylation in non-SE animals. (D-E) Endothelial p65-Thr435 phosphorylation in saline-infused animals 1 day after SE. p65-Thr435 phosphorylation is enhanced, while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows). (F-G) Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE. sTNFp55R infusion effectively reduces p65-Thr435 and preserves SMI-71 expression in GLUT-1-positive endothelial cells (arrows). |
| T178 | 0-743 | Sentence | denotes | Figure 5 Effect of sTNFp55R infusion on p65-Thr435 phosphorylation in endothelial cells following SE. (A-B) Inhibition of p65-Thr435 phosphorylation by sTNFp55R infusion 12 hr after SE. p65-Thr435 phosphorylation is rarely observed in astrocytes (arrows). (C) Endothelial p65-Thr435 phosphorylation in non-SE animals. (D-E) Endothelial p65-Thr435 phosphorylation in saline-infused animals 1 day after SE. p65-Thr435 phosphorylation is enhanced, while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows). (F-G) Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE. sTNFp55R infusion effectively reduces p65-Thr435 and preserves SMI-71 expression in GLUT-1-positive endothelial cells (arrows). |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15852 | 700-706 | Protein | denotes | GLUT-1 |
| T15851 | 654-657 | Protein | denotes | p65 |
| T15850 | 617-624 | Protein | denotes | TNFp55R |
| T15849 | 577-584 | Protein | denotes | TNFp55R |
| T15848 | 546-549 | Protein | denotes | p65 |
| T15847 | 484-490 | Protein | denotes | GLUT-1 |
| T15846 | 406-409 | Protein | denotes | p65 |
| T15845 | 337-340 | Protein | denotes | p65 |
| T15844 | 273-276 | Protein | denotes | p65 |
| T15843 | 187-190 | Protein | denotes | p65 |
| T15842 | 154-161 | Protein | denotes | TNFp55R |
| T15841 | 123-126 | Protein | denotes | p65 |
| T15840 | 41-44 | Protein | denotes | p65 |
| T15839 | 21-28 | Protein | denotes | TNFp55R |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16176 | 646-653 | Negative_regulation | denotes | reduces |
| T16175 | 557-572 | Phosphorylation | denotes | phosphorylation |
| T16177 | 707-715 | Gene_expression | denotes | positive |
| T16161 | 546-549 | Protein | denotes | p65 |
| T16160 | 484-490 | Protein | denotes | GLUT-1 |
| T16159 | 406-409 | Protein | denotes | p65 |
| T16158 | 337-340 | Protein | denotes | p65 |
| T16157 | 273-276 | Protein | denotes | p65 |
| T16156 | 187-190 | Protein | denotes | p65 |
| T16155 | 154-161 | Protein | denotes | TNFp55R |
| T16154 | 123-126 | Protein | denotes | p65 |
| T16153 | 41-44 | Protein | denotes | p65 |
| T16152 | 21-28 | Protein | denotes | TNFp55R |
| T16174 | 491-499 | Gene_expression | denotes | positive |
| T16173 | 436-444 | Positive_regulation | denotes | enhanced |
| T16172 | 348-363 | Phosphorylation | denotes | phosphorylation |
| T16171 | 417-432 | Phosphorylation | denotes | phosphorylation |
| T16170 | 284-299 | Phosphorylation | denotes | phosphorylation |
| T16169 | 198-213 | Phosphorylation | denotes | phosphorylation |
| T16168 | 134-149 | Phosphorylation | denotes | phosphorylation |
| T16167 | 109-119 | Negative_regulation | denotes | Inhibition |
| T16166 | 52-67 | Phosphorylation | denotes | phosphorylation |
| T16165 | 700-706 | Protein | denotes | GLUT-1 |
| T16164 | 654-657 | Protein | denotes | p65 |
| T16163 | 617-624 | Protein | denotes | TNFp55R |
| T16162 | 577-584 | Protein | denotes | TNFp55R |
| R12358 | T16160 | T16174 | themeOf | GLUT-1,positive |
| R12359 | T16161 | T16175 | themeOf | p65,phosphorylation |
| R12360 | T16164 | T16176 | themeOf | p65,reduces |
| R12361 | T16165 | T16177 | themeOf | GLUT-1,positive |
| R12362 | T16168 | T16167 | themeOf | phosphorylation,Inhibition |
| R12363 | T16172 | T16173 | themeOf | phosphorylation,enhanced |
| R12352 | T16153 | T16166 | themeOf | p65,phosphorylation |
| R12353 | T16154 | T16168 | themeOf | p65,phosphorylation |
| R12354 | T16156 | T16169 | themeOf | p65,phosphorylation |
| R12355 | T16157 | T16170 | themeOf | p65,phosphorylation |
| R12356 | T16158 | T16172 | themeOf | p65,phosphorylation |
| R12357 | T16159 | T16171 | themeOf | p65,phosphorylation |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16044 | 557-572 | Phosphorylation | denotes | phosphorylation |
