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PMC:3312845 / 0-743 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T201 0-5 NN denotes Tumor
T202 6-14 NN denotes necrosis
T203 15-32 JJ denotes factor-α-mediated
T204 33-42 NN denotes threonine
T205 43-46 CD denotes 435
T206 47-62 NN denotes phosphorylation
T207 63-65 IN denotes of
T208 66-69 NN denotes p65
T209 70-77 JJ denotes nuclear
T210 78-87 NN denotes factor-κB
T211 88-95 NN denotes subunit
T212 96-98 IN denotes in
T213 99-110 JJ denotes endothelial
T214 111-116 NN denotes cells
T215 117-124 VB denotes induces
T216 125-134 JJ denotes vasogenic
T217 135-140 NN denotes edema
T218 141-144 CC denotes and
T219 145-155 NN denotes neutrophil
T220 156-168 NN denotes infiltration
T221 169-171 IN denotes in
T222 172-175 DT denotes the
T223 176-179 NN denotes rat
T224 180-188 NN denotes piriform
T225 189-195 NN denotes cortex
T226 196-205 VB denotes following
T227 206-212 NN denotes status
T228 213-224 NN denotes epilepticus
T282 551-556 NN denotes edema
T309 742-743 -COMMA- denotes ,
T308 735-742 NN denotes saline-
T307 730-734 IN denotes with
T306 722-729 VB denotes infused
T305 696-721 RB denotes intracerebroventricularly
T304 691-695 VB denotes were
T303 686-690 WDT denotes that
T302 681-685 NN denotes rats
T301 678-680 IN denotes in
T300 666-677 NN denotes pilocarpine
T299 663-665 IN denotes by
T298 655-662 VB denotes induced
T297 651-654 VB denotes was
T296 648-650 NN denotes SE
T295 640-647 NN denotes Methods
T294 635-637 NN denotes SE
T293 615-634 JJ denotes pilocarpine-induced
T292 612-614 IN denotes by
T291 603-611 VB denotes provoked
T290 596-602 NN denotes models
T289 587-595 NN denotes epilepsy
T288 583-586 NN denotes rat
T287 580-582 IN denotes in
T286 573-579 NN denotes events
T285 565-572 JJ denotes related
T284 561-564 PRP-DOLLAR- denotes its
T283 557-560 CC denotes and
T281 541-550 JJ denotes vasogenic
T280 534-540 IN denotes during
T279 523-533 NN denotes disruption
T278 521-522 -RRB- denotes )
T277 518-521 NN denotes BBB
T276 517-518 -LRB- denotes (
T275 509-516 NN denotes barrier
T274 497-508 NN denotes blood-brain
T273 494-496 IN denotes in
T272 491-493 NN denotes -α
T271 490-491 -RRB- denotes )
T270 487-490 NN denotes TNF
T269 486-487 -LRB- denotes (
T268 479-485 NN denotes factor
T267 470-478 NN denotes necrosis
T266 464-469 NN denotes tumor
T265 461-463 IN denotes of
T264 455-460 NN denotes roles
T263 451-454 DT denotes the
T262 438-450 VB denotes investigated
T261 435-437 PRP denotes we
T260 433-434 -COMMA- denotes ,
T259 428-433 NN denotes edema
T258 418-427 JJ denotes vasogenic
T257 407-417 JJ denotes SE-induced
T256 404-406 IN denotes of
T255 394-403 NN denotes mechanism
T254 390-393 DT denotes the
T253 380-389 VB denotes elucidate
T252 377-379 TO denotes To
T251 368-375 NN denotes damages
T250 357-367 JJ denotes astroglial
T249 353-356 CC denotes and
T248 344-352 JJ denotes neuronal
T247 341-343 IN denotes by
T246 329-340 VB denotes accompanied
T245 327-328 -RRB- denotes )
T244 325-327 NN denotes PC
T243 324-325 -LRB- denotes (
T242 317-323 NN denotes cortex
T241 308-316 NN denotes piriform
T240 304-307 DT denotes the
T239 301-303 IN denotes in
T238 295-300 NN denotes edema
T237 285-294 JJ denotes vasogenic
T236 278-284 JJ denotes severe
T235 270-277 VB denotes induces
T234 268-269 -RRB- denotes )
T233 266-268 NN denotes SE
T232 265-266 -LRB- denotes (
T231 253-264 NN denotes epilepticus
T230 246-252 NN denotes Status
T229 235-245 NN denotes Background
R35 T203 T201 arg1Of factor-α-mediated,Tumor
R36 T203 T202 arg1Of factor-α-mediated,necrosis
