PMC:3312845 / 1065-1212
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T377 | 131-137 | NN | denotes | SMI-71 |
T376 | 128-130 | IN | denotes | by |
T375 | 116-127 | VB | denotes | accompanied |
T374 | 110-115 | NN | denotes | cells |
T373 | 98-109 | JJ | denotes | endothelial |
T372 | 95-97 | IN | denotes | in |
T371 | 85-94 | VB | denotes | increased |
T370 | 81-84 | VB | denotes | was |
T369 | 65-80 | NN | denotes | phosphorylation |
T368 | 54-64 | NN | denotes | p65-Thr435 |
T367 | 49-53 | RB | denotes | only |
T366 | 47-48 | -COMMA- | denotes | , |
T365 | 39-47 | NN | denotes | addition |
T364 | 36-38 | IN | denotes | In |
T363 | 24-34 | NN | denotes | astrocytes |
T362 | 21-23 | IN | denotes | as |
T361 | 16-20 | RB | denotes | well |
T360 | 13-15 | RB | denotes | as |
T359 | 7-12 | NN | denotes | cells |
R189 | T359 | T362 | arg1Of | cells,as |
R191 | T362 | T360 | arg1Of | as,as |
R192 | T362 | T361 | arg1Of | as,well |
R193 | T363 | T362 | arg2Of | astrocytes,as |
R194 | T365 | T364 | arg2Of | addition,In |
R195 | T369 | T367 | arg1Of | phosphorylation,only |
R196 | T369 | T368 | arg1Of | phosphorylation,p65-Thr435 |
R197 | T369 | T370 | arg1Of | phosphorylation,was |
R198 | T369 | T371 | arg2Of | phosphorylation,increased |
R199 | T371 | T364 | arg1Of | increased,In |
R200 | T371 | T366 | arg1Of | increased,"," |
R201 | T371 | T370 | arg2Of | increased,was |
R202 | T371 | T372 | arg1Of | increased,in |
R203 | T374 | T372 | arg2Of | cells,in |
R204 | T374 | T373 | arg1Of | cells,endothelial |
R205 | T374 | T375 | arg2Of | cells,accompanied |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T153 | 54-57 | Protein | denotes | p65 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T459 | 54-57 | http://www.uniprot.org/uniprot/Q04206 | denotes | p65 |
T463 | 54-57 | http://www.uniprot.org/uniprot/P21579 | denotes | p65 |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T170 | 65-80 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T181 | 7-12 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T182 | 110-115 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T193 | 54-57 | Protein | denotes | p65 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T917 | 54-57 | Protein | denotes | p65 |
T927 | 85-94 | Positive_regulation | denotes | increased |
T928 | 65-80 | Phosphorylation | denotes | phosphorylation |
R648 | T917 | T928 | themeOf | p65,phosphorylation |
R651 | T928 | T927 | themeOf | phosphorylation,increased |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T758 | 54-57 | Protein | denotes | p65 |
T770 | 85-94 | Positive_regulation | denotes | increased |
T769 | 65-80 | Phosphorylation | denotes | phosphorylation |
R557 | T758 | T769 | themeOf | p65,phosphorylation |
R564 | T769 | T770 | themeOf | phosphorylation,increased |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T800 | 54-57 | Protein | denotes | p65 |
T812 | 65-80 | Phosphorylation | denotes | phosphorylation |
T813 | 85-94 | Positive_regulation | denotes | increased |
R626 | T800 | T812 | themeOf | p65,phosphorylation |
R634 | T812 | T813 | themeOf | phosphorylation,increased |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T986 | 49-94 | Positive_regulation | denotes | only p65-Thr435 phosphorylation was increased |
T985 | 49-80 | Phosphorylation | denotes | only p65-Thr435 phosphorylation |
