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PMC:3312845 / 19129-19409 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T14559 277-279 NN denotes μm
T14558 275-276 -RRB- denotes )
T14557 272-275 NN denotes A-D
T14556 271-272 -LRB- denotes (
T14555 268-270 CD denotes 25
T14554 266-267 SYM denotes =
T14553 262-265 NN denotes Bar
T14552 241-242 -RRB- denotes l
T14551 235-241 NN denotes ndothe
T14550 234-235 -LRB- denotes e
T14549 229-234 NN denotes l as
T14548 218-229 JJ denotes ytes as wel
T14547 216-218 IN denotes oc
T14546 212-216 RB denotes astr
T14545 210-212 RB denotes n
T14544 200-210 NN denotes pression i
T14543 198-200 IN denotes ex
T14542 188-198 NN denotes ) TNFp75R
T14541 181-188 NN denotes ). (C-D
T14540 180-181 -RRB- denotes s
T14539 177-180 JJ denotes row
T14538 176-177 -LRB- denotes r
T14537 175-176 -RRB- denotes a
T14536 169-175 NN denotes ytes (
T14535 168-169 -LRB- denotes c
T14534 158-168 NN denotes n in astro
T14533 156-158 IN denotes io
T14532 146-156 NN denotes 5R express
T14531 139-146 NN denotes ) TNFp5
T14530 138-139 -RRB- denotes B
T14529 137-138 NN denotes (
T14528 135-136 -LRB- denotes .
T14527 134-135 -RRB- denotes )
T14526 128-134 NN denotes arrows
T14525 127-128 -LRB- denotes (
T14524 117-126 NN denotes microglia
T14523 102-116 JJ denotes Ox-42-positive
T14522 99-101 IN denotes in
T14521 82-98 NN denotes immunoreactivity
T14520 76-81 NN denotes TNF-α
T14519 74-75 -RRB- denotes )
T14518 73-74 NN denotes A
T14517 72-73 -LRB- denotes (
T14516 68-71 NNP denotes SE.
T14515 60-67 JJ denotes hr-post
T14514 57-59 CD denotes 12
T14513 54-56 NN denotes PC
T14512 50-53 DT denotes the
T14511 47-49 IN denotes in
T14510 38-46 NN denotes receptor
T14509 34-37 NN denotes TNF
T14508 30-33 CC denotes and
T14507 24-29 NN denotes TNF-α
T14506 21-23 IN denotes of
T14505 10-20 NN denotes Expression
R11226 T14505 T14506 arg1Of Expression,of
R11227 T14505 T14511 arg1Of Expression,in
R11228 T14505 T14522 arg1Of Expression,in
R11229 T14507 T14508 arg1Of TNF-α,and
R11230 T14509 T14508 arg2Of TNF,and
R11231 T14510 T14506 arg2Of receptor,of
R11232 T14510 T14507 arg1Of receptor,TNF-α
R11233 T14510 T14509 arg1Of receptor,TNF
R11234 T14518 T14517 arg2Of A,(
R11235 T14519 T14517 arg3Of ),(
R11236 T14521 T14511 arg2Of immunoreactivity,in
R11237 T14521 T14512 arg1Of immunoreactivity,the
R11238 T14521 T14513 arg1Of immunoreactivity,PC
R11239 T14521 T14514 arg1Of immunoreactivity,12
R11240 T14521 T14515 arg1Of immunoreactivity,hr-post
R11241 T14521 T14516 arg1Of immunoreactivity,SE.
R11242 T14521 T14517 arg1Of immunoreactivity,(
R11243 T14521 T14520 arg1Of immunoreactivity,TNF-α
R11244 T14524 T14522 arg2Of microglia,in
R11245 T14524 T14523 arg1Of microglia,Ox-42-positive
R11246 T14524 T14525 arg1Of microglia,(
R11247 T14526 T14525 arg2Of arrows,(
R11248 T14527 T14525 arg3Of ),(
R11249 T14529 T14528 arg2Of (,.
R11250 T14530 T14528 arg3Of B,.
R11251 T14532 T14505 arg1Of 5R express,Expression
R11252 T14532 T14528 arg1Of 5R express,.
R11253 T14532 T14531 arg1Of 5R express,) TNFp5
R11254 T14532 T14533 arg1Of 5R express,io
R11255 T14532 T14543 arg1Of 5R express,ex
R11256 T14536 T14535 arg2Of ytes (,c
R11257 T14537 T14535 arg3Of a,c
R11258 T14539 T14538 arg2Of row,r
R11259 T14540 T14538 arg3Of s,r
R11260 T14542 T14533 arg2Of ) TNFp75R ,io
R11261 T14542 T14534 arg1Of ) TNFp75R ,n in astro
R11262 T14542 T14535 arg1Of ) TNFp75R ,c
R11263 T14542 T14538 arg1Of ) TNFp75R ,r
R11264 T14542 T14541 arg1Of ) TNFp75R ,). (C-D
R11265 T14544 T14547 arg1Of pression i,oc
R11266 T14547 T14543 arg2Of oc,ex
R11267 T14547 T14545 arg1Of oc,n
R11268 T14547 T14546 arg1Of oc,astr
R11269 T14549 T14547 arg2Of l as ,oc
R11270 T14549 T14548 arg1Of l as ,ytes as wel
R11271 T14549 T14550 arg1Of l as ,e
R11272 T14551 T14550 arg2Of ndothe,e
R11273 T14552 T14550 arg3Of l,e
R11274 T14557 T14556 arg2Of A-D,(
R11275 T14558 T14556 arg3Of ),(
R11276 T14559 T14553 arg1Of μm,Bar
R11277 T14559 T14554 arg1Of μm,=
R11278 T14559 T14555 arg1Of μm,25
R11279 T14559 T14556 arg1Of μm,(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T14499 190-197 Protein denotes TNFp75R
T14498 141-148 Protein denotes TNFp55R
T14497 76-81 Protein denotes TNF-α
T14496 24-29 Protein denotes TNF-α