| T16043 | 707-715 | Gene_expression | denotes | positive |
| T16042 | 646-653 | Negative_regulation | denotes | reduces |
| T16041 | 491-499 | Gene_expression | denotes | positive |
| T16040 | 436-444 | Positive_regulation | denotes | enhanced |
| T16039 | 348-363 | Phosphorylation | denotes | phosphorylation |
| T16038 | 417-432 | Phosphorylation | denotes | phosphorylation |
| T16037 | 284-299 | Phosphorylation | denotes | phosphorylation |
| T16036 | 198-213 | Phosphorylation | denotes | phosphorylation |
| T16035 | 134-149 | Phosphorylation | denotes | phosphorylation |
| T16034 | 52-67 | Phosphorylation | denotes | phosphorylation |
| T16033 | 700-706 | Protein | denotes | GLUT-1 |
| T16032 | 654-657 | Protein | denotes | p65 |
| T16031 | 617-624 | Protein | denotes | TNFp55R |
| T16030 | 577-584 | Protein | denotes | TNFp55R |
| T16029 | 546-549 | Protein | denotes | p65 |
| T16028 | 484-490 | Protein | denotes | GLUT-1 |
| T16027 | 406-409 | Protein | denotes | p65 |
| T16026 | 337-340 | Protein | denotes | p65 |
| T16025 | 273-276 | Protein | denotes | p65 |
| T16024 | 187-190 | Protein | denotes | p65 |
| T16023 | 154-161 | Protein | denotes | TNFp55R |
| T16022 | 123-126 | Protein | denotes | p65 |
| T16021 | 41-44 | Protein | denotes | p65 |
| T16020 | 21-28 | Protein | denotes | TNFp55R |
| R12288 | T16021 | T16034 | themeOf | p65,phosphorylation |
| R12289 | T16022 | T16035 | themeOf | p65,phosphorylation |
| R12290 | T16024 | T16036 | themeOf | p65,phosphorylation |
| R12291 | T16025 | T16037 | themeOf | p65,phosphorylation |
| R12292 | T16026 | T16039 | themeOf | p65,phosphorylation |
| R12293 | T16027 | T16038 | themeOf | p65,phosphorylation |
| R12294 | T16028 | T16041 | themeOf | GLUT-1,positive |
| R12295 | T16029 | T16044 | themeOf | p65,phosphorylation |
| R12296 | T16032 | T16042 | themeOf | p65,reduces |
| R12297 | T16033 | T16043 | themeOf | GLUT-1,positive |
| R12298 | T16039 | T16040 | themeOf | phosphorylation,enhanced |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16070 | 707-715 | Gene_expression | denotes | positive |
| T16069 | 585-592 | Positive_regulation | denotes | infused |
| T16068 | 557-572 | Phosphorylation | denotes | phosphorylation |
| T16067 | 491-499 | Gene_expression | denotes | positive |
| T16066 | 436-444 | Positive_regulation | denotes | enhanced |
| T16065 | 417-432 | Phosphorylation | denotes | phosphorylation |
| T16064 | 348-363 | Phosphorylation | denotes | phosphorylation |
| T16063 | 284-299 | Phosphorylation | denotes | phosphorylation |
| T16062 | 109-119 | Negative_regulation | denotes | Inhibition |
| T16061 | 198-213 | Phosphorylation | denotes | phosphorylation |
| T16060 | 134-149 | Phosphorylation | denotes | phosphorylation |
| T16059 | 52-67 | Phosphorylation | denotes | phosphorylation |
| T16058 | 700-706 | Protein | denotes | GLUT-1 |
| T16057 | 654-657 | Protein | denotes | p65 |
| T16056 | 617-624 | Protein | denotes | TNFp55R |
| T16055 | 577-584 | Protein | denotes | TNFp55R |
| T16054 | 546-549 | Protein | denotes | p65 |
| T16053 | 484-490 | Protein | denotes | GLUT-1 |
| T16052 | 406-409 | Protein | denotes | p65 |
| T16051 | 337-340 | Protein | denotes | p65 |
| T16050 | 273-276 | Protein | denotes | p65 |
| T16049 | 187-190 | Protein | denotes | p65 |
| T16048 | 154-161 | Protein | denotes | TNFp55R |
| T16047 | 123-126 | Protein | denotes | p65 |
| T16046 | 41-44 | Protein | denotes | p65 |
| T16045 | 21-28 | Protein | denotes | TNFp55R |
| R12299 | T16046 | T16059 | themeOf | p65,phosphorylation |
| R12300 | T16047 | T16060 | themeOf | p65,phosphorylation |
| R12301 | T16049 | T16061 | themeOf | p65,phosphorylation |
| R12302 | T16050 | T16063 | themeOf | p65,phosphorylation |
| R12303 | T16051 | T16064 | themeOf | p65,phosphorylation |
| R12304 | T16052 | T16065 | themeOf | p65,phosphorylation |
| R12305 | T16053 | T16067 | themeOf | GLUT-1,positive |
| R12306 | T16054 | T16068 | themeOf | p65,phosphorylation |
| R12307 | T16055 | T16069 | themeOf | TNFp55R,infused |
| R12308 | T16058 | T16070 | themeOf | GLUT-1,positive |
