PMC:3312845 / 0-109 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3312845","sourcedb":"PMC","sourceid":"3312845","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3312845","text":"Tumor necrosis factor-α-mediated threonine 435 phosphorylation of p65 nuclear factor-κB subunit in endothelia","tracks":[{"project":"pmc-enju-pas","denotations":[{"id":"T201","span":{"begin":0,"end":5},"obj":"NN"},{"id":"T202","span":{"begin":6,"end":14},"obj":"NN"},{"id":"T203","span":{"begin":15,"end":32},"obj":"JJ"},{"id":"T204","span":{"begin":33,"end":42},"obj":"NN"},{"id":"T205","span":{"begin":43,"end":46},"obj":"CD"},{"id":"T206","span":{"begin":47,"end":62},"obj":"NN"},{"id":"T207","span":{"begin":63,"end":65},"obj":"IN"},{"id":"T208","span":{"begin":66,"end":69},"obj":"NN"},{"id":"T209","span":{"begin":70,"end":77},"obj":"JJ"},{"id":"T210","span":{"begin":78,"end":87},"obj":"NN"},{"id":"T211","span":{"begin":88,"end":95},"obj":"NN"},{"id":"T212","span":{"begin":96,"end":98},"obj":"IN"}],"relations":[{"id":"R35","pred":"arg1Of","subj":"T203","obj":"T201"},{"id":"R36","pred":"arg1Of","subj":"T203","obj":"T202"},{"id":"R37","pred":"arg1Of","subj":"T206","obj":"T203"},{"id":"R38","pred":"arg1Of","subj":"T206","obj":"T204"},{"id":"R39","pred":"arg1Of","subj":"T206","obj":"T205"},{"id":"R40","pred":"arg1Of","subj":"T206","obj":"T207"},{"id":"R41","pred":"arg1Of","subj":"T206","obj":"T212"},{"id":"R43","pred":"arg2Of","subj":"T211","obj":"T207"},{"id":"R44","pred":"arg1Of","subj":"T211","obj":"T208"},{"id":"R45","pred":"arg1Of","subj":"T211","obj":"T209"},{"id":"R46","pred":"arg1Of","subj":"T211","obj":"T210"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T201","pred":"source","obj":"pmc-enju-pas"},{"subj":"T202","pred":"source","obj":"pmc-enju-pas"},{"subj":"T203","pred":"source","obj":"pmc-enju-pas"},{"subj":"T204","pred":"source","obj":"pmc-enju-pas"},{"subj":"T205","pred":"source","obj":"pmc-enju-pas"},{"subj":"T206","pred":"source","obj":"pmc-enju-pas"},{"subj":"T207","pred":"source","obj":"pmc-enju-pas"},{"subj":"T208","pred":"source","obj":"pmc-enju-pas"},{"subj":"T209","pred":"source","obj":"pmc-enju-pas"},{"subj":"T210","pred":"source","obj":"pmc-enju-pas"},{"subj":"T211","pred":"source","obj":"pmc-enju-pas"},{"subj":"T212","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T145","span":{"begin":0,"end":23},"obj":"Protein"},{"id":"T146","span":{"begin":66,"end":69},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T145","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"},{"subj":"T146","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T458","span":{"begin":66,"end":69},"obj":"http://www.uniprot.org/uniprot/Q04206"},{"id":"T462","span":{"begin":66,"end":69},"obj":"http://www.uniprot.org/uniprot/P21579"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T458","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T462","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"GO-BP","denotations":[{"id":"T165","span":{"begin":6,"end":14},"obj":"http://purl.obolibrary.org/obo/GO_0019835"},{"id":"T167","span":{"begin":6,"end":14},"obj":"http://purl.obolibrary.org/obo/GO_0070265"},{"id":"T169","span":{"begin":47,"end":62},"obj":"http://purl.obolibrary.org/obo/GO_0016310"},{"id":"T161","span":{"begin":6,"end":14},"obj":"http://purl.obolibrary.org/obo/GO_0001906"},{"id":"T163","span":{"begin":6,"end":14},"obj":"http://purl.obolibrary.org/obo/GO_0008219"}],"attributes":[{"subj":"T165","pred":"source","obj":"GO-BP"},{"subj":"T167","pred":"source","obj":"GO-BP"},{"subj":"T169","pred":"source","obj":"GO-BP"},{"subj":"T161","pred":"source","obj":"GO-BP"},