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PMC:3312845 / 1041-1188 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T374 134-139 NN denotes cells
T373 122-133 JJ denotes endothelial
T372 119-121 IN denotes in
T371 109-118 VB denotes increased
T370 105-108 VB denotes was
T369 89-104 NN denotes phosphorylation
T368 78-88 NN denotes p65-Thr435
T367 73-77 RB denotes only
T366 71-72 -COMMA- denotes ,
T365 63-71 NN denotes addition
T364 60-62 IN denotes In
T363 48-58 NN denotes astrocytes
T362 45-47 IN denotes as
T361 40-44 RB denotes well
T360 37-39 RB denotes as
T359 31-36 NN denotes cells
T358 19-30 JJ denotes endothelial
T357 16-18 IN denotes in
T356 7-15 VB denotes detected
T355 3-6 VB denotes was
R186 T356 T355 arg2Of detected,was
R187 T356 T357 arg1Of detected,in
R188 T359 T358 arg1Of cells,endothelial
R189 T359 T362 arg1Of cells,as
R190 T362 T357 arg2Of as,in
R191 T362 T360 arg1Of as,as
R192 T362 T361 arg1Of as,well
R193 T363 T362 arg2Of astrocytes,as
R194 T365 T364 arg2Of addition,In
R195 T369 T367 arg1Of phosphorylation,only
R196 T369 T368 arg1Of phosphorylation,p65-Thr435
R197 T369 T370 arg1Of phosphorylation,was
R198 T369 T371 arg2Of phosphorylation,increased
R199 T371 T364 arg1Of increased,In
R200 T371 T366 arg1Of increased,","
R201 T371 T370 arg2Of increased,was
R202 T371 T372 arg1Of increased,in
R203 T374 T372 arg2Of cells,in
R204 T374 T373 arg1Of cells,endothelial

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T153 78-81 Protein denotes p65

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T459 78-81 http://www.uniprot.org/uniprot/Q04206 denotes p65
T463 78-81 http://www.uniprot.org/uniprot/P21579 denotes p65

GO-BP

Id Subject Object Predicate Lexical cue
T170 89-104 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

GO-CC

Id Subject Object Predicate Lexical cue
T181 31-36 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T182 134-139 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

simple1

Id Subject Object Predicate Lexical cue
T193 78-81 Protein denotes p65

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T917 78-81 Protein denotes p65
T927 109-118 Positive_regulation denotes increased
T928 89-104 Phosphorylation denotes phosphorylation
R648 T917 T928 themeOf p65,phosphorylation
R651 T928 T927 themeOf phosphorylation,increased

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T758 78-81 Protein denotes p65
T770 109-118 Positive_regulation denotes increased
T769 89-104 Phosphorylation denotes phosphorylation
R557 T758 T769 themeOf p65,phosphorylation
R564 T769 T770 themeOf phosphorylation,increased

DLUT931

Id Subject Object Predicate Lexical cue
T800 78-81 Protein denotes p65
T812 89-104 Phosphorylation denotes phosphorylation
T813 109-118 Positive_regulation denotes increased
R626 T800 T812 themeOf p65,phosphorylation
R634 T812 T813 themeOf phosphorylation,increased

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T986 73-118 Positive_regulation denotes only p65-Thr435 phosphorylation was increased
T985 73-104 Phosphorylation denotes only p65-Thr435 phosphorylation
T978 19-58 Entity denotes endothelial cells as well as astrocytes
T939 78-88 Entity denotes p65-Thr435
T943 78-88 Protein denotes p65-Thr435
T951 48-58 Entity denotes astrocytes
R605 T985 T986 themeOf only p65-Thr435 phosphorylation,only p65-Thr435 phosphorylation was increased
R656 T939 T943 partOf p65-Thr435,p65-Thr435
R657 T939 T985 siteOf p65-Thr435,only p65-Thr435 phosphorylation
R658 T943 T985 themeOf p65-Thr435,only p65-Thr435 phosphorylation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T661 134-139 NNS denotes cells
T660 122-133 JJ denotes endothelial
T659 119-121 IN denotes in
T658 109-118 VBN denotes increased
T657 105-108 VBD denotes was
T656 89-104 NN denotes phosphorylation
T655 78-88 JJ denotes p65-Thr435
T654 73-77 RB denotes only
T653 71-72 , denotes ,
T652 63-71 NN denotes addition
T651 60-62 IN denotes In
T650 58-59 . denotes .
T649 48-58 NNS denotes astrocytes
T648 45-47 IN denotes as
T647 40-44 RB denotes well
T646 37-39 RB denotes as
T645 31-36 NNS denotes cells
T644 19-30 JJ denotes endothelial
T643 16-18 IN denotes in
T642 7-15 VBN denotes detected
T641 3-6 VBD denotes was
R453 T647 T648 advmod well,as
R454 T648 T645 cc as,cells
R455 T649 T645 conj astrocytes,cells
R456 T650 T642 punct .,detected
R457 T651 T658 prep In,increased
R458 T652 T651 pobj addition,In
R459 T653 T658 punct ",",increased
R447 T641 T642 auxpass was,detected
R448 T642 T642 ROOT detected,detected
R449 T643 T642 prep in,detected
R450 T644 T645 amod endothelial,cells
R451 T645 T643 pobj cells,in
R452 T646 T648 advmod as,as
R460 T654 T656 advmod only,phosphorylation
R461 T655 T656 amod p65-Thr435,phosphorylation
R462 T656 T658 nsubjpass phosphorylation,increased
R463 T657 T658 auxpass was,increased
R464 T658 T658 ROOT increased,increased
R465 T659 T658 prep in,increased
R466 T660 T661 amod endothelial,cells
R467 T661 T659 pobj cells,in

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T859 109-118 Positive_regulation denotes increased
T858 109-118 Positive_regulation denotes increased
T857 89-104 Phosphorylation denotes phosphorylation
T856 89-104 Phosphorylation denotes phosphorylation
T855 82-88 Protein denotes Thr435
T854 78-81 Protein denotes p65
R569 T854 T856 themeOf p65,phosphorylation
R570 T855 T857 themeOf Thr435,phosphorylation
R571 T856 T858 themeOf phosphorylation,increased
R572 T857 T859 themeOf phosphorylation,increased

testone

Id Subject Object Predicate Lexical cue
T25 78-81 Protein denotes p65
T41 89-104 Phosphorylation denotes phosphorylation
T42 109-118 Positive_regulation denotes increased
R5 T25 T41 themeOf p65,phosphorylation
R12 T41 T42 themeOf phosphorylation,increased

test3

Id Subject Object Predicate Lexical cue
T80 109-118 Positive_regulation denotes increased
T79 89-104 Phosphorylation denotes phosphorylation
T78 78-81 Protein denotes p65
T57 78-81 Protein denotes p65
R23 T78 T79 themeOf p65,phosphorylation
R24 T79 T80 themeOf phosphorylation,increased