| R12309 | T16060 | T16062 | themeOf | phosphorylation,Inhibition |
| R12310 | T16064 | T16066 | themeOf | phosphorylation,enhanced |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16220 | 446-526 | Negative_regulation | denotes | while SMI-71 expression is reduced in GLUT-1-positive endothelial cells (arrows) |
| T16219 | 325-404 | Phosphorylation | denotes | Endothelial p65-Thr435 phosphorylation in saline-infused animals 1 day after SE |
| T16218 | 120-149 | Phosphorylation | denotes | of p65-Thr435 phosphorylation |
| T16217 | 187-255 | Phosphorylation | denotes | p65-Thr435 phosphorylation is rarely observed in astrocytes (arrows) |
| T16216 | 406-432 | Phosphorylation | denotes | p65-Thr435 phosphorylation |
| T16215 | 261-317 | Phosphorylation | denotes | Endothelial p65-Thr435 phosphorylation in non-SE animals |
| T16214 | 534-614 | Phosphorylation | denotes | Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE |
| T16213 | 406-444 | Positive_regulation | denotes | p65-Thr435 phosphorylation is enhanced |
| T16212 | 187-197 | Entity | denotes | p65-Thr435 |
| T16211 | 10-88 | Protein | denotes | Effect of sTNFp55R infusion on p65-Thr435 phosphorylation in endothelial cells |
| T16210 | 491-517 | Entity | denotes | positive endothelial cells |
| T16209 | 654-664 | Protein | denotes | p65-Thr435 |
| T16208 | 45-51 | Entity | denotes | Thr435 |
| T16207 | 277-283 | Entity | denotes | Thr435 |
| T16206 | 261-317 | Protein | denotes | Endothelial p65-Thr435 phosphorylation in non-SE animals |
| T16205 | 320-323 | Entity | denotes | D-E |
| T16204 | 10-88 | Entity | denotes | Effect of sTNFp55R infusion on p65-Thr435 phosphorylation in endothelial cells |
| T16203 | 707-733 | Entity | denotes | positive endothelial cells |
| T16202 | 337-347 | Protein | denotes | p65-Thr435 |
| T16201 | 546-556 | Entity | denotes | p65-Thr435 |
| T16200 | 154-157 | Protein | denotes | TNF |
| T16199 | 406-416 | Protein | denotes | p65-Thr435 |
| T16198 | 10-88 | Protein | denotes | Effect of sTNFp55R infusion on p65-Thr435 phosphorylation in endothelial cells |
| T16197 | 187-197 | Protein | denotes | p65-Thr435 |
| T16196 | 406-416 | Entity | denotes | p65-Thr435 |
| T16195 | 576-614 | Entity | denotes | sTNFp55R-infused animal 1 day after SE |
| T16194 | 546-556 | Protein | denotes | p65-Thr435 |
| T16193 | 150-170 | Entity | denotes | by sTNFp55R infusion |
| T16192 | 625-633 | Entity | denotes | infusion |
| T16191 | 183-185 | Entity | denotes | SE |
| T16190 | 484-490 | Protein | denotes | GLUT-1 |
| T16189 | 123-133 | Protein | denotes | p65-Thr435 |
| T16188 | 617-624 | Protein | denotes | TNFp55R |
| T16186 | 700-706 | Protein | denotes | GLUT-1 |
| T16185 | 617-624 | Entity | denotes | TNFp55R |
| T16184 | 337-347 | Entity | denotes | p65-Thr435 |
| T16183 | 367-404 | Protein | denotes | saline-infused animals 1 day after SE |
| T16182 | 123-133 | Entity | denotes | p65-Thr435 |
| T16181 | 71-88 | Entity | denotes | endothelial cells |
| T16180 | 236-255 | Entity | denotes | astrocytes (arrows) |
| T16179 | 654-664 | Entity | denotes | p65-Thr435 |
| T16178 | 99-101 | Protein | denotes | SE |
| R12364 | T16182 | T16189 | partOf | p65-Thr435,p65-Thr435 |
| R12365 | T16182 | T16218 | siteOf | p65-Thr435,of p65-Thr435 phosphorylation |
| R12366 | T16184 | T16202 | partOf | p65-Thr435,p65-Thr435 |
| R12367 | T16184 | T16219 | siteOf | p65-Thr435,Endothelial p65-Thr435 phosphorylation in saline-infused animals 1 day after SE |
| R12368 | T16189 | T16218 | themeOf | p65-Thr435,of p65-Thr435 phosphorylation |
| R12369 | T16194 | T16214 | themeOf | p65-Thr435,Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE |
| R12370 | T16196 | T16199 | partOf | p65-Thr435,p65-Thr435 |
| R12371 | T16196 | T16216 | siteOf | p65-Thr435,p65-Thr435 phosphorylation |
| R12372 | T16197 | T16217 | themeOf | p65-Thr435,p65-Thr435 phosphorylation is rarely observed in astrocytes (arrows) |
| R12373 | T16199 | T16216 | themeOf | p65-Thr435,p65-Thr435 phosphorylation |
| R12374 | T16201 | T16194 | partOf | p65-Thr435,p65-Thr435 |
| R12375 | T16201 | T16214 | siteOf | p65-Thr435,Endothelial p65-Thr435 phosphorylation in sTNFp55R-infused animal 1 day after SE |