R37 T206 T203 arg1Of phosphorylation,factor-α-mediated
R38 T206 T204 arg1Of phosphorylation,threonine
R39 T206 T205 arg1Of phosphorylation,435
R40 T206 T207 arg1Of phosphorylation,of
R41 T206 T212 arg1Of phosphorylation,in
R42 T206 T215 arg1Of phosphorylation,induces
R43 T211 T207 arg2Of subunit,of
R44 T211 T208 arg1Of subunit,p65
R45 T211 T209 arg1Of subunit,nuclear
R46 T211 T210 arg1Of subunit,factor-κB
R47 T214 T212 arg2Of cells,in
R48 T214 T213 arg1Of cells,endothelial
R49 T215 T221 arg1Of induces,in
R50 T217 T216 arg1Of edema,vasogenic
R51 T217 T218 arg1Of edema,and
R52 T218 T215 arg2Of and,induces
R53 T220 T218 arg2Of infiltration,and
R54 T220 T219 arg1Of infiltration,neutrophil
R55 T225 T221 arg2Of cortex,in
R56 T225 T222 arg1Of cortex,the
R57 T225 T223 arg1Of cortex,rat
R58 T225 T224 arg1Of cortex,piriform
R59 T225 T226 arg1Of cortex,following
R60 T228 T226 arg2Of epilepticus,following
R61 T228 T227 arg1Of epilepticus,status
R62 T231 T230 arg1Of epilepticus,Status
R63 T231 T232 arg1Of epilepticus,(
R64 T231 T235 arg1Of epilepticus,induces
R65 T233 T232 arg2Of SE,(
R66 T234 T232 arg3Of ),(
R67 T235 T239 arg1Of induces,in
R68 T238 T235 arg2Of edema,induces
R69 T238 T236 arg1Of edema,severe
R70 T238 T237 arg1Of edema,vasogenic
R71 T242 T239 arg2Of cortex,in
R72 T242 T240 arg1Of cortex,the
R73 T242 T241 arg1Of cortex,piriform
R74 T242 T243 arg1Of cortex,(
R75 T242 T246 arg2Of cortex,accompanied
R76 T244 T243 arg2Of PC,(
R77 T245 T243 arg3Of ),(
R78 T248 T249 arg1Of neuronal,and
R79 T250 T249 arg2Of astroglial,and
R80 T251 T246 arg1Of damages,accompanied
R81 T251 T247 arg2Of damages,by
R82 T251 T248 arg1Of damages,neuronal
R83 T251 T250 arg1Of damages,astroglial
R84 T253 T252 arg1Of elucidate,To
R85 T255 T253 arg2Of mechanism,elucidate
R86 T255 T254 arg1Of mechanism,the
R87 T255 T256 arg1Of mechanism,of
R88 T259 T256 arg2Of edema,of
R89 T259 T257 arg1Of edema,SE-induced
R90 T259 T258 arg1Of edema,vasogenic
R91 T261 T253 arg1Of we,elucidate
R92 T261 T262 arg1Of we,investigated
R93 T262 T252 modOf investigated,To
R94 T262 T260 arg1Of investigated,","
R95 T262 T280 arg1Of investigated,during
R96 T262 T287 arg1Of investigated,in
R97 T264 T262 arg2Of roles,investigated
R98 T264 T263 arg1Of roles,the
R99 T264 T265 arg1Of roles,of
R100 T268 T266 arg1Of factor,tumor
R101 T268 T267 arg1Of factor,necrosis
R102 T268 T269 arg1Of factor,(
R103 T270 T269 arg2Of TNF,(
R104 T271 T269 arg3Of ),(
R105 T272 T265 arg2Of -α,of
R106 T272 T268 arg1Of -α,factor
R107 T272 T273 arg1Of -α,in
R108 T275 T274 arg1Of barrier,blood-brain
R109 T275 T276 arg1Of barrier,(
R110 T277 T276 arg2Of BBB,(
R111 T278 T276 arg3Of ),(
R112 T279 T273 arg2Of disruption,in
R113 T279 T275 arg1Of disruption,barrier
R114 T282 T281 arg1Of edema,vasogenic
R115 T282 T283 arg1Of edema,and
R116 T283 T280 arg2Of and,during
R117 T286 T283 arg2Of events,and
R118 T286 T284 arg1Of events,its
R119 T286 T285 arg1Of events,related
R120 T290 T287 arg2Of models,in
R121 T290 T288 arg1Of models,rat
R122 T290 T289 arg1Of models,epilepsy
R123 T290 T291 arg2Of models,provoked
R124 T294 T291 arg1Of SE,provoked
R125 T294 T292 arg2Of SE,by
R126 T294 T293 arg1Of SE,pilocarpine-induced
R127 T296 T297 arg1Of SE,was
R128 T296 T298 arg2Of SE,induced
R129 T298 T297 arg2Of induced,was
R130 T300 T301 arg1Of pilocarpine,in
R132 T302 T301 arg2Of rats,in
R133 T302 T303 arg1Of rats,that
R134 T302 T304 arg1Of rats,were
R135 T302 T306 arg2Of rats,infused
R136 T306 T304 arg2Of infused,were
R137 T306 T305 arg1Of infused,intracerebroventricularly
R138 T306 T307 arg1Of infused,with
R139 T308 T307 arg2Of saline-,with

