PMC:3312845 / 0-248
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T201 | 0-5 | NN | denotes | Tumor |
T202 | 6-14 | NN | denotes | necrosis |
T203 | 15-32 | JJ | denotes | factor-α-mediated |
T204 | 33-42 | NN | denotes | threonine |
T205 | 43-46 | CD | denotes | 435 |
T206 | 47-62 | NN | denotes | phosphorylation |
T207 | 63-65 | IN | denotes | of |
T208 | 66-69 | NN | denotes | p65 |
T209 | 70-77 | JJ | denotes | nuclear |
T210 | 78-87 | NN | denotes | factor-κB |
T211 | 88-95 | NN | denotes | subunit |
T212 | 96-98 | IN | denotes | in |
T213 | 99-110 | JJ | denotes | endothelial |
T214 | 111-116 | NN | denotes | cells |
T215 | 117-124 | VB | denotes | induces |
T216 | 125-134 | JJ | denotes | vasogenic |
T217 | 135-140 | NN | denotes | edema |
T218 | 141-144 | CC | denotes | and |
T219 | 145-155 | NN | denotes | neutrophil |
T220 | 156-168 | NN | denotes | infiltration |
T221 | 169-171 | IN | denotes | in |
T222 | 172-175 | DT | denotes | the |
T223 | 176-179 | NN | denotes | rat |
T224 | 180-188 | NN | denotes | piriform |
T225 | 189-195 | NN | denotes | cortex |
T226 | 196-205 | VB | denotes | following |
T227 | 206-212 | NN | denotes | status |
T228 | 213-224 | NN | denotes | epilepticus |
T229 | 235-245 | NN | denotes | Background |
R35 | T203 | T201 | arg1Of | factor-α-mediated,Tumor |
R36 | T203 | T202 | arg1Of | factor-α-mediated,necrosis |
R37 | T206 | T203 | arg1Of | phosphorylation,factor-α-mediated |
R38 | T206 | T204 | arg1Of | phosphorylation,threonine |
R39 | T206 | T205 | arg1Of | phosphorylation,435 |
R40 | T206 | T207 | arg1Of | phosphorylation,of |
R41 | T206 | T212 | arg1Of | phosphorylation,in |
R42 | T206 | T215 | arg1Of | phosphorylation,induces |
R43 | T211 | T207 | arg2Of | subunit,of |
R44 | T211 | T208 | arg1Of | subunit,p65 |
R45 | T211 | T209 | arg1Of | subunit,nuclear |
R46 | T211 | T210 | arg1Of | subunit,factor-κB |
R47 | T214 | T212 | arg2Of | cells,in |
R48 | T214 | T213 | arg1Of | cells,endothelial |
R49 | T215 | T221 | arg1Of | induces,in |
R50 | T217 | T216 | arg1Of | edema,vasogenic |
R51 | T217 | T218 | arg1Of | edema,and |
R52 | T218 | T215 | arg2Of | and,induces |
R53 | T220 | T218 | arg2Of | infiltration,and |
R54 | T220 | T219 | arg1Of | infiltration,neutrophil |
R55 | T225 | T221 | arg2Of | cortex,in |
R56 | T225 | T222 | arg1Of | cortex,the |
R57 | T225 | T223 | arg1Of | cortex,rat |
R58 | T225 | T224 | arg1Of | cortex,piriform |
R59 | T225 | T226 | arg1Of | cortex,following |
R60 | T228 | T226 | arg2Of | epilepticus,following |
R61 | T228 | T227 | arg1Of | epilepticus,status |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T145 | 0-23 | Protein | denotes | Tumor necrosis factor-α |
T146 | 66-69 | Protein | denotes | p65 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T458 | 66-69 | http://www.uniprot.org/uniprot/Q04206 | denotes | p65 |
T462 | 66-69 | http://www.uniprot.org/uniprot/P21579 | denotes | p65 |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T94 | 180-195 | http://purl.obolibrary.org/obo/UBERON_0004725 | denotes | piriform cortex |
T96 | 189-195 | http://purl.obolibrary.org/obo/UBERON_0001851 | denotes | cortex |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T165 | 6-14 | http://purl.obolibrary.org/obo/GO_0019835 | denotes | necrosis |
T167 | 6-14 | http://purl.obolibrary.org/obo/GO_0070265 | denotes | necrosis |
T169 | 47-62 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
T161 | 6-14 | http://purl.obolibrary.org/obo/GO_0001906 | denotes | necrosis |
