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PMC:3312845 / 21-185 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T204 12-21 NN denotes threonine
T205 22-25 CD denotes 435
T206 26-41 NN denotes phosphorylation
T207 42-44 IN denotes of
T208 45-48 NN denotes p65
T209 49-56 JJ denotes nuclear
T210 57-66 NN denotes factor-κB
T211 67-74 NN denotes subunit
T212 75-77 IN denotes in
T213 78-89 JJ denotes endothelial
T214 90-95 NN denotes cells
T215 96-103 VB denotes induces
T216 104-113 JJ denotes vasogenic
T217 114-119 NN denotes edema
T218 120-123 CC denotes and
T219 124-134 NN denotes neutrophil
T220 135-147 NN denotes infiltration
T221 148-150 IN denotes in
T222 151-154 DT denotes the
T223 155-158 NN denotes rat
R38 T206 T204 arg1Of phosphorylation,threonine
R39 T206 T205 arg1Of phosphorylation,435
R40 T206 T207 arg1Of phosphorylation,of
R41 T206 T212 arg1Of phosphorylation,in
R42 T206 T215 arg1Of phosphorylation,induces
R43 T211 T207 arg2Of subunit,of
R44 T211 T208 arg1Of subunit,p65
R45 T211 T209 arg1Of subunit,nuclear
R46 T211 T210 arg1Of subunit,factor-κB
R47 T214 T212 arg2Of cells,in
R48 T214 T213 arg1Of cells,endothelial
R49 T215 T221 arg1Of induces,in
R50 T217 T216 arg1Of edema,vasogenic
R51 T217 T218 arg1Of edema,and
R52 T218 T215 arg2Of and,induces
R53 T220 T218 arg2Of infiltration,and
R54 T220 T219 arg1Of infiltration,neutrophil

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T146 45-48 Protein denotes p65

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T458 45-48 http://www.uniprot.org/uniprot/Q04206 denotes p65
T462 45-48 http://www.uniprot.org/uniprot/P21579 denotes p65

GO-BP

Id Subject Object Predicate Lexical cue
T169 26-41 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

GO-CC

Id Subject Object Predicate Lexical cue
T180 90-95 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

simple1

Id Subject Object Predicate Lexical cue
T186 45-48 Protein denotes p65

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T910 45-48 Protein denotes p65
T925 26-41 Phosphorylation denotes phosphorylation
R646 T910 T925 themeOf p65,phosphorylation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T766 26-41 Phosphorylation denotes phosphorylation
T767 3-11 Positive_regulation denotes mediated
T751 45-48 Protein denotes p65
R563 T766 T767 themeOf phosphorylation,mediated
R622 T751 T766 themeOf p65,phosphorylation

DLUT931

Id Subject Object Predicate Lexical cue
T793 45-48 Protein denotes p65
T808 26-41 Phosphorylation denotes phosphorylation
T809 96-103 Positive_regulation denotes induces
T810 3-11 Positive_regulation denotes mediated
R624 T793 T808 themeOf p65,phosphorylation
R632 T808 T809 themeOf phosphorylation,induces
R633 T808 T810 themeOf phosphorylation,mediated

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T938 12-25 Entity denotes threonine 435
T940 78-95 Entity denotes endothelial cells
T962 124-134 Entity denotes neutrophil

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T483 12-21 NN denotes threonine
T484 22-25 CD denotes 435
T485 26-41 NN denotes phosphorylation
T486 42-44 IN denotes of
T487 45-48 CD denotes p65
T488 49-56 JJ denotes nuclear
T489 57-66 JJ denotes factor-κB
T490 67-74 NN denotes subunit
T491 75-77 IN denotes in
T492 78-89 JJ denotes endothelial
T493 90-95 NNS denotes cells
T494 96-103 VBZ denotes induces
T495 104-113 JJ denotes vasogenic
T496 114-119 NN denotes edema
T497 120-123 CC denotes and
T498 124-134 NN denotes neutrophil
T499 135-147 NN denotes infiltration
T500 148-150 IN denotes in
T501 151-154 DT denotes the
T502 155-158 NN denotes rat
R289 T483 T494 nsubj threonine,induces
R290 T484 T485 nummod 435,phosphorylation
R291 T485 T483 appos phosphorylation,threonine
R292 T486 T485 prep of,phosphorylation
R293 T487 T490 nummod p65,subunit
R294 T488 T490 amod nuclear,subunit
R295 T489 T490 amod factor-κB,subunit
R296 T490 T486 pobj subunit,of
R297 T491 T485 prep in,phosphorylation
R298 T492 T493 amod endothelial,cells
R299 T493 T491 pobj cells,in
R300 T494 T494 ROOT induces,induces
R301 T495 T496 amod vasogenic,edema
R302 T496 T494 dobj edema,induces
R303 T497 T496 cc and,edema
R304 T498 T499 compound neutrophil,infiltration
R305 T499 T496 conj infiltration,edema
R306 T500 T494 prep in,induces

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T842 45-74 Protein denotes p65 nuclear factor-κB subunit
T843 26-41 Phosphorylation denotes phosphorylation
T844 96-103 Positive_regulation denotes induces
T845 3-11 Positive_regulation denotes mediated
R642 T842 T843 themeOf p65 nuclear factor-κB subunit,phosphorylation
R643 T843 T844 themeOf phosphorylation,induces
R644 T843 T845 themeOf phosphorylation,mediated

testone

Id Subject Object Predicate Lexical cue
T18 45-48 Protein denotes p65
T33 3-11 Positive_regulation denotes mediated
T34 26-41 Phosphorylation denotes phosphorylation
R2 T18 T34 themeOf p65,phosphorylation
R11 T34 T33 themeOf phosphorylation,mediated

test3

Id Subject Object Predicate Lexical cue
T50 45-48 Protein denotes p65
T66 3-11 Positive_regulation denotes mediated
T67 26-41 Phosphorylation denotes phosphorylation
T68 45-48 Protein denotes p65
R17 T67 T66 themeOf phosphorylation,mediated
R18 T68 T67 themeOf p65,phosphorylation