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T145 0-23 Protein denotes Tumor necrosis factor-α
T146 66-69 Protein denotes p65
T147 464-493 Protein denotes tumor necrosis factor (TNF)-α

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T466 487-490 http://www.uniprot.org/uniprot/P01375 denotes TNF
T473 487-493 http://www.uniprot.org/uniprot/P01375 denotes TNF)-α
T458 66-69 http://www.uniprot.org/uniprot/Q04206 denotes p65
T462 66-69 http://www.uniprot.org/uniprot/P21579 denotes p65

UBERON-AE

Id Subject Object Predicate Lexical cue
T94 180-195 http://purl.obolibrary.org/obo/UBERON_0004725 denotes piriform cortex
T96 189-195 http://purl.obolibrary.org/obo/UBERON_0001851 denotes cortex
T95 308-323 http://purl.obolibrary.org/obo/UBERON_0004725 denotes piriform cortex
T97 317-323 http://purl.obolibrary.org/obo/UBERON_0001851 denotes cortex
T98 497-502 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T99 497-516 http://purl.obolibrary.org/obo/UBERON_0000120 denotes blood-brain barrier
T100 503-508 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain

GO-BP

Id Subject Object Predicate Lexical cue
T165 6-14 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T167 6-14 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T169 47-62 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T166 470-478 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T168 470-478 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T162 470-478 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis
T164 470-478 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis
T161 6-14 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis
T163 6-14 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis

GO-CC

Id Subject Object Predicate Lexical cue
T180 111-116 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T106 640-647 Sentence denotes Methods
T105 377-638 Sentence denotes To elucidate the mechanism of SE-induced vasogenic edema, we investigated the roles of tumor necrosis factor (TNF)-α in blood-brain barrier (BBB) disruption during vasogenic edema and its related events in rat epilepsy models provoked by pilocarpine-induced SE.
T104 246-376 Sentence denotes Status epilepticus (SE) induces severe vasogenic edema in the piriform cortex (PC) accompanied by neuronal and astroglial damages.
T103 235-245 Sentence denotes Background
T102 0-224 Sentence denotes Tumor necrosis factor-α-mediated threonine 435 phosphorylation of p65 nuclear factor-κB subunit in endothelial cells induces vasogenic edema and neutrophil infiltration in the rat piriform cortex following status epilepticus
T1 0-224 Sentence denotes Tumor necrosis factor-α-mediated threonine 435 phosphorylation of p65 nuclear factor-κB subunit in endothelial cells induces vasogenic edema and neutrophil infiltration in the rat piriform cortex following status epilepticus
T2 226-234 Sentence denotes Abstract
T3 235-245 Sentence denotes Background
T4 246-376 Sentence denotes Status epilepticus (SE) induces severe vasogenic edema in the piriform cortex (PC) accompanied by neuronal and astroglial damages.
T5 377-638 Sentence denotes To elucidate the mechanism of SE-induced vasogenic edema, we investigated the roles of tumor necrosis factor (TNF)-α in blood-brain barrier (BBB) disruption during vasogenic edema and its related events in rat epilepsy models provoked by pilocarpine-induced SE.
T6 640-647 Sentence denotes Methods