| R12376 | T16202 | T16219 | themeOf | p65-Thr435,Endothelial p65-Thr435 phosphorylation in saline-infused animals 1 day after SE |
| R12377 | T16206 | T16215 | themeOf | Endothelial p65-Thr435 phosphorylation in non-SE animals,Endothelial p65-Thr435 phosphorylation in non-SE animals |
| R12378 | T16207 | T16206 | partOf | Thr435,Endothelial p65-Thr435 phosphorylation in non-SE animals |
| R12379 | T16207 | T16215 | siteOf | Thr435,Endothelial p65-Thr435 phosphorylation in non-SE animals |
| R12380 | T16212 | T16197 | partOf | p65-Thr435,p65-Thr435 |
| R12381 | T16212 | T16217 | siteOf | p65-Thr435,p65-Thr435 phosphorylation is rarely observed in astrocytes (arrows) |
| R12382 | T16216 | T16213 | themeOf | p65-Thr435 phosphorylation,p65-Thr435 phosphorylation is enhanced |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15992 | 742-743 | . | denotes | . |
| T15991 | 741-742 | -RRB- | denotes | ) |
| T15990 | 735-741 | NNS | denotes | arrows |
| T15989 | 734-735 | -LRB- | denotes | ( |
| T15988 | 728-733 | NNS | denotes | cells |
| T15987 | 716-727 | JJ | denotes | endothelial |
| T15986 | 700-715 | JJ | denotes | GLUT-1-positive |
| T15985 | 697-699 | IN | denotes | in |
| T15984 | 686-696 | NN | denotes | expression |
| T15983 | 679-685 | NNP | denotes | SMI-71 |
| T15982 | 669-678 | VBZ | denotes | preserves |
| T15981 | 665-668 | CC | denotes | and |
| T15980 | 654-664 | NN | denotes | p65-Thr435 |
| T15979 | 646-653 | VBZ | denotes | reduces |
| T15978 | 634-645 | RB | denotes | effectively |
| T15977 | 625-633 | NN | denotes | infusion |
| T15976 | 616-624 | JJ | denotes | sTNFp55R |
| T15975 | 614-615 | . | denotes | . |
| T15974 | 612-614 | NNP | denotes | SE |
| T15973 | 606-611 | IN | denotes | after |
| T15972 | 602-605 | NN | denotes | day |
| T15971 | 600-601 | CD | denotes | 1 |
| T15970 | 593-599 | NN | denotes | animal |
| T15969 | 576-592 | JJ | denotes | sTNFp55R-infused |
| T15968 | 573-575 | IN | denotes | in |
| T15967 | 557-572 | NN | denotes | phosphorylation |
| T15966 | 546-556 | NNP | denotes | p65-Thr435 |
| T15965 | 534-545 | NNP | denotes | Endothelial |
| T15964 | 532-533 | -RRB- | denotes | ) |
| T15963 | 529-532 | NNP | denotes | F-G |
| T15962 | 528-529 | -LRB- | denotes | ( |
| T15961 | 526-527 | . | denotes | . |
| T15938 | 382-389 | NNS | denotes | animals |
| T15937 | 367-381 | JJ | denotes | saline-infused |
| T15936 | 364-366 | IN | denotes | in |
| T15935 | 348-363 | NN | denotes | phosphorylation |
| T15934 | 337-347 | NNP | denotes | p65-Thr435 |
| T15933 | 325-336 | NNP | denotes | Endothelial |
| T15932 | 323-324 | -RRB- | denotes | ) |
| T15931 | 320-323 | NNP | denotes | D-E |
| T15930 | 319-320 | -LRB- | denotes | ( |
| T15929 | 317-318 | . | denotes | . |
| T15928 | 310-317 | NNS | denotes | animals |
| T15927 | 303-309 | JJ | denotes | non-SE |
| T15926 | 300-302 | IN | denotes | in |
| T15925 | 284-299 | NN | denotes | phosphorylation |
| T15924 | 273-283 | NNP | denotes | p65-Thr435 |
| T15923 | 261-272 | NNP | denotes | Endothelial |
| T15922 | 259-260 | -RRB- | denotes | ) |
| T15921 | 258-259 | NNP | denotes | C |
| T15920 | 257-258 | -LRB- | denotes | ( |
| T15919 | 255-256 | . | denotes | . |
| T15918 | 254-255 | -RRB- | denotes | ) |
| T15917 | 248-254 | NNS | denotes | arrows |
| T15916 | 247-248 | -LRB- | denotes | ( |
| T15915 | 236-246 | NNS | denotes | astrocytes |
| T15914 | 233-235 | IN | denotes | in |
| T15913 | 224-232 | VBN | denotes | observed |
| T15912 | 217-223 | RB | denotes | rarely |
| T15911 | 214-216 | VBZ | denotes | is |
| T15910 | 198-213 | NN | denotes | phosphorylation |
| T15909 | 187-197 | NN | denotes | p65-Thr435 |
| T15908 | 185-186 | . | denotes | . |
| T15907 | 183-185 | NNP | denotes | SE |
| T15906 | 177-182 | IN | denotes | after |
| T15905 | 174-176 | NN | denotes | hr |
| T15904 | 171-173 | CD | denotes | 12 |
| T15903 | 162-170 | NN | denotes | infusion |
| T15902 | 153-161 | JJ | denotes | sTNFp55R |
| T15901 | 150-152 | IN | denotes | by |
| T15900 | 134-149 | NN | denotes | phosphorylation |
| T15899 | 123-133 | NNP | denotes | p65-Thr435 |
| T15898 | 120-122 | IN | denotes | of |
