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PMC:3312845 / 1117-1222 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T380 98-100 DT denotes an
T379 97-98 -LRB- denotes (
T378 86-96 NN denotes expression
T377 79-85 NN denotes SMI-71
T376 76-78 IN denotes by
T375 64-75 VB denotes accompanied
T374 58-63 NN denotes cells
T373 46-57 JJ denotes endothelial
T372 43-45 IN denotes in
T371 33-42 VB denotes increased
T370 29-32 VB denotes was
T369 13-28 NN denotes phosphorylation
T368 2-12 NN denotes p65-Thr435
R196 T369 T368 arg1Of phosphorylation,p65-Thr435
R197 T369 T370 arg1Of phosphorylation,was
R198 T369 T371 arg2Of phosphorylation,increased
R201 T371 T370 arg2Of increased,was
R202 T371 T372 arg1Of increased,in
R203 T374 T372 arg2Of cells,in
R204 T374 T373 arg1Of cells,endothelial
R205 T374 T375 arg2Of cells,accompanied
R206 T378 T375 arg1Of expression,accompanied
R207 T378 T376 arg2Of expression,by
R208 T378 T377 arg1Of expression,SMI-71
R209 T378 T379 arg1Of expression,(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T153 2-5 Protein denotes p65

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T459 2-5 http://www.uniprot.org/uniprot/Q04206 denotes p65
T463 2-5 http://www.uniprot.org/uniprot/P21579 denotes p65

GO-BP

Id Subject Object Predicate Lexical cue
T170 13-28 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

GO-CC

Id Subject Object Predicate Lexical cue
T182 58-63 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

simple1

Id Subject Object Predicate Lexical cue
T193 2-5 Protein denotes p65

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T917 2-5 Protein denotes p65
T927 33-42 Positive_regulation denotes increased
T928 13-28 Phosphorylation denotes phosphorylation
R648 T917 T928 themeOf p65,phosphorylation
R651 T928 T927 themeOf phosphorylation,increased

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T758 2-5 Protein denotes p65
T770 33-42 Positive_regulation denotes increased
T769 13-28 Phosphorylation denotes phosphorylation
R557 T758 T769 themeOf p65,phosphorylation
R564 T769 T770 themeOf phosphorylation,increased

DLUT931

Id Subject Object Predicate Lexical cue
T800 2-5 Protein denotes p65
T812 13-28 Phosphorylation denotes phosphorylation
T813 33-42 Positive_regulation denotes increased
R626 T800 T812 themeOf p65,phosphorylation
R634 T812 T813 themeOf phosphorylation,increased

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T963 46-96 Entity denotes endothelial cells accompanied by SMI-71 expression
T939 2-12 Entity denotes p65-Thr435
T943 2-12 Protein denotes p65-Thr435
R656 T939 T943 partOf p65-Thr435,p65-Thr435

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T667 98-100 DT denotes an
T666 97-98 -LRB- denotes (
T665 86-96 NN denotes expression
T664 79-85 NNP denotes SMI-71
T663 76-78 IN denotes by
T662 64-75 VBN denotes accompanied
T661 58-63 NNS denotes cells
T660 46-57 JJ denotes endothelial
T659 43-45 IN denotes in
T658 33-42 VBN denotes increased
T657 29-32 VBD denotes was
T656 13-28 NN denotes phosphorylation
T655 2-12 JJ denotes p65-Thr435
R461 T655 T656 amod p65-Thr435,phosphorylation
R462 T656 T658 nsubjpass phosphorylation,increased
R463 T657 T658 auxpass was,increased
R464 T658 T658 ROOT increased,increased
R465 T659 T658 prep in,increased
R466 T660 T661 amod endothelial,cells
R467 T661 T659 pobj cells,in
R468 T662 T661 acl accompanied,cells
R469 T663 T662 agent by,accompanied
R470 T664 T665 compound SMI-71,expression
R471 T665 T663 pobj expression,by
R472 T666 T665 punct (,expression

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T859 33-42 Positive_regulation denotes increased
T858 33-42 Positive_regulation denotes increased
T857 13-28 Phosphorylation denotes phosphorylation
T856 13-28 Phosphorylation denotes phosphorylation
T855 6-12 Protein denotes Thr435
T854 2-5 Protein denotes p65
R569 T854 T856 themeOf p65,phosphorylation
R570 T855 T857 themeOf Thr435,phosphorylation
R571 T856 T858 themeOf phosphorylation,increased
R572 T857 T859 themeOf phosphorylation,increased

testone

Id Subject Object Predicate Lexical cue
T25 2-5 Protein denotes p65
T41 13-28 Phosphorylation denotes phosphorylation
T42 33-42 Positive_regulation denotes increased
T43 86-96 Gene_expression denotes expression
R5 T25 T41 themeOf p65,phosphorylation
R12 T41 T42 themeOf phosphorylation,increased
R13 T43 T42 causeOf expression,increased

test3

Id Subject Object Predicate Lexical cue
T81 86-96 Gene_expression denotes expression
T80 33-42 Positive_regulation denotes increased
T79 13-28 Phosphorylation denotes phosphorylation
T78 2-5 Protein denotes p65
T57 2-5 Protein denotes p65
R23 T78 T79 themeOf p65,phosphorylation
R24 T79 T80 themeOf phosphorylation,increased
R25 T81 T80 causeOf expression,increased