ICD10

Id Subject Object Predicate Lexical cue
T174 206-224 http://purl.bioontology.org/ontology/ICD10/G41.9 denotes status epilepticus
T176 206-224 http://purl.bioontology.org/ontology/ICD10/G41 denotes status epilepticus
T175 246-264 http://purl.bioontology.org/ontology/ICD10/G41.9 denotes Status epilepticus
T177 246-264 http://purl.bioontology.org/ontology/ICD10/G41 denotes Status epilepticus
T178 587-595 http://purl.bioontology.org/ontology/ICD10/G40.9 denotes epilepsy
T179 587-595 http://purl.bioontology.org/ontology/ICD10/G40 denotes epilepsy

simple1

Id Subject Object Predicate Lexical cue
T185 0-23 Protein denotes Tumor necrosis factor-α
T186 66-69 Protein denotes p65
T187 464-493 Protein denotes tumor necrosis factor (TNF)-α

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T911 464-493 Protein denotes tumor necrosis factor (TNF)-α
T909 0-23 Protein denotes Tumor necrosis factor-α
T910 66-69 Protein denotes p65
T925 47-62 Phosphorylation denotes phosphorylation
R646 T910 T925 themeOf p65,phosphorylation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T766 47-62 Phosphorylation denotes phosphorylation
T767 24-32 Positive_regulation denotes mediated
T752 464-493 Protein denotes tumor necrosis factor (TNF)-α
T750 0-23 Protein denotes Tumor necrosis factor-α
T751 66-69 Protein denotes p65
R563 T766 T767 themeOf phosphorylation,mediated
R622 T751 T766 themeOf p65,phosphorylation

DLUT931

Id Subject Object Predicate Lexical cue
T794 464-493 Protein denotes tumor necrosis factor (TNF)-α
T792 0-23 Protein denotes Tumor necrosis factor-α
T793 66-69 Protein denotes p65
T808 47-62 Phosphorylation denotes phosphorylation
T809 117-124 Positive_regulation denotes induces
T810 24-32 Positive_regulation denotes mediated
R623 T792 T810 causeOf Tumor necrosis factor-α,mediated
R624 T793 T808 themeOf p65,phosphorylation
R632 T808 T809 themeOf phosphorylation,induces
R633 T808 T810 themeOf phosphorylation,mediated

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T987 0-116 Regulation denotes Tumor necrosis factor-α-mediated threonine 435 phosphorylation of p65 nuclear factor-κB subunit in endothelial cells
T989 648-743 Positive_regulation denotes SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-,
T988 648-743 Gene_expression denotes SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-,
T974 407-417 Entity denotes SE-induced
T970 325-327 Protein denotes PC
T967 266-268 Entity denotes SE
T966 663-677 Entity denotes by pilocarpine
T933 648-650 Protein denotes SE
T934 612-637 Entity denotes by pilocarpine-induced SE
T958 615-634 Entity denotes pilocarpine-induced
T959 461-493 Protein denotes of tumor necrosis factor (TNF)-α
T935 0-23 Protein denotes Tumor necrosis factor-α
T938 33-46 Entity denotes threonine 435
T940 99-116 Entity denotes endothelial cells
T962 145-155 Entity denotes neutrophil
R601 T966 T989 causeOf by pilocarpine,"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-,"
R653 T933 T988 themeOf SE,"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-,"
R654 T933 T989 themeOf SE,"SE was induced by pilocarpine in rats that were intracerebroventricularly infused with saline-,"
R655 T935 T987 causeOf Tumor necrosis factor-α,Tumor necrosis factor-α-mediated threonine 435 phosphorylation of p65 nuclear factor-κB subunit in endothelial cells

