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PMC:3312845 / 0-89 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T201 0-5 NN denotes Tumor
T202 6-14 NN denotes necrosis
T203 15-32 JJ denotes factor-α-mediated
T204 33-42 NN denotes threonine
T205 43-46 CD denotes 435
T206 47-62 NN denotes phosphorylation
T207 63-65 IN denotes of
T208 66-69 NN denotes p65
T209 70-77 JJ denotes nuclear
T210 78-87 NN denotes factor-κB
R35 T203 T201 arg1Of factor-α-mediated,Tumor
R36 T203 T202 arg1Of factor-α-mediated,necrosis
R37 T206 T203 arg1Of phosphorylation,factor-α-mediated
R38 T206 T204 arg1Of phosphorylation,threonine
R39 T206 T205 arg1Of phosphorylation,435
R40 T206 T207 arg1Of phosphorylation,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T145 0-23 Protein denotes Tumor necrosis factor-α
T146 66-69 Protein denotes p65

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T458 66-69 http://www.uniprot.org/uniprot/Q04206 denotes p65
T462 66-69 http://www.uniprot.org/uniprot/P21579 denotes p65

GO-BP

Id Subject Object Predicate Lexical cue
T165 6-14 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T167 6-14 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T169 47-62 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T161 6-14 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis
T163 6-14 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis

simple1

Id Subject Object Predicate Lexical cue
T185 0-23 Protein denotes Tumor necrosis factor-α
T186 66-69 Protein denotes p65

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T909 0-23 Protein denotes Tumor necrosis factor-α
T910 66-69 Protein denotes p65
T925 47-62 Phosphorylation denotes phosphorylation
R646 T910 T925 themeOf p65,phosphorylation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T766 47-62 Phosphorylation denotes phosphorylation
T767 24-32 Positive_regulation denotes mediated
T750 0-23 Protein denotes Tumor necrosis factor-α
T751 66-69 Protein denotes p65
R563 T766 T767 themeOf phosphorylation,mediated
R622 T751 T766 themeOf p65,phosphorylation

DLUT931

Id Subject Object Predicate Lexical cue
T792 0-23 Protein denotes Tumor necrosis factor-α
T793 66-69 Protein denotes p65
T808 47-62 Phosphorylation denotes phosphorylation
T810 24-32 Positive_regulation denotes mediated
R623 T792 T810 causeOf Tumor necrosis factor-α,mediated
R624 T793 T808 themeOf p65,phosphorylation
R633 T808 T810 themeOf phosphorylation,mediated

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T935 0-23 Protein denotes Tumor necrosis factor-α
T938 33-46 Entity denotes threonine 435

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T480 0-5 NN denotes Tumor
T481 6-14 NN denotes necrosis
T482 15-32 JJ denotes factor-α-mediated
T483 33-42 NN denotes threonine
T484 43-46 CD denotes 435
T485 47-62 NN denotes phosphorylation
T486 63-65 IN denotes of
T487 66-69 CD denotes p65
T488 70-77 JJ denotes nuclear
T489 78-87 JJ denotes factor-κB
R288 T482 T483 amod factor-α-mediated,threonine
R290 T484 T485 nummod 435,phosphorylation
R291 T485 T483 appos phosphorylation,threonine
R292 T486 T485 prep of,phosphorylation

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T841 0-23 Protein denotes Tumor necrosis factor-α
T843 47-62 Phosphorylation denotes phosphorylation
T845 24-32 Positive_regulation denotes mediated
R644 T843 T845 themeOf phosphorylation,mediated
R645 T845 T841 Cause mediated,Tumor necrosis factor-α

testone

Id Subject Object Predicate Lexical cue
T17 0-23 Protein denotes Tumor necrosis factor-α
T18 66-69 Protein denotes p65
T33 24-32 Positive_regulation denotes mediated
T34 47-62 Phosphorylation denotes phosphorylation
R1 T17 T33 causeOf Tumor necrosis factor-α,mediated
R2 T18 T34 themeOf p65,phosphorylation
R11 T34 T33 themeOf phosphorylation,mediated

test3

Id Subject Object Predicate Lexical cue
T49 0-23 Protein denotes Tumor necrosis factor-α
T50 66-69 Protein denotes p65
T65 0-23 Protein denotes Tumor necrosis factor-α
T66 24-32 Positive_regulation denotes mediated
T67 47-62 Phosphorylation denotes phosphorylation
T68 66-69 Protein denotes p65
R16 T65 T66 causeOf Tumor necrosis factor-α,mediated
R17 T67 T66 themeOf phosphorylation,mediated
R18 T68 T67 themeOf p65,phosphorylation