{"subj":"T163","pred":"source","obj":"GO-BP"}]},{"project":"simple1","denotations":[{"id":"T185","span":{"begin":0,"end":23},"obj":"Protein"},{"id":"T186","span":{"begin":66,"end":69},"obj":"Protein"}],"attributes":[{"subj":"T185","pred":"source","obj":"simple1"},{"subj":"T186","pred":"source","obj":"simple1"}]},{"project":"BioNLP16_DUT","denotations":[{"id":"T909","span":{"begin":0,"end":23},"obj":"Protein"},{"id":"T910","span":{"begin":66,"end":69},"obj":"Protein"},{"id":"T925","span":{"begin":47,"end":62},"obj":"Phosphorylation"}],"relations":[{"id":"R646","pred":"themeOf","subj":"T910","obj":"T925"}],"attributes":[{"subj":"T909","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T910","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T925","pred":"source","obj":"BioNLP16_DUT"}]},{"project":"BioNLP16_Messiy","denotations":[{"id":"T766","span":{"begin":47,"end":62},"obj":"Phosphorylation"},{"id":"T767","span":{"begin":24,"end":32},"obj":"Positive_regulation"},{"id":"T750","span":{"begin":0,"end":23},"obj":"Protein"},{"id":"T751","span":{"begin":66,"end":69},"obj":"Protein"}],"relations":[{"id":"R563","pred":"themeOf","subj":"T766","obj":"T767"},{"id":"R622","pred":"themeOf","subj":"T751","obj":"T766"}],"attributes":[{"subj":"T766","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T767","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T750","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T751","pred":"source","obj":"BioNLP16_Messiy"}]},{"project":"DLUT931","denotations":[{"id":"T792","span":{"begin":0,"end":23},"obj":"Protein"},{"id":"T793","span":{"begin":66,"end":69},"obj":"Protein"},{"id":"T808","span":{"begin":47,"end":62},"obj":"Phosphorylation"},{"id":"T810","span":{"begin":24,"end":32},"obj":"Positive_regulation"}],"relations":[{"id":"R623","pred":"causeOf","subj":"T792","obj":"T810"},{"id":"R624","pred":"themeOf","subj":"T793","obj":"T808"},{"id":"R633","pred":"themeOf","subj":"T808","obj":"T810"}],"attributes":[{"subj":"T792","pred":"source","obj":"DLUT931"},{"subj":"T793","pred":"source","obj":"DLUT931"},{"subj":"T808","pred":"source","obj":"DLUT931"},{"subj":"T810","pred":"source","obj":"DLUT931"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T935","span":{"begin":0,"end":23},"obj":"Protein"},{"id":"T938","span":{"begin":33,"end":46},"obj":"Entity"}],"attributes":[{"subj":"T935","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T938","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T480","span":{"begin":0,"end":5},"obj":"NN"},{"id":"T481","span":{"begin":6,"end":14},"obj":"NN"},{"id":"T482","span":{"begin":15,"end":32},"obj":"JJ"},{"id":"T483","span":{"begin":33,"end":42},"obj":"NN"},{"id":"T484","span":{"begin":43,"end":46},"obj":"CD"},{"id":"T485","span":{"begin":47,"end":62},"obj":"NN"},{"id":"T486","span":{"begin":63,"end":65},"obj":"IN"},{"id":"T487","span":{"begin":66,"end":69},"obj":"CD"},{"id":"T488","span":{"begin":70,"end":77},"obj":"JJ"},{"id":"T489","span":{"begin":78,"end":87},"obj":"JJ"},{"id":"T490","span":{"begin":88,"end":95},"obj":"NN"},{"id":"T491","span":{"begin":96,"end":98},"obj":"IN"}],"relations":[{"id":"R288","pred":"amod","subj":"T482","obj":"T483"},{"id":"R290","pred":"nummod","subj":"T484","obj":"T485"},{"id":"R291","pred":"appos","subj":"T485","obj":"T483"},{"id":"R292","pred":"prep","subj":"T486","obj":"T485"},{"id":"R293","pred":"nummod","subj":"T487","obj":"T490"},{"id":"R294","pred":"amod","subj":"T488","obj":"T490"},{"id":"R295","pred":"amod","subj":"T489","obj":"T490"},{"id":"R296","pred":"pobj","subj":"T490","obj":"T486"},{"id":"R297","pred":"prep","subj":"T491","obj":"T485"}