T163 | 6-14 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | necrosis |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T180 | 111-116 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T103 | 235-245 | Sentence | denotes | Background |
T102 | 0-224 | Sentence | denotes | Tumor necrosis factor-α-mediated threonine 435 phosphorylation of p65 nuclear factor-κB subunit in endothelial cells induces vasogenic edema and neutrophil infiltration in the rat piriform cortex following status epilepticus |
T1 | 0-224 | Sentence | denotes | Tumor necrosis factor-α-mediated threonine 435 phosphorylation of p65 nuclear factor-κB subunit in endothelial cells induces vasogenic edema and neutrophil infiltration in the rat piriform cortex following status epilepticus |
T2 | 226-234 | Sentence | denotes | Abstract |
T3 | 235-245 | Sentence | denotes | Background |
ICD10
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T174 | 206-224 | http://purl.bioontology.org/ontology/ICD10/G41.9 | denotes | status epilepticus |
T176 | 206-224 | http://purl.bioontology.org/ontology/ICD10/G41 | denotes | status epilepticus |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T185 | 0-23 | Protein | denotes | Tumor necrosis factor-α |
T186 | 66-69 | Protein | denotes | p65 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T909 | 0-23 | Protein | denotes | Tumor necrosis factor-α |
T910 | 66-69 | Protein | denotes | p65 |
T925 | 47-62 | Phosphorylation | denotes | phosphorylation |
R646 | T910 | T925 | themeOf | p65,phosphorylation |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T766 | 47-62 | Phosphorylation | denotes | phosphorylation |
T767 | 24-32 | Positive_regulation | denotes | mediated |
T750 | 0-23 | Protein | denotes | Tumor necrosis factor-α |
T751 | 66-69 | Protein | denotes | p65 |
R563 | T766 | T767 | themeOf | phosphorylation,mediated |
R622 | T751 | T766 | themeOf | p65,phosphorylation |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T792 | 0-23 | Protein | denotes | Tumor necrosis factor-α |
T793 | 66-69 | Protein | denotes | p65 |
T808 | 47-62 | Phosphorylation | denotes | phosphorylation |
T809 | 117-124 | Positive_regulation | denotes | induces |
T810 | 24-32 | Positive_regulation | denotes | mediated |
R623 | T792 | T810 | causeOf | Tumor necrosis factor-α,mediated |
R624 | T793 | T808 | themeOf | p65,phosphorylation |
R632 | T808 | T809 | themeOf | phosphorylation,induces |
R633 | T808 | T810 | themeOf | phosphorylation,mediated |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T987 | 0-116 | Regulation | denotes | Tumor necrosis factor-α-mediated threonine 435 phosphorylation of p65 nuclear factor-κB subunit in endothelial cells |
T935 | 0-23 | Protein | denotes | Tumor necrosis factor-α |
T938 | 33-46 | Entity | denotes | threonine 435 |
T940 | 99-116 | Entity | denotes | endothelial cells |
T962 | 145-155 | Entity | denotes | neutrophil |
R655 | T935 | T987 | causeOf | Tumor necrosis factor-α,Tumor necrosis factor-α-mediated threonine 435 phosphorylation of p65 nuclear factor-κB subunit in endothelial cells |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T480 | 0-5 | NN | denotes | Tumor |
T481 | 6-14 | NN | denotes | necrosis |
T482 | 15-32 | JJ | denotes | factor-α-mediated |
T483 | 33-42 | NN | denotes | threonine |
T484 | 43-46 | CD | denotes | 435 |
T485 | 47-62 | NN | denotes | phosphorylation |
T486 | 63-65 | IN | denotes | of |
T487 | 66-69 | CD | denotes | p65 |
T488 | 70-77 | JJ | denotes | nuclear |
T489 | 78-87 | JJ | denotes | factor-κB |
T490 | 88-95 | NN | denotes | subunit |
T491 | 96-98 | IN | denotes | in |
