PMC:3312845 / 21-142
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T204 | 12-21 | NN | denotes | threonine |
| T205 | 22-25 | CD | denotes | 435 |
| T206 | 26-41 | NN | denotes | phosphorylation |
| T207 | 42-44 | IN | denotes | of |
| T208 | 45-48 | NN | denotes | p65 |
| T209 | 49-56 | JJ | denotes | nuclear |
| T210 | 57-66 | NN | denotes | factor-κB |
| T211 | 67-74 | NN | denotes | subunit |
| T212 | 75-77 | IN | denotes | in |
| T213 | 78-89 | JJ | denotes | endothelial |
| T214 | 90-95 | NN | denotes | cells |
| T215 | 96-103 | VB | denotes | induces |
| T216 | 104-113 | JJ | denotes | vasogenic |
| T217 | 114-119 | NN | denotes | edema |
| R38 | T206 | T204 | arg1Of | phosphorylation,threonine |
| R39 | T206 | T205 | arg1Of | phosphorylation,435 |
| R40 | T206 | T207 | arg1Of | phosphorylation,of |
| R41 | T206 | T212 | arg1Of | phosphorylation,in |
| R42 | T206 | T215 | arg1Of | phosphorylation,induces |
| R43 | T211 | T207 | arg2Of | subunit,of |
| R44 | T211 | T208 | arg1Of | subunit,p65 |
| R45 | T211 | T209 | arg1Of | subunit,nuclear |
| R46 | T211 | T210 | arg1Of | subunit,factor-κB |
| R47 | T214 | T212 | arg2Of | cells,in |
| R48 | T214 | T213 | arg1Of | cells,endothelial |
| R50 | T217 | T216 | arg1Of | edema,vasogenic |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T146 | 45-48 | Protein | denotes | p65 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T458 | 45-48 | http://www.uniprot.org/uniprot/Q04206 | denotes | p65 |
| T462 | 45-48 | http://www.uniprot.org/uniprot/P21579 | denotes | p65 |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T169 | 26-41 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T180 | 90-95 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T186 | 45-48 | Protein | denotes | p65 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T910 | 45-48 | Protein | denotes | p65 |
| T925 | 26-41 | Phosphorylation | denotes | phosphorylation |
| R646 | T910 | T925 | themeOf | p65,phosphorylation |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T766 | 26-41 | Phosphorylation | denotes | phosphorylation |
| T767 | 3-11 | Positive_regulation | denotes | mediated |
| T751 | 45-48 | Protein | denotes | p65 |
| R563 | T766 | T767 | themeOf | phosphorylation,mediated |
| R622 | T751 | T766 | themeOf | p65,phosphorylation |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T793 | 45-48 | Protein | denotes | p65 |
| T808 | 26-41 | Phosphorylation | denotes | phosphorylation |
| T809 | 96-103 | Positive_regulation | denotes | induces |
| T810 | 3-11 | Positive_regulation | denotes | mediated |
| R624 | T793 | T808 | themeOf | p65,phosphorylation |
| R632 | T808 | T809 | themeOf | phosphorylation,induces |
| R633 | T808 | T810 | themeOf | phosphorylation,mediated |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T938 | 12-25 | Entity | denotes | threonine 435 |
| T940 | 78-95 | Entity | denotes | endothelial cells |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T483 | 12-21 | NN | denotes | threonine |
| T484 | 22-25 | CD | denotes | 435 |
| T485 | 26-41 | NN | denotes | phosphorylation |
| T486 | 42-44 | IN | denotes | of |
| T487 | 45-48 | CD | denotes | p65 |
| T488 | 49-56 | JJ | denotes | nuclear |
| T489 | 57-66 | JJ | denotes | factor-κB |
| T490 | 67-74 | NN | denotes | subunit |
| T491 | 75-77 | IN | denotes | in |
| T492 | 78-89 | JJ | denotes | endothelial |
| T493 | 90-95 | NNS | denotes | cells |
| T494 | 96-103 | VBZ | denotes | induces |
| T495 | 104-113 | JJ | denotes | vasogenic |
| T496 | 114-119 | NN | denotes | edema |
| R289 | T483 | T494 | nsubj | threonine,induces |
| R290 | T484 | T485 | nummod | 435,phosphorylation |
| R291 | T485 | T483 | appos | phosphorylation,threonine |
| R292 | T486 | T485 | prep | of,phosphorylation |
| R293 | T487 | T490 | nummod | p65,subunit |
| R294 | T488 | T490 | amod | nuclear,subunit |
| R295 | T489 | T490 | amod | factor-κB,subunit |
| R296 | T490 | T486 | pobj | subunit,of |
| R297 | T491 | T485 | prep | in,phosphorylation |
| R298 | T492 | T493 | amod | endothelial,cells |
| R299 | T493 | T491 | pobj | cells,in |
| R300 | T494 | T494 | ROOT | induces,induces |
| R301 | T495 | T496 | amod | vasogenic,edema |
| R302 | T496 | T494 | dobj | edema,induces |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T842 | 45-74 | Protein | denotes | p65 nuclear factor-κB subunit |
| T843 | 26-41 | Phosphorylation | denotes | phosphorylation |
| T844 | 96-103 | Positive_regulation | denotes | induces |
| T845 | 3-11 | Positive_regulation | denotes | mediated |
| R642 | T842 | T843 | themeOf | p65 nuclear factor-κB subunit,phosphorylation |
| R643 | T843 | T844 | themeOf | phosphorylation,induces |
| R644 | T843 | T845 | themeOf | phosphorylation,mediated |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T18 | 45-48 | Protein | denotes | p65 |
| T33 | 3-11 | Positive_regulation | denotes | mediated |
| T34 | 26-41 | Phosphorylation | denotes | phosphorylation |
| R2 | T18 | T34 | themeOf | p65,phosphorylation |
| R11 | T34 | T33 | themeOf | phosphorylation,mediated |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T50 | 45-48 | Protein | denotes | p65 |
| T66 | 3-11 | Positive_regulation | denotes | mediated |
| T67 | 26-41 | Phosphorylation | denotes | phosphorylation |
| T68 | 45-48 | Protein | denotes | p65 |
| R17 | T67 | T66 | themeOf | phosphorylation,mediated |
| R18 | T68 | T67 | themeOf | p65,phosphorylation |