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T480 0-5 NN denotes Tumor
T481 6-14 NN denotes necrosis
T482 15-32 JJ denotes factor-α-mediated
T483 33-42 NN denotes threonine
T484 43-46 CD denotes 435
T485 47-62 NN denotes phosphorylation
T486 63-65 IN denotes of
T487 66-69 CD denotes p65
T488 70-77 JJ denotes nuclear
T489 78-87 JJ denotes factor-κB
T490 88-95 NN denotes subunit
T491 96-98 IN denotes in
T492 99-110 JJ denotes endothelial
T493 111-116 NNS denotes cells
T494 117-124 VBZ denotes induces
T495 125-134 JJ denotes vasogenic
T496 135-140 NN denotes edema
T497 141-144 CC denotes and
T498 145-155 NN denotes neutrophil
T499 156-168 NN denotes infiltration
T500 169-171 IN denotes in
T501 172-175 DT denotes the
T502 176-179 NN denotes rat
T503 180-188 NN denotes piriform
T504 189-195 NN denotes cortex
T505 196-205 VBG denotes following
T506 206-212 NN denotes status
T507 213-224 NN denotes epilepticus
T575 635-637 NNP denotes SE
T574 615-634 JJ denotes pilocarpine-induced
T573 612-614 IN denotes by
T572 603-611 VBN denotes provoked
T571 596-602 NNS denotes models
T570 587-595 NN denotes epilepsy
T569 583-586 NN denotes rat
T568 580-582 IN denotes in
T567 573-579 NNS denotes events
T566 565-572 JJ denotes related
T565 561-564 PRP$ denotes its
T564 557-560 CC denotes and
T563 551-556 NN denotes edema
T562 541-550 JJ denotes vasogenic
T561 534-540 IN denotes during
T560 523-533 NN denotes disruption
T559 521-522 -RRB- denotes )
T558 518-521 NNP denotes BBB
T557 517-518 -LRB- denotes (
T556 509-516 NN denotes barrier
T555 497-508 JJ denotes blood-brain
T554 494-496 IN denotes in
T553 492-493 NN denotes α
T552 491-492 : denotes -
T551 490-491 -RRB- denotes )
T550 487-490 NNP denotes TNF
T549 486-487 -LRB- denotes (
T548 479-485 NN denotes factor
T547 470-478 NN denotes necrosis
T546 464-469 NN denotes tumor
T545 461-463 IN denotes of
T544 455-460 NNS denotes roles
T543 451-454 DT denotes the
T542 438-450 VBD denotes investigated
T541 435-437 PRP denotes we
T540 433-434 , denotes ,
T539 428-433 NN denotes edema
T538 418-427 JJ denotes vasogenic
T537 407-417 JJ denotes SE-induced
T536 404-406 IN denotes of
T535 394-403 NN denotes mechanism
T534 390-393 DT denotes the
T533 380-389 VB denotes elucidate
T532 377-379 TO denotes To
T531 375-376 . denotes .
T530 368-375 NNS denotes damages
T529 357-367 JJ denotes astroglial
T528 353-356 CC denotes and
T527 344-352 JJ denotes neuronal
T526 341-343 IN denotes by
T525 329-340 VBN denotes accompanied
T524 327-328 -RRB- denotes )
T523 325-327 NN denotes PC
T522 324-325 -LRB- denotes (
T521 317-323 NN denotes cortex
T520 308-316 NN denotes piriform
T519 304-307 DT denotes the
T518 301-303 IN denotes in
T517 295-300 NN denotes edema
T516 285-294 JJ denotes vasogenic
T515 278-284 JJ denotes severe
T514 270-277 VBZ denotes induces
T513 268-269 -RRB- denotes )
T512 266-268 FW denotes SE
T511 265-266 -LRB- denotes (
T510 253-264 NN denotes epilepticus
T509 246-252 NNP denotes Status
T508 235-245 NNP denotes Background
T592 742-743 , denotes ,
T591 741-742 : denotes -
T590 735-741 NN denotes saline
T589 730-734 IN denotes with
T588 722-729 VBN denotes infused
T587 696-721 RB denotes intracerebroventricularly
T586 691-695 VBD denotes were
T585 686-690 WDT denotes that
T584 681-685 NNS denotes rats
T583 678-680 IN denotes in
T582 666-677 NN denotes pilocarpine
T581 663-665 IN denotes by
T580 655-662 VBN denotes induced
T579 651-654 VBD denotes was
T578 648-650 NNP denotes SE
T577 640-647 NNP denotes Methods
T576 637-638 . denotes .
R286 T480 T494 nsubj Tumor,induces
R287 T481 T494 dep necrosis,induces
R288 T482 T483 amod factor-α-mediated,threonine
R289 T483 T494 nsubj threonine,induces
R290 T484 T485 nummod 435,phosphorylation