| T15897 | 109-119 | NNP | denotes | Inhibition |
| T15896 | 107-108 | -RRB- | denotes | ) |
| T15895 | 104-107 | NNP | denotes | A-B |
| T15894 | 103-104 | -LRB- | denotes | ( |
| T15893 | 101-102 | . | denotes | . |
| T15892 | 99-101 | NNP | denotes | SE |
| T15891 | 89-98 | VBG | denotes | following |
| T15890 | 83-88 | NNS | denotes | cells |
| T15889 | 71-82 | JJ | denotes | endothelial |
| T15888 | 68-70 | IN | denotes | in |
| T15887 | 52-67 | NN | denotes | phosphorylation |
| T15886 | 41-51 | NN | denotes | p65-Thr435 |
| T15885 | 38-40 | IN | denotes | on |
| T15884 | 29-37 | NN | denotes | infusion |
| T15883 | 20-28 | JJ | denotes | sTNFp55R |
| T15882 | 17-19 | IN | denotes | of |
| T15881 | 10-16 | NN | denotes | Effect |
| T15960 | 525-526 | -RRB- | denotes | ) |
| T15959 | 519-525 | NNS | denotes | arrows |
| T15958 | 518-519 | -LRB- | denotes | ( |
| T15957 | 512-517 | NNS | denotes | cells |
| T15956 | 500-511 | JJ | denotes | endothelial |
| T15955 | 484-499 | JJ | denotes | GLUT-1-positive |
| T15954 | 481-483 | IN | denotes | in |
| T15953 | 473-480 | VBN | denotes | reduced |
| T15952 | 470-472 | VBZ | denotes | is |
| T15951 | 459-469 | NN | denotes | expression |
| T15950 | 452-458 | NNP | denotes | SMI-71 |
| T15949 | 446-451 | IN | denotes | while |
| T15948 | 444-445 | , | denotes | , |
| T15947 | 436-444 | VBN | denotes | enhanced |
| T15946 | 433-435 | VBZ | denotes | is |
| T15945 | 417-432 | NN | denotes | phosphorylation |
| T15944 | 406-416 | NN | denotes | p65-Thr435 |
| T15943 | 404-405 | . | denotes | . |
| T15942 | 402-404 | NNP | denotes | SE |
| T15941 | 396-401 | IN | denotes | after |
| T15940 | 392-395 | NN | denotes | day |
| T15939 | 390-391 | CD | denotes | 1 |
| R12163 | T15881 | T15881 | ROOT | Effect,Effect |
| R12164 | T15882 | T15881 | prep | of,Effect |
| R12165 | T15883 | T15884 | amod | sTNFp55R,infusion |
| R12166 | T15884 | T15882 | pobj | infusion,of |
| R12167 | T15885 | T15884 | prep | on,infusion |
| R12168 | T15886 | T15887 | compound | p65-Thr435,phosphorylation |
| R12169 | T15887 | T15885 | pobj | phosphorylation,on |
| R12170 | T15888 | T15887 | prep | in,phosphorylation |
| R12171 | T15889 | T15890 | amod | endothelial,cells |
| R12172 | T15890 | T15888 | pobj | cells,in |
| R12173 | T15891 | T15881 | prep | following,Effect |
| R12174 | T15892 | T15891 | dobj | SE,following |
| R12175 | T15893 | T15881 | punct | .,Effect |
| R12176 | T15894 | T15897 | punct | (,Inhibition |
| R12177 | T15895 | T15897 | nmod | A-B,Inhibition |
| R12178 | T15896 | T15897 | punct | ),Inhibition |
| R12179 | T15897 | T15897 | ROOT | Inhibition,Inhibition |
| R12180 | T15898 | T15897 | prep | of,Inhibition |
| R12181 | T15899 | T15900 | compound | p65-Thr435,phosphorylation |
| R12182 | T15900 | T15898 | pobj | phosphorylation,of |
| R12183 | T15901 | T15900 | prep | by,phosphorylation |
| R12184 | T15902 | T15903 | amod | sTNFp55R,infusion |
| R12185 | T15903 | T15901 | pobj | infusion,by |
| R12186 | T15904 | T15905 | nummod | 12,hr |
| R12187 | T15905 | T15897 | conj | hr,Inhibition |
| R12188 | T15906 | T15897 | prep | after,Inhibition |
| R12189 | T15907 | T15906 | pobj | SE,after |
| R12190 | T15908 | T15897 | punct | .,Inhibition |
| R12191 | T15909 | T15910 | compound | p65-Thr435,phosphorylation |
| R12192 | T15910 | T15913 | nsubjpass | phosphorylation,observed |
| R12193 | T15911 | T15913 | auxpass | is,observed |
| R12194 | T15912 | T15913 | advmod | rarely,observed |
| R12195 | T15913 | T15913 | ROOT | observed,observed |
| R12196 | T15914 | T15913 | prep | in,observed |
| R12197 | T15915 | T15914 | pobj | astrocytes,in |
| R12198 | T15916 | T15917 | punct | (,arrows |
| R12199 | T15917 | T15915 | appos | arrows,astrocytes |
| R12200 | T15918 | T15915 | punct | ),astrocytes |
| R12201 | T15919 | T15913 | punct | .,observed |
| R12202 | T15920 | T15925 | punct | (,phosphorylation |
| R12203 | T15921 | T15925 | nmod | C,phosphorylation |
| R12204 | T15922 | T15921 | punct | ),C |
| R12205 | T15923 | T15925 | compound | Endothelial,phosphorylation |
| R12206 | T15924 | T15925 | compound | p65-Thr435,phosphorylation |