T939 | 54-64 | Entity | denotes | p65-Thr435 |
T943 | 54-64 | Protein | denotes | p65-Thr435 |
T951 | 24-34 | Entity | denotes | astrocytes |
R605 | T985 | T986 | themeOf | only p65-Thr435 phosphorylation,only p65-Thr435 phosphorylation was increased |
R656 | T939 | T943 | partOf | p65-Thr435,p65-Thr435 |
R657 | T939 | T985 | siteOf | p65-Thr435,only p65-Thr435 phosphorylation |
R658 | T943 | T985 | themeOf | p65-Thr435,only p65-Thr435 phosphorylation |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T664 | 131-137 | NNP | denotes | SMI-71 |
T663 | 128-130 | IN | denotes | by |
T662 | 116-127 | VBN | denotes | accompanied |
T661 | 110-115 | NNS | denotes | cells |
T660 | 98-109 | JJ | denotes | endothelial |
T659 | 95-97 | IN | denotes | in |
T658 | 85-94 | VBN | denotes | increased |
T657 | 81-84 | VBD | denotes | was |
T656 | 65-80 | NN | denotes | phosphorylation |
T655 | 54-64 | JJ | denotes | p65-Thr435 |
T654 | 49-53 | RB | denotes | only |
T653 | 47-48 | , | denotes | , |
T652 | 39-47 | NN | denotes | addition |
T651 | 36-38 | IN | denotes | In |
T650 | 34-35 | . | denotes | . |
T649 | 24-34 | NNS | denotes | astrocytes |
T648 | 21-23 | IN | denotes | as |
T647 | 16-20 | RB | denotes | well |
T646 | 13-15 | RB | denotes | as |
T645 | 7-12 | NNS | denotes | cells |
R453 | T647 | T648 | advmod | well,as |
R454 | T648 | T645 | cc | as,cells |
R455 | T649 | T645 | conj | astrocytes,cells |
R457 | T651 | T658 | prep | In,increased |
R458 | T652 | T651 | pobj | addition,In |
R459 | T653 | T658 | punct | ",",increased |
R452 | T646 | T648 | advmod | as,as |
R460 | T654 | T656 | advmod | only,phosphorylation |
R461 | T655 | T656 | amod | p65-Thr435,phosphorylation |
R462 | T656 | T658 | nsubjpass | phosphorylation,increased |
R463 | T657 | T658 | auxpass | was,increased |
R464 | T658 | T658 | ROOT | increased,increased |
R465 | T659 | T658 | prep | in,increased |
R466 | T660 | T661 | amod | endothelial,cells |
R467 | T661 | T659 | pobj | cells,in |
R468 | T662 | T661 | acl | accompanied,cells |
R469 | T663 | T662 | agent | by,accompanied |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T859 | 85-94 | Positive_regulation | denotes | increased |
T858 | 85-94 | Positive_regulation | denotes | increased |
T857 | 65-80 | Phosphorylation | denotes | phosphorylation |
T856 | 65-80 | Phosphorylation | denotes | phosphorylation |
T855 | 58-64 | Protein | denotes | Thr435 |
T854 | 54-57 | Protein | denotes | p65 |
R569 | T854 | T856 | themeOf | p65,phosphorylation |
R570 | T855 | T857 | themeOf | Thr435,phosphorylation |
R571 | T856 | T858 | themeOf | phosphorylation,increased |
R572 | T857 | T859 | themeOf | phosphorylation,increased |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25 | 54-57 | Protein | denotes | p65 |
T41 | 65-80 | Phosphorylation | denotes | phosphorylation |
T42 | 85-94 | Positive_regulation | denotes | increased |
R5 | T25 | T41 | themeOf | p65,phosphorylation |
R12 | T41 | T42 | themeOf | phosphorylation,increased |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T80 | 85-94 | Positive_regulation | denotes | increased |
T79 | 65-80 | Phosphorylation | denotes | phosphorylation |
T78 | 54-57 | Protein | denotes | p65 |
T57 | 54-57 | Protein | denotes | p65 |
R23 | T78 | T79 | themeOf | p65,phosphorylation |
R24 | T79 | T80 | themeOf | phosphorylation,increased |