T492 | 99-110 | JJ | denotes | endothelial |
T493 | 111-116 | NNS | denotes | cells |
T494 | 117-124 | VBZ | denotes | induces |
T495 | 125-134 | JJ | denotes | vasogenic |
T496 | 135-140 | NN | denotes | edema |
T497 | 141-144 | CC | denotes | and |
T498 | 145-155 | NN | denotes | neutrophil |
T499 | 156-168 | NN | denotes | infiltration |
T500 | 169-171 | IN | denotes | in |
T501 | 172-175 | DT | denotes | the |
T502 | 176-179 | NN | denotes | rat |
T503 | 180-188 | NN | denotes | piriform |
T504 | 189-195 | NN | denotes | cortex |
T505 | 196-205 | VBG | denotes | following |
T506 | 206-212 | NN | denotes | status |
T507 | 213-224 | NN | denotes | epilepticus |
T508 | 235-245 | NNP | denotes | Background |
R286 | T480 | T494 | nsubj | Tumor,induces |
R287 | T481 | T494 | dep | necrosis,induces |
R288 | T482 | T483 | amod | factor-α-mediated,threonine |
R289 | T483 | T494 | nsubj | threonine,induces |
R290 | T484 | T485 | nummod | 435,phosphorylation |
R291 | T485 | T483 | appos | phosphorylation,threonine |
R292 | T486 | T485 | prep | of,phosphorylation |
R293 | T487 | T490 | nummod | p65,subunit |
R294 | T488 | T490 | amod | nuclear,subunit |
R295 | T489 | T490 | amod | factor-κB,subunit |
R296 | T490 | T486 | pobj | subunit,of |
R297 | T491 | T485 | prep | in,phosphorylation |
R298 | T492 | T493 | amod | endothelial,cells |
R299 | T493 | T491 | pobj | cells,in |
R300 | T494 | T494 | ROOT | induces,induces |
R301 | T495 | T496 | amod | vasogenic,edema |
R302 | T496 | T494 | dobj | edema,induces |
R303 | T497 | T496 | cc | and,edema |
R304 | T498 | T499 | compound | neutrophil,infiltration |
R305 | T499 | T496 | conj | infiltration,edema |
R306 | T500 | T494 | prep | in,induces |
R308 | T502 | T503 | compound | rat,piriform |
R309 | T503 | T504 | compound | piriform,cortex |
R310 | T504 | T505 | advmod | cortex,following |
R311 | T505 | T507 | amod | following,epilepticus |
R312 | T506 | T507 | compound | status,epilepticus |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T841 | 0-23 | Protein | denotes | Tumor necrosis factor-α |
T842 | 66-95 | Protein | denotes | p65 nuclear factor-κB subunit |
T843 | 47-62 | Phosphorylation | denotes | phosphorylation |
T844 | 117-124 | Positive_regulation | denotes | induces |
T845 | 24-32 | Positive_regulation | denotes | mediated |
R642 | T842 | T843 | themeOf | p65 nuclear factor-κB subunit,phosphorylation |
R643 | T843 | T844 | themeOf | phosphorylation,induces |
R644 | T843 | T845 | themeOf | phosphorylation,mediated |
R645 | T845 | T841 | Cause | mediated,Tumor necrosis factor-α |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17 | 0-23 | Protein | denotes | Tumor necrosis factor-α |
T18 | 66-69 | Protein | denotes | p65 |
T33 | 24-32 | Positive_regulation | denotes | mediated |
T34 | 47-62 | Phosphorylation | denotes | phosphorylation |
R1 | T17 | T33 | causeOf | Tumor necrosis factor-α,mediated |
R2 | T18 | T34 | themeOf | p65,phosphorylation |
R11 | T34 | T33 | themeOf | phosphorylation,mediated |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T49 | 0-23 | Protein | denotes | Tumor necrosis factor-α |
T50 | 66-69 | Protein | denotes | p65 |
T65 | 0-23 | Protein | denotes | Tumor necrosis factor-α |
T66 | 24-32 | Positive_regulation | denotes | mediated |
T67 | 47-62 | Phosphorylation | denotes | phosphorylation |
T68 | 66-69 | Protein | denotes | p65 |
R16 | T65 | T66 | causeOf | Tumor necrosis factor-α,mediated |
R17 | T67 | T66 | themeOf | phosphorylation,mediated |
R18 | T68 | T67 | themeOf | p65,phosphorylation |