| R12207 | T15925 | T15925 | ROOT | phosphorylation,phosphorylation |
| R12208 | T15926 | T15925 | prep | in,phosphorylation |
| R12209 | T15927 | T15928 | amod | non-SE,animals |
| R12210 | T15928 | T15926 | pobj | animals,in |
| R12211 | T15929 | T15925 | punct | .,phosphorylation |
| R12212 | T15930 | T15935 | punct | (,phosphorylation |
| R12213 | T15931 | T15935 | compound | D-E,phosphorylation |
| R12214 | T15932 | T15933 | punct | ),Endothelial |
| R12215 | T15933 | T15935 | compound | Endothelial,phosphorylation |
| R12216 | T15934 | T15935 | compound | p65-Thr435,phosphorylation |
| R12217 | T15935 | T15935 | ROOT | phosphorylation,phosphorylation |
| R12218 | T15936 | T15935 | prep | in,phosphorylation |
| R12219 | T15937 | T15938 | amod | saline-infused,animals |
| R12220 | T15938 | T15936 | pobj | animals,in |
| R12221 | T15939 | T15940 | nummod | 1,day |
| R12222 | T15940 | T15935 | npadvmod | day,phosphorylation |
| R12223 | T15941 | T15940 | prep | after,day |
| R12224 | T15942 | T15941 | pobj | SE,after |
| R12225 | T15943 | T15935 | punct | .,phosphorylation |
| R12226 | T15944 | T15945 | compound | p65-Thr435,phosphorylation |
| R12227 | T15945 | T15947 | nsubjpass | phosphorylation,enhanced |
| R12228 | T15946 | T15947 | auxpass | is,enhanced |
| R12229 | T15947 | T15947 | ROOT | enhanced,enhanced |
| R12230 | T15948 | T15947 | punct | ",",enhanced |
| R12231 | T15949 | T15953 | mark | while,reduced |
| R12232 | T15950 | T15951 | compound | SMI-71,expression |
| R12233 | T15951 | T15953 | nsubjpass | expression,reduced |
| R12234 | T15952 | T15953 | auxpass | is,reduced |
| R12235 | T15953 | T15947 | advcl | reduced,enhanced |
| R12236 | T15954 | T15953 | prep | in,reduced |
| R12237 | T15955 | T15957 | amod | GLUT-1-positive,cells |
| R12238 | T15956 | T15957 | amod | endothelial,cells |
| R12239 | T15957 | T15954 | pobj | cells,in |
| R12240 | T15958 | T15959 | punct | (,arrows |
| R12241 | T15959 | T15957 | appos | arrows,cells |
| R12242 | T15960 | T15957 | punct | ),cells |
| R12243 | T15961 | T15947 | punct | .,enhanced |
| R12244 | T15962 | T15967 | punct | (,phosphorylation |
| R12245 | T15963 | T15967 | compound | F-G,phosphorylation |
| R12246 | T15964 | T15965 | punct | ),Endothelial |
| R12247 | T15965 | T15967 | compound | Endothelial,phosphorylation |
| R12248 | T15966 | T15967 | compound | p65-Thr435,phosphorylation |
| R12249 | T15967 | T15967 | ROOT | phosphorylation,phosphorylation |
| R12250 | T15968 | T15967 | prep | in,phosphorylation |
| R12251 | T15969 | T15970 | amod | sTNFp55R-infused,animal |
| R12252 | T15970 | T15968 | pobj | animal,in |
| R12253 | T15971 | T15972 | nummod | 1,day |
| R12254 | T15972 | T15973 | npadvmod | day,after |
| R12255 | T15973 | T15967 | prep | after,phosphorylation |
| R12256 | T15974 | T15973 | pobj | SE,after |
| R12257 | T15975 | T15967 | punct | .,phosphorylation |
| R12258 | T15976 | T15977 | amod | sTNFp55R,infusion |
| R12259 | T15977 | T15979 | nsubj | infusion,reduces |
| R12260 | T15978 | T15979 | advmod | effectively,reduces |
| R12261 | T15979 | T15979 | ROOT | reduces,reduces |
| R12262 | T15980 | T15979 | dobj | p65-Thr435,reduces |
| R12263 | T15981 | T15979 | cc | and,reduces |
| R12264 | T15982 | T15979 | conj | preserves,reduces |
| R12265 | T15983 | T15984 | compound | SMI-71,expression |
| R12266 | T15984 | T15982 | dobj | expression,preserves |
| R12267 | T15985 | T15984 | prep | in,expression |
| R12268 | T15986 | T15988 | amod | GLUT-1-positive,cells |
| R12269 | T15987 | T15988 | amod | endothelial,cells |
| R12270 | T15988 | T15985 | pobj | cells,in |
| R12271 | T15989 | T15990 | punct | (,arrows |
| R12272 | T15990 | T15988 | appos | arrows,cells |
| R12273 | T15991 | T15988 | punct | ),cells |
| R12274 | T15992 | T15979 | punct | .,reduces |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16122 | 646-653 | Negative_regulation | denotes | reduces |
| T16121 | 646-653 | Negative_regulation | denotes | reduces |
| T16120 | 557-572 | Phosphorylation | denotes | phosphorylation |
| T16119 | 557-572 | Phosphorylation | denotes | phosphorylation |
| T16118 | 658-664 | Protein | denotes | Thr435 |
| T16117 | 654-657 | Protein | denotes | p65 |