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T14572 76-81 http://www.uniprot.org/uniprot/P01375 denotes TNF-α
T14571 24-29 http://www.uniprot.org/uniprot/P01375 denotes TNF-α
T14570 34-37 http://www.uniprot.org/uniprot/P01375 denotes TNF
T14569 24-27 http://www.uniprot.org/uniprot/P01375 denotes TNF

GO-CC

Id Subject Object Predicate Lexical cue
T14500 246-251 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T14489 262-280 Sentence denotes Bar = 25 (A-D) μm.
T14488 10-261 Sentence denotes Expression of TNF-α and TNF receptor in the PC 12 hr-post SE. (A) TNF-α immunoreactivity in Ox-42-positive microglia (arrows). (B) TNFp55R expression in astrocytes (arrows). (C-D) TNFp75R expression in astrocytes as well as endothelial cells (arrows).
T151 0-261 Sentence denotes Figure 1 Expression of TNF-α and TNF receptor in the PC 12 hr-post SE. (A) TNF-α immunoreactivity in Ox-42-positive microglia (arrows). (B) TNFp55R expression in astrocytes (arrows). (C-D) TNFp75R expression in astrocytes as well as endothelial cells (arrows).
T152 262-280 Sentence denotes Bar = 25 (A-D) μm.

simple1

Id Subject Object Predicate Lexical cue
T14504 190-197 Protein denotes TNFp75R
T14503 141-148 Protein denotes TNFp55R
T14502 76-81 Protein denotes TNF-α
T14501 24-29 Protein denotes TNF-α

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T14669 198-208 Gene_expression denotes expression
T14668 149-159 Gene_expression denotes expression
T14667 10-20 Gene_expression denotes Expression
T14666 190-197 Protein denotes TNFp75R
T14665 141-148 Protein denotes TNFp55R
T14664 76-81 Protein denotes TNF-α
T14663 24-29 Protein denotes TNF-α
R11357 T14663 T14667 themeOf TNF-α,Expression
R11358 T14665 T14668 themeOf TNFp55R,expression
R11359 T14666 T14669 themeOf TNFp75R,expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T14627 190-197 Protein denotes TNFp75R
T14626 141-148 Protein denotes TNFp55R
T14625 76-81 Protein denotes TNF-α
T14624 24-29 Protein denotes TNF-α
T14630 198-208 Gene_expression denotes expression
T14629 149-159 Gene_expression denotes expression
T14628 10-20 Gene_expression denotes Expression
R11340 T14624 T14628 themeOf TNF-α,Expression
R11341 T14626 T14629 themeOf TNFp55R,expression
R11342 T14627 T14630 themeOf TNFp75R,expression