R291 T485 T483 appos phosphorylation,threonine
R292 T486 T485 prep of,phosphorylation
R293 T487 T490 nummod p65,subunit
R294 T488 T490 amod nuclear,subunit
R295 T489 T490 amod factor-κB,subunit
R296 T490 T486 pobj subunit,of
R297 T491 T485 prep in,phosphorylation
R298 T492 T493 amod endothelial,cells
R299 T493 T491 pobj cells,in
R300 T494 T494 ROOT induces,induces
R301 T495 T496 amod vasogenic,edema
R302 T496 T494 dobj edema,induces
R303 T497 T496 cc and,edema
R304 T498 T499 compound neutrophil,infiltration
R305 T499 T496 conj infiltration,edema
R306 T500 T494 prep in,induces
R307 T501 T514 det the,induces
R308 T502 T503 compound rat,piriform
R309 T503 T504 compound piriform,cortex
R310 T504 T505 advmod cortex,following
R311 T505 T507 amod following,epilepticus
R312 T506 T507 compound status,epilepticus
R313 T507 T514 nsubj epilepticus,induces
R314 T508 T509 compound Background,Status
R315 T509 T510 compound Status,epilepticus
R316 T510 T507 appos epilepticus,epilepticus
R317 T511 T512 punct (,SE
R318 T512 T510 appos SE,epilepticus
R319 T513 T510 punct ),epilepticus
R320 T514 T494 conj induces,induces
R321 T515 T517 amod severe,edema
R322 T516 T517 amod vasogenic,edema
R323 T517 T514 dobj edema,induces
R324 T518 T514 prep in,induces
R325 T519 T521 det the,cortex
R326 T520 T521 compound piriform,cortex
R327 T521 T518 pobj cortex,in
R328 T522 T521 punct (,cortex
R329 T523 T521 appos PC,cortex
R330 T524 T521 punct ),cortex
R331 T525 T514 advcl accompanied,induces
R332 T526 T525 agent by,accompanied
R333 T527 T530 amod neuronal,damages
R334 T528 T527 cc and,neuronal
R335 T529 T527 conj astroglial,neuronal
R336 T530 T526 pobj damages,by
R337 T531 T494 punct .,induces
R338 T532 T533 aux To,elucidate
R339 T533 T542 advcl elucidate,investigated
R340 T534 T535 det the,mechanism
R341 T535 T533 dobj mechanism,elucidate
R342 T536 T535 prep of,mechanism
R343 T537 T539 amod SE-induced,edema
R344 T538 T539 amod vasogenic,edema
R345 T539 T536 pobj edema,of
R346 T540 T542 punct ",",investigated
R347 T541 T542 nsubj we,investigated
R348 T542 T542 ROOT investigated,investigated
R349 T543 T544 det the,roles
R350 T544 T542 dobj roles,investigated
R351 T545 T544 prep of,roles
R352 T546 T547 compound tumor,necrosis
R353 T547 T548 compound necrosis,factor
R354 T548 T545 pobj factor,of
R355 T549 T550 punct (,TNF
R356 T550 T548 appos TNF,factor
R357 T551 T550 punct ),TNF
R358 T552 T553 punct -,α
R359 T553 T544 conj α,roles
R360 T554 T553 prep in,α
R361 T555 T556 amod blood-brain,barrier
R362 T556 T554 pobj barrier,in
R363 T557 T558 punct (,BBB
R364 T558 T553 appos BBB,α
R365 T559 T553 punct ),α
R366 T560 T542 npadvmod disruption,investigated
R367 T561 T560 prep during,disruption
R368 T562 T563 amod vasogenic,edema
R369 T563 T561 pobj edema,during
R370 T564 T563 cc and,edema
R371 T565 T567 poss its,events
R372 T566 T567 amod related,events
R373 T567 T563 conj events,edema
R374 T568 T567 prep in,events
R375 T569 T571 compound rat,models
R376 T570 T571 compound epilepsy,models
R377 T571 T568 pobj models,in
R378 T572 T571 acl provoked,models
R379 T573 T572 agent by,provoked
R380 T574 T575 amod pilocarpine-induced,SE
R381 T575 T573 pobj SE,by
R382 T576 T542 punct .,investigated
R383 T577 T578 compound Methods,SE
R384 T578 T580 nsubjpass SE,induced
R385 T579 T580 auxpass was,induced
R386 T580 T580 ROOT induced,induced
R387 T581 T580 agent by,induced
R388 T582 T581 pobj pilocarpine,by
R389 T583 T580 prep in,induced
R390 T584 T583 pobj rats,in
R391 T585 T588 nsubjpass that,infused
R392 T586 T588 auxpass were,infused
R393 T587 T588 advmod intracerebroventricularly,infused
R394 T588 T584 relcl infused,rats
R395 T589 T588 prep with,infused
R396 T590 T589 pobj saline,with
R397 T591 T590 punct -,saline
R398 T592 T590 punct ",",saline