| T16116 | 616-624 | Protein | denotes | sTNFp55R |
| T16115 | 576-584 | Protein | denotes | sTNFp55R |
| T16114 | 550-556 | Protein | denotes | Thr435 |
| T16113 | 546-549 | Protein | denotes | p65 |
| T16112 | 284-299 | Phosphorylation | denotes | phosphorylation |
| T16111 | 284-299 | Phosphorylation | denotes | phosphorylation |
| T16110 | 277-283 | Protein | denotes | Thr435 |
| T16109 | 273-276 | Protein | denotes | p65 |
| T16108 | 109-119 | Negative_regulation | denotes | Inhibition |
| T16107 | 109-119 | Negative_regulation | denotes | Inhibition |
| T16106 | 198-213 | Phosphorylation | denotes | phosphorylation |
| T16105 | 134-149 | Phosphorylation | denotes | phosphorylation |
| T16104 | 134-149 | Phosphorylation | denotes | phosphorylation |
| T16103 | 153-161 | Protein | denotes | sTNFp55R |
| T16102 | 127-133 | Protein | denotes | Thr435 |
| T16101 | 123-126 | Protein | denotes | p65 |
| T16100 | 10-16 | Regulation | denotes | Effect |
| T16099 | 10-16 | Regulation | denotes | Effect |
| T16098 | 52-67 | Phosphorylation | denotes | phosphorylation |
| T16097 | 52-67 | Phosphorylation | denotes | phosphorylation |
| T16096 | 45-51 | Protein | denotes | Thr435 |
| T16095 | 41-44 | Protein | denotes | p65 |
| T16094 | 20-28 | Protein | denotes | sTNFp55R |
| R12324 | T16103 | T16106 | themeOf | sTNFp55R,phosphorylation |
| R12325 | T16104 | T16107 | themeOf | phosphorylation,Inhibition |
| R12326 | T16105 | T16108 | themeOf | phosphorylation,Inhibition |
| R12327 | T16109 | T16111 | themeOf | p65,phosphorylation |
| R12328 | T16110 | T16112 | themeOf | Thr435,phosphorylation |
| R12329 | T16113 | T16119 | themeOf | p65,phosphorylation |
| R12330 | T16114 | T16120 | themeOf | Thr435,phosphorylation |
| R12331 | T16118 | T16121 | themeOf | Thr435,reduces |
| R12332 | T16118 | T16122 | themeOf | Thr435,reduces |
| R12333 | T16121 | T16119 | Cause | reduces,phosphorylation |
| R12334 | T16122 | T16120 | Cause | reduces,phosphorylation |
| R12318 | T16095 | T16097 | themeOf | p65,phosphorylation |
| R12319 | T16096 | T16098 | themeOf | Thr435,phosphorylation |
| R12320 | T16097 | T16099 | themeOf | phosphorylation,Effect |
| R12321 | T16098 | T16100 | themeOf | phosphorylation,Effect |
| R12322 | T16101 | T16104 | themeOf | p65,phosphorylation |
| R12323 | T16102 | T16105 | themeOf | Thr435,phosphorylation |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15740 | 686-696 | Gene_expression | denotes | expression |
| T15739 | 646-653 | Negative_regulation | denotes | reduces |
| T15738 | 557-572 | Phosphorylation | denotes | phosphorylation |
| T15737 | 491-499 | Gene_expression | denotes | positive |
| T15736 | 473-480 | Negative_regulation | denotes | reduced |
| T15735 | 459-469 | Gene_expression | denotes | expression |
| T15734 | 436-444 | Positive_regulation | denotes | enhanced |
| T15733 | 417-432 | Phosphorylation | denotes | phosphorylation |
| T15732 | 348-363 | Phosphorylation | denotes | phosphorylation |
| T15731 | 284-299 | Phosphorylation | denotes | phosphorylation |
| T15730 | 198-213 | Phosphorylation | denotes | phosphorylation |
| T15729 | 134-149 | Phosphorylation | denotes | phosphorylation |
| T15728 | 109-119 | Negative_regulation | denotes | Inhibition |
| T15727 | 89-98 | Positive_regulation | denotes | following |
| T15726 | 52-67 | Phosphorylation | denotes | phosphorylation |
| T15725 | 10-16 | Regulation | denotes | Effect |
| T15724 | 700-706 | Protein | denotes | GLUT-1 |
| T15723 | 654-657 | Protein | denotes | p65 |
| T15722 | 617-624 | Protein | denotes | TNFp55R |
| T15721 | 577-584 | Protein | denotes | TNFp55R |
| T15720 | 546-549 | Protein | denotes | p65 |
| T15719 | 484-490 | Protein | denotes | GLUT-1 |
| T15718 | 406-409 | Protein | denotes | p65 |
| T15717 | 337-340 | Protein | denotes | p65 |
| T15716 | 273-276 | Protein | denotes | p65 |
| T15715 | 187-190 | Protein | denotes | p65 |
| T15714 | 154-161 | Protein | denotes | TNFp55R |
| T15713 | 123-126 | Protein | denotes | p65 |
| T15712 | 41-44 | Protein | denotes | p65 |
| T15711 | 21-28 | Protein | denotes | TNFp55R |
| R12104 | T15712 | T15726 | themeOf | p65,phosphorylation |