DLUT931

Id Subject Object Predicate Lexical cue
T14637 198-208 Gene_expression denotes expression
T14636 149-159 Gene_expression denotes expression
T14635 10-20 Gene_expression denotes Expression
T14634 190-197 Protein denotes TNFp75R
T14633 141-148 Protein denotes TNFp55R
T14632 76-81 Protein denotes TNF-α
T14631 24-29 Protein denotes TNF-α
R11343 T14631 T14635 themeOf TNF-α,Expression
R11344 T14633 T14636 themeOf TNFp55R,expression
R11345 T14634 T14637 themeOf TNFp75R,expression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T14686 10-67 Gene_expression denotes Expression of TNF-α and TNF receptor in the PC 12 hr-post
T14685 10-67 Gene_expression denotes Expression of TNF-α and TNF receptor in the PC 12 hr-post
T14684 141-182 Gene_expression denotes TNFp55R expression in astrocytes (arrows)
T14683 190-260 Gene_expression denotes TNFp75R expression in astrocytes as well as endothelial cells (arrows)
T14682 141-148 Protein denotes TNFp55R
T14681 34-37 Protein denotes TNF
T14680 163-182 Entity denotes astrocytes (arrows)
T14679 54-56 Protein denotes PC
T14678 262-267 Entity denotes Bar =
T14677 234-260 Entity denotes endothelial cells (arrows)
T14676 76-81 Protein denotes TNF-α
T14675 190-197 Protein denotes TNFp75R
T14674 24-29 Protein denotes TNF-α
T14673 99-135 Entity denotes in Ox-42-positive microglia (arrows)
T14672 68-70 Protein denotes SE
T14671 34-46 Protein denotes TNF receptor
T14670 212-222 Entity denotes astrocytes
R11360 T14671 T14686 themeOf TNF receptor,Expression of TNF-α and TNF receptor in the PC 12 hr-post
R11361 T14674 T14685 themeOf TNF-α,Expression of TNF-α and TNF receptor in the PC 12 hr-post
R11362 T14675 T14683 themeOf TNFp75R,TNFp75R expression in astrocytes as well as endothelial cells (arrows)
R11363 T14682 T14684 themeOf TNFp55R,TNFp55R expression in astrocytes (arrows)

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T14623 279-280 . denotes .
T14622 277-279 NN denotes μm
T14621 275-276 -RRB- denotes )
T14620 272-275 NNP denotes A-D
T14619 271-272 -LRB- denotes (
T14618 268-270 CD denotes 25
T14617 266-267 SYM denotes =
T14616 262-265 NN denotes Bar
T14615 260-261 . denotes .
T14614 259-260 -RRB- denotes )
T14613 253-259 NNS denotes arrows
T14612 252-253 -LRB- denotes (
T14611 246-251 NNS denotes cells
T14610 234-245 JJ denotes endothelial
T14609 231-233 IN denotes as
T14608 226-230 RB denotes well
T14607 223-225 RB denotes as
T14606 212-222 NNS denotes astrocytes
T14605 209-211 IN denotes in
T14604 198-208 NN denotes expression
T14603 190-197 JJ denotes TNFp75R
T14602 188-189 -RRB- denotes )
T14601 185-188 NNP denotes C-D
T14600 184-185 -LRB- denotes (
T14599 182-183 . denotes .
T14598 181-182 -RRB- denotes )
T14597 175-181 NNS denotes arrows
T14596 174-175 -LRB- denotes (
T14595 163-173 NNS denotes astrocytes
T14594 160-162 IN denotes in
T14593 149-159 NN denotes expression
T14592 141-148 JJ denotes TNFp55R
T14591 139-140 -RRB- denotes )
T14590 138-139 NNP denotes B
T14589 137-138 -LRB- denotes (
T14588 135-136 . denotes .
T14587 134-135 -RRB- denotes )
T14586 128-134 NNS denotes arrows
T14585 127-128 -LRB- denotes (
T14584 117-126 NN denotes microglia
T14583 102-116 JJ denotes Ox-42-positive
T14582 99-101 IN denotes in
T14581 82-98 NN denotes immunoreactivity
T14580 76-81 JJ denotes TNF-α
T14579 74-75 -RRB- denotes )
T14578 73-74 NNP denotes A
T14577 72-73 -LRB- denotes (
T14576 70-71 . denotes .
T14575 68-70 NNP denotes SE
T14574 60-67 JJ denotes hr-post
T14567 50-53 DT denotes the
T14566 47-49 IN denotes in
T14565 38-46 NN denotes receptor
T14564 34-37 NNP denotes TNF
T14563 30-33 CC denotes and
T14562 24-29 NNP denotes TNF-α
T14561 21-23 IN denotes of
T14560 10-20 NN denotes Expression
T14568 54-56 NN denotes PC
T14573 57-59 CD denotes 12
R11280 T14560 T14560 ROOT Expression,Expression
R11281 T14561 T14560 prep of,Expression
R11282 T14562 T14561 pobj TNF-α,of
R11283 T14563 T14562 cc and,TNF-α
R11284 T14564 T14565 compound TNF,receptor
R11285 T14565 T14560 appos receptor,Expression
R11286 T14566 T14565 prep in,receptor
R11287 T14567 T14575 det the,SE
R11288 T14568 T14575 nmod PC,SE
R11289 T14573 T14574 nummod 12,hr-post
R11290 T14574 T14575 amod hr-post,SE
R11291 T14575 T14566 pobj SE,in
R11292 T14576 T14560 punct .,Expression
R11293 T14577 T14578 punct (,A
R11294 T14578 T14578 ROOT A,A
R11295 T14579 T14578 punct ),A
R11296 T14580 T14581 amod TNF-α,immunoreactivity
R11297 T14581 T14581 ROOT immunoreactivity,immunoreactivity
R11298 T14582 T14581 prep in,immunoreactivity
R11299 T14583 T14584 amod Ox-42-positive,microglia
R11300 T14584 T14582 pobj microglia,in
R11301 T14585 T14586 punct (,arrows
R11302 T14586 T14581 appos arrows,immunoreactivity
R11303 T14587 T14586 punct ),arrows
R11304 T14588 T14581 punct .,immunoreactivity
R11305 T14589 T14590 punct (,B
R11306 T14590 T14593 nmod B,expression
R11307 T14591 T14590 punct ),B
R11308 T14592 T14593 amod TNFp55R,expression
R11309 T14593 T14593 ROOT expression,expression
R11310 T14594 T14593 prep in,expression
R11311 T14595 T14594 pobj astrocytes,in
R11312 T14596 T14597 punct (,arrows
R11313 T14597 T14595 appos arrows,astrocytes
R11314 T14598 T14595 punct ),astrocytes
R11315 T14599 T14593 punct .,expression
R11316 T14600 T14601 punct (,C-D
R11317 T14601 T14604 nmod C-D,expression
R11318 T14602 T14601 punct ),C-D
R11319 T14603 T14604 amod TNFp75R,expression
R11320 T14604 T14604 ROOT expression,expression
R11321 T14605 T14604 prep in,expression
R11322 T14606 T14605 pobj astrocytes,in
R11323 T14607 T14609 advmod as,as
R11324 T14608 T14609 advmod well,as
R11325 T14609 T14604 cc as,expression
R11326 T14610 T14611 amod endothelial,cells
R11327 T14611 T14604 conj cells,expression
R11328 T14612 T14611 punct (,cells
R11329 T14613 T14611 appos arrows,cells
R11330 T14614 T14611 punct ),cells
R11331 T14615 T14604 punct .,expression
R11332 T14616 T14616 ROOT Bar,Bar
R11333 T14617 T14618 punct =,25
R11334 T14618 T14616 nummod 25,Bar
R11335 T14619 T14616 punct (,Bar
R11336 T14620 T14616 appos A-D,Bar
R11337 T14621 T14616 punct ),Bar
R11338 T14622 T14622 ROOT μm,μm
R11339 T14623 T14622 punct .,μm