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T846 464-493 Protein denotes tumor necrosis factor (TNF)-α
T841 0-23 Protein denotes Tumor necrosis factor-α
T842 66-95 Protein denotes p65 nuclear factor-κB subunit
T843 47-62 Phosphorylation denotes phosphorylation
T844 117-124 Positive_regulation denotes induces
T845 24-32 Positive_regulation denotes mediated
R642 T842 T843 themeOf p65 nuclear factor-κB subunit,phosphorylation
R643 T843 T844 themeOf phosphorylation,induces
R644 T843 T845 themeOf phosphorylation,mediated
R645 T845 T841 Cause mediated,Tumor necrosis factor-α

testone

Id Subject Object Predicate Lexical cue
T17 0-23 Protein denotes Tumor necrosis factor-α
T18 66-69 Protein denotes p65
T33 24-32 Positive_regulation denotes mediated
T34 47-62 Phosphorylation denotes phosphorylation
T19 464-493 Protein denotes tumor necrosis factor (TNF)-α
T35 523-533 Negative_regulation denotes disruption
T36 627-634 Positive_regulation denotes induced
T37 655-662 Positive_regulation denotes induced
R1 T17 T33 causeOf Tumor necrosis factor-α,mediated
R2 T18 T34 themeOf p65,phosphorylation
R11 T34 T33 themeOf phosphorylation,mediated

test3

Id Subject Object Predicate Lexical cue
T49 0-23 Protein denotes Tumor necrosis factor-α
T50 66-69 Protein denotes p65
T65 0-23 Protein denotes Tumor necrosis factor-α
T66 24-32 Positive_regulation denotes mediated
T67 47-62 Phosphorylation denotes phosphorylation
T68 66-69 Protein denotes p65
T51 464-493 Protein denotes tumor necrosis factor (TNF)-α
T69 464-493 Protein denotes tumor necrosis factor (TNF)-α
T70 655-662 Positive_regulation denotes induced
R16 T65 T66 causeOf Tumor necrosis factor-α,mediated
R17 T67 T66 themeOf phosphorylation,mediated
R18 T68 T67 themeOf p65,phosphorylation