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PMC:3291650 / 856-1056 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T21 136-140 Protein denotes IRF3
T16 136-140 Protein denotes IRF3

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T215 191-193 IN denotes of
T214 180-190 NN denotes production
T213 170-179 VB denotes increased
T212 165-169 IN denotes with
T211 153-164 JJ denotes concomitant
T210 151-152 -COMMA- denotes ,
T209 141-151 NN denotes activation
T208 136-140 NN denotes IRF3
T207 132-135 CC denotes and
T206 126-131 NN denotes NF-κB
T205 117-125 VB denotes enhanced
T204 114-116 IN denotes by
T203 102-113 VB denotes illustrated
T202 99-101 IN denotes as
T201 97-98 -COMMA- denotes ,
T200 88-97 NN denotes infection
T199 84-87 NN denotes IAV
T198 80-83 CC denotes and
T197 76-79 NN denotes RNA
T196 67-75 JJ denotes stranded
T195 60-66 VB denotes double
T194 57-59 TO denotes to
T193 41-56 JJ denotes hyperresponsive
T192 36-40 VB denotes were
T191 24-35 NN denotes macrophages
T190 14-23 JJ denotes deficient
T189 10-13 NN denotes A20
R120 T191 T189 arg1Of macrophages,A20
R121 T191 T190 arg1Of macrophages,deficient
R122 T191 T192 arg1Of macrophages,were
R123 T191 T193 arg1Of macrophages,hyperresponsive
R124 T191 T195 arg1Of macrophages,double
R125 T192 T201 arg1Of were,","
R126 T192 T202 arg1Of were,as
R127 T193 T192 arg2Of hyperresponsive,were
R128 T195 T193 arg2Of double,hyperresponsive
R129 T195 T194 arg1Of double,to
R130 T197 T198 arg1Of RNA,and
R131 T199 T198 arg2Of IAV,and
R132 T200 T195 arg2Of infection,double
R133 T200 T196 arg1Of infection,stranded
R134 T200 T197 arg1Of infection,RNA
R135 T200 T199 arg1Of infection,IAV
R136 T203 T202 arg2Of illustrated,as
R137 T206 T205 arg2Of NF-κB,enhanced
R138 T206 T207 arg1Of NF-κB,and
R139 T207 T203 arg1Of and,illustrated
R140 T207 T204 arg2Of and,by
R141 T207 T210 arg1Of and,","
R142 T207 T211 arg1Of and,concomitant
R143 T209 T207 arg2Of activation,and
R144 T209 T208 arg1Of activation,IRF3
R145 T211 T212 arg1Of concomitant,with
R146 T214 T212 arg2Of production,with
R147 T214 T213 arg2Of production,increased
R148 T214 T215 arg1Of production,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T43 136-140 Protein denotes IRF3

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T541 136-140 http://www.uniprot.org/uniprot/Q14653 denotes IRF3
T538 10-13 http://www.uniprot.org/uniprot/P21580 denotes A20

simple1

Id Subject Object Predicate Lexical cue
T68 136-140 Protein denotes IRF3

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T610 136-140 Protein denotes IRF3
T613 141-151 Positive_regulation denotes activation
T614 117-125 Positive_regulation denotes enhanced
R508 T610 T613 themeOf IRF3,activation
R509 T613 T614 themeOf activation,enhanced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T548 141-151 Positive_regulation denotes activation
T545 136-140 Protein denotes IRF3
R499 T545 T548 themeOf IRF3,activation

DLUT931

Id Subject Object Predicate Lexical cue
T552 136-140 Protein denotes IRF3
T555 141-151 Positive_regulation denotes activation
T556 117-125 Positive_regulation denotes enhanced
R503 T552 T555 themeOf IRF3,activation
R504 T555 T556 themeOf activation,enhanced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T652 117-131 Positive_regulation denotes enhanced NF-κB
T646 136-140 Protein denotes IRF3
T619 117-131 Protein denotes enhanced NF-κB
T625 10-13 Protein denotes A20
T639 10-35 Entity denotes A20 deficient macrophages
R512 T619 T652 themeOf enhanced NF-κB,enhanced NF-κB

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T450 191-193 IN denotes of
T449 180-190 NN denotes production
T448 170-179 JJ denotes increased
T447 165-169 IN denotes with
T446 153-164 NN denotes concomitant
T445 151-152 , denotes ,
T444 141-151 NN denotes activation
T443 136-140 JJ denotes IRF3
T442 132-135 CC denotes and
T441 126-131 NN denotes NF-κB
T440 117-125 JJ denotes enhanced
T439 114-116 IN denotes by
T438 102-113 VBN denotes illustrated
T437 99-101 IN denotes as
T436 97-98 , denotes ,
T435 88-97 NN denotes infection
T434 84-87 NNP denotes IAV
T433 80-83 CC denotes and
T432 76-79 NNP denotes RNA
T431 67-75 VBN denotes stranded
T430 60-66 VB denotes double
T429 57-59 TO denotes to
T428 41-56 JJ denotes hyperresponsive
T427 36-40 VBD denotes were
T426 24-35 NNS denotes macrophages
T425 14-23 JJ denotes deficient
T424 10-13 CD denotes A20
T423 8-9 . denotes .
R344 T424 T426 nummod A20,macrophages
R345 T425 T426 amod deficient,macrophages
R346 T426 T427 nsubj macrophages,were
R347 T427 T427 ROOT were,were
R348 T428 T427 acomp hyperresponsive,were
R349 T429 T430 aux to,double
R350 T430 T428 xcomp double,hyperresponsive
R351 T431 T432 amod stranded,RNA
R352 T432 T430 dobj RNA,double
R353 T433 T432 cc and,RNA
R354 T434 T435 compound IAV,infection
R355 T435 T432 conj infection,RNA
R356 T436 T427 punct ",",were
R357 T437 T438 mark as,illustrated
R358 T438 T427 advcl illustrated,were
R359 T439 T438 agent by,illustrated
R360 T440 T441 amod enhanced,NF-κB
R361 T441 T439 pobj NF-κB,by
R362 T442 T441 cc and,NF-κB
R363 T443 T444 amod IRF3,activation
R364 T444 T441 conj activation,NF-κB
R365 T445 T444 punct ",",activation
R366 T446 T444 conj concomitant,activation
R367 T447 T441 prep with,NF-κB
R368 T448 T449 amod increased,production
R369 T449 T447 pobj production,with
R370 T450 T449 prep of,production

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T581 170-179 Positive_regulation denotes increased
T580 117-125 Positive_regulation denotes enhanced
T579 117-125 Positive_regulation denotes enhanced
T578 180-190 Gene_expression denotes production
T577 141-151 Positive_regulation denotes activation
T576 141-151 Positive_regulation denotes activation
T574 136-140 Protein denotes IRF3
T573 126-131 Protein denotes NF-κB
R461 T573 T576 themeOf NF-κB,activation
R462 T574 T577 themeOf IRF3,activation
R464 T576 T579 themeOf activation,enhanced
R465 T577 T580 themeOf activation,enhanced
R466 T578 T581 themeOf production,increased

testone

Id Subject Object Predicate Lexical cue
T11 14-23 Negative_regulation denotes deficient
T8 136-140 Protein denotes IRF3