| R12105 | T15713 | T15729 | themeOf | p65,phosphorylation |
| R12106 | T15715 | T15730 | themeOf | p65,phosphorylation |
| R12107 | T15716 | T15731 | themeOf | p65,phosphorylation |
| R12108 | T15717 | T15732 | themeOf | p65,phosphorylation |
| R12109 | T15718 | T15733 | themeOf | p65,phosphorylation |
| R12110 | T15719 | T15736 | causeOf | GLUT-1,reduced |
| R12111 | T15719 | T15737 | themeOf | GLUT-1,positive |
| R12112 | T15720 | T15738 | themeOf | p65,phosphorylation |
| R12113 | T15726 | T15725 | themeOf | phosphorylation,Effect |
| R12114 | T15726 | T15727 | themeOf | phosphorylation,following |
| R12115 | T15729 | T15728 | themeOf | phosphorylation,Inhibition |
| R12116 | T15733 | T15734 | themeOf | phosphorylation,enhanced |
| R12117 | T15735 | T15736 | themeOf | expression,reduced |
| R12118 | T15737 | T15736 | causeOf | positive,reduced |
| R12119 | T15740 | T15739 | themeOf | expression,reduces |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15748 | 406-409 | Protein | denotes | p65 |
| T15747 | 337-340 | Protein | denotes | p65 |
| T15746 | 273-276 | Protein | denotes | p65 |
| T15745 | 187-190 | Protein | denotes | p65 |
| T15744 | 154-161 | Protein | denotes | TNFp55R |
| T15743 | 123-126 | Protein | denotes | p65 |
| T15742 | 41-44 | Protein | denotes | p65 |
| T15741 | 21-28 | Protein | denotes | TNFp55R |
| T15782 | 700-706 | Protein | denotes | GLUT-1 |
| T15781 | 686-696 | Gene_expression | denotes | expression |
| T15780 | 654-657 | Protein | denotes | p65 |
| T15779 | 646-653 | Negative_regulation | denotes | reduces |
| T15778 | 616-624 | Protein | denotes | sTNFp55R |
| T15777 | 576-584 | Protein | denotes | sTNFp55R |
| T15776 | 557-572 | Phosphorylation | denotes | phosphorylation |
| T15775 | 546-549 | Protein | denotes | p65 |
| T15774 | 484-490 | Protein | denotes | GLUT-1 |
| T15773 | 473-480 | Negative_regulation | denotes | reduced |
| T15772 | 459-469 | Gene_expression | denotes | expression |
| T15771 | 436-444 | Positive_regulation | denotes | enhanced |
| T15770 | 417-432 | Phosphorylation | denotes | phosphorylation |
| T15769 | 406-409 | Protein | denotes | p65 |
| T15768 | 348-363 | Phosphorylation | denotes | phosphorylation |
| T15767 | 337-340 | Protein | denotes | p65 |
| T15766 | 284-299 | Phosphorylation | denotes | phosphorylation |
| T15765 | 273-276 | Protein | denotes | p65 |
| T15764 | 198-213 | Phosphorylation | denotes | phosphorylation |
| T15763 | 187-190 | Protein | denotes | p65 |
| T15762 | 153-161 | Protein | denotes | sTNFp55R |
| T15761 | 134-149 | Phosphorylation | denotes | phosphorylation |
| T15760 | 123-126 | Protein | denotes | p65 |
| T15759 | 109-119 | Negative_regulation | denotes | Inhibition |
| T15758 | 89-98 | Positive_regulation | denotes | following |
| T15757 | 52-67 | Phosphorylation | denotes | phosphorylation |
| T15756 | 41-44 | Protein | denotes | p65 |
| T15755 | 20-28 | Protein | denotes | sTNFp55R |
| T15754 | 700-706 | Protein | denotes | GLUT-1 |
| T15753 | 654-657 | Protein | denotes | p65 |
| T15752 | 617-624 | Protein | denotes | TNFp55R |
| T15751 | 577-584 | Protein | denotes | TNFp55R |
| T15750 | 546-549 | Protein | denotes | p65 |
| T15749 | 484-490 | Protein | denotes | GLUT-1 |
| R12120 | T15756 | T15757 | themeOf | p65,phosphorylation |
| R12121 | T15757 | T15758 | themeOf | phosphorylation,following |
| R12122 | T15760 | T15761 | themeOf | p65,phosphorylation |
| R12123 | T15761 | T15759 | themeOf | phosphorylation,Inhibition |
| R12124 | T15762 | T15759 | causeOf | sTNFp55R,Inhibition |
| R12125 | T15763 | T15764 | themeOf | p65,phosphorylation |
| R12126 | T15765 | T15766 | themeOf | p65,phosphorylation |
| R12127 | T15767 | T15768 | themeOf | p65,phosphorylation |
| R12128 | T15769 | T15770 | themeOf | p65,phosphorylation |
| R12129 | T15770 | T15771 | themeOf | phosphorylation,enhanced |
| R12130 | T15771 | T15773 | themeOf | enhanced,reduced |
| R12131 | T15772 | T15773 | themeOf | expression,reduced |
| R12132 | T15775 | T15776 | themeOf | p65,phosphorylation |
| R12133 | T15778 | T15779 | causeOf | sTNFp55R,reduces |
| R12134 | T15781 | T15779 | themeOf | expression,reduces |