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T14650 141-148 Protein denotes TNFp55R
T14649 76-81 Protein denotes TNF-α
T14648 10-20 Gene_expression denotes Expression
T14647 10-20 Gene_expression denotes Expression
T14646 34-46 Protein denotes TNF receptor
T14645 24-29 Protein denotes TNF-α
T14653 198-208 Gene_expression denotes expression
T14652 190-197 Protein denotes TNFp75R
T14651 149-159 Gene_expression denotes expression
R11349 T14645 T14647 themeOf TNF-α,Expression
R11350 T14646 T14648 themeOf TNF receptor,Expression
R11351 T14650 T14651 themeOf TNFp55R,expression
R11352 T14652 T14653 themeOf TNFp75R,expression

testone

Id Subject Object Predicate Lexical cue
T14477 198-208 Gene_expression denotes expression
T14476 108-116 Gene_expression denotes positive
T14475 10-20 Gene_expression denotes Expression
T14474 190-197 Protein denotes TNFp75R
T14473 141-148 Protein denotes TNFp55R
T14472 76-81 Protein denotes TNF-α
T14471 24-29 Protein denotes TNF-α
R11221 T14471 T14475 themeOf TNF-α,Expression
R11222 T14474 T14477 themeOf TNFp75R,expression

test3

Id Subject Object Predicate Lexical cue
T14487 190-197 Protein denotes TNFp75R
T14486 141-148 Protein denotes TNFp55R
T14485 108-116 Gene_expression denotes positive
T14484 76-81 Protein denotes TNF-α
T14483 24-29 Protein denotes TNF-α
T14482 10-20 Gene_expression denotes Expression
T14481 190-197 Protein denotes TNFp75R
T14480 141-148 Protein denotes TNFp55R
T14479 76-81 Protein denotes TNF-α
T14478 24-29 Protein denotes TNF-α
R11223 T14483 T14482 themeOf TNF-α,Expression