],"attributes":[{"subj":"T480","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T481","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T482","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T483","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T484","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T485","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T486","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T487","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T488","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T489","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T490","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T491","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T841","span":{"begin":0,"end":23},"obj":"Protein"},{"id":"T842","span":{"begin":66,"end":95},"obj":"Protein"},{"id":"T843","span":{"begin":47,"end":62},"obj":"Phosphorylation"},{"id":"T845","span":{"begin":24,"end":32},"obj":"Positive_regulation"}],"relations":[{"id":"R642","pred":"themeOf","subj":"T842","obj":"T843"},{"id":"R644","pred":"themeOf","subj":"T843","obj":"T845"},{"id":"R645","pred":"Cause","subj":"T845","obj":"T841"}],"attributes":[{"subj":"T841","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T842","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T843","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T845","pred":"source","obj":"bionlp-st-ge-2016-test-tees"}]},{"project":"testone","denotations":[{"id":"T17","span":{"begin":0,"end":23},"obj":"Protein"},{"id":"T18","span":{"begin":66,"end":69},"obj":"Protein"},{"id":"T33","span":{"begin":24,"end":32},"obj":"Positive_regulation"},{"id":"T34","span":{"begin":47,"end":62},"obj":"Phosphorylation"}],"relations":[{"id":"R1","pred":"causeOf","subj":"T17","obj":"T33"},{"id":"R2","pred":"themeOf","subj":"T18","obj":"T34"},{"id":"R11","pred":"themeOf","subj":"T34","obj":"T33"}],"attributes":[{"subj":"T17","pred":"source","obj":"testone"},{"subj":"T18","pred":"source","obj":"testone"},{"subj":"T33","pred":"source","obj":"testone"},{"subj":"T34","pred":"source","obj":"testone"}]},{"project":"test3","denotations":[{"id":"T49","span":{"begin":0,"end":23},"obj":"Protein"},{"id":"T50","span":{"begin":66,"end":69},"obj":"Protein"},{"id":"T65","span":{"begin":0,"end":23},"obj":"Protein"},{"id":"T66","span":{"begin":24,"end":32},"obj":"Positive_regulation"},{"id":"T67","span":{"begin":47,"end":62},"obj":"Phosphorylation"},{"id":"T68","span":{"begin":66,"end":69},"obj":"Protein"}],"relations":[{"id":"R16","pred":"causeOf","subj":"T65","obj":"T66"},{"id":"R17","pred":"themeOf","subj":"T67","obj":"T66"},{"id":"R18","pred":"themeOf","subj":"T68","obj":"T67"}],"attributes":[{"subj":"T49","pred":"source","obj":"test3"},{"subj":"T50","pred":"source","obj":"test3"},{"subj":"T65","pred":"source","obj":"test3"},{"subj":"T66","pred":"source","obj":"test3"},{"subj":"T67","pred":"source","obj":"test3"},{"subj":"T68","pred":"source","obj":"test3"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"pmc-enju-pas","color":"#eaec93","default":true},{"id":"bionlp-st-ge-2016-test-proteins","color":"#d493ec"},{"id":"bionlp-st-ge-2016-uniprot","color":"#93ecba"},{"id":"GO-BP","color":"#eca093"},{"id":"simple1","color":"#939fec"},{"id":"BioNLP16_DUT","color":"#b9ec93"},{"id":"BioNLP16_Messiy","color":"#ec93d3"},{"id":"DLUT931","color":"#93ecea"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#ecd093"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#b693ec"},{"id":"bionlp-st-ge-2016-test-tees","color":"#93ec9c"},{"id":"testone","color":"#ec93a3"},{"id":"test3","color":"#